RNA–Protein interactions for RNA: ENST00000562039.1

NSMCE1-203, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 260 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-203ENST00000562039 RHBGQ9H310 441 aa8.98□□□□□ -0.97
NSMCE1-203ENST00000562039 PRM3Q9NNZ6 103 aa8.98□□□□□ -0.97
NSMCE1-203ENST00000562039 SEMA3GQ9NS98 782 aa8.98□□□□□ -0.97
NSMCE1-203ENST00000562039 PLA2G3Q9NZ20 509 aa8.98□□□□□ -0.97
NSMCE1-203ENST00000562039 PTGFRNQ9P2B2 879 aa8.98□□□□□ -0.97
NSMCE1-203ENST00000562039 TXNDC16Q9P2K2 825 aa8.98□□□□□ -0.97
NSMCE1-203ENST00000562039 NXT1Q9UKK6 140 aaKnown RBP8.98□□□□□ -0.97
NSMCE1-203ENST00000562039 CORO1CQ9ULV4 474 aaPredicted RBP8.98□□□□□ -0.97
NSMCE1-203ENST00000562039 NSG1A0A0A6YYJ2 146 aa8.97□□□□□ -0.97
NSMCE1-203ENST00000562039 FAM159BA6NKW6 160 aa8.97□□□□□ -0.97
NSMCE1-203ENST00000562039 CYSRT1A8MQ03 144 aa8.97□□□□□ -0.97
NSMCE1-203ENST00000562039 VPS4BO75351 444 aa8.97□□□□□ -0.97
NSMCE1-203ENST00000562039 SEC24DO94855 1032 aaPredicted RBP8.97□□□□□ -0.97
NSMCE1-203ENST00000562039 SORBS2O94875 1100 aaKnown RBP8.97□□□□□ -0.97
NSMCE1-203ENST00000562039 WDR47O94967 919 aa8.97□□□□□ -0.97
NSMCE1-203ENST00000562039 IGHEP01854 428 aa8.97□□□□□ -0.97
NSMCE1-203ENST00000562039 ZNF888P0CJ79 500 aaPredicted RBP8.97□□□□□ -0.97
NSMCE1-203ENST00000562039 CCDC166P0CW27 439 aa8.97□□□□□ -0.97
NSMCE1-203ENST00000562039 COX6A1P12074 109 aa8.97□□□□□ -0.97
NSMCE1-203ENST00000562039 CXCR2P25025 360 aa8.97□□□□□ -0.97
NSMCE1-203ENST00000562039 GRK3P35626 688 aa8.97□□□□□ -0.97
NSMCE1-203ENST00000562039 XCR1P46094 333 aa8.97□□□□□ -0.97
NSMCE1-203ENST00000562039 AP1S2P56377 157 aa8.97□□□□□ -0.97
NSMCE1-203ENST00000562039 GUCY2DQ02846 1103 aa8.97□□□□□ -0.97
NSMCE1-203ENST00000562039 CKAP4Q07065 602 aaKnown RBP8.97□□□□□ -0.97
NSMCE1-203ENST00000562039 BMPR2Q13873 1038 aa8.97□□□□□ -0.97
NSMCE1-203ENST00000562039 FRG1Q14331 258 aaKnown RBP8.97□□□□□ -0.97
NSMCE1-203ENST00000562039 OR4D1Q15615 310 aa8.97□□□□□ -0.97
NSMCE1-203ENST00000562039 UAP1Q16222 522 aaPredicted RBP8.97□□□□□ -0.97
NSMCE1-203ENST00000562039 KBTBD12Q3ZCT8 623 aa8.97□□□□□ -0.97
NSMCE1-203ENST00000562039 DEFB134Q4QY38 66 aa8.97□□□□□ -0.97
NSMCE1-203ENST00000562039 IRAK1BP1Q5VVH5 260 aa8.97□□□□□ -0.97
NSMCE1-203ENST00000562039 GARNL3Q5VVW2 1013 aa8.97□□□□□ -0.97
NSMCE1-203ENST00000562039 B3GNTL1Q67FW5 361 aaPredicted RBP8.97□□□□□ -0.97
NSMCE1-203ENST00000562039 FCRLBQ6BAA4 426 aa8.97□□□□□ -0.97
NSMCE1-203ENST00000562039 TMEM214Q6NUQ4 689 aaKnown RBP8.97□□□□□ -0.97
NSMCE1-203ENST00000562039 ATCAYQ86WG3 371 aa8.97□□□□□ -0.97
NSMCE1-203ENST00000562039 ZADH2Q8N4Q0 377 aa8.97□□□□□ -0.97
NSMCE1-203ENST00000562039 CAMKVQ8NCB2 501 aa8.97□□□□□ -0.97
NSMCE1-203ENST00000562039 CATSPER1Q8NEC5 780 aa8.97□□□□□ -0.97
NSMCE1-203ENST00000562039 OR51Q1Q8NH59 317 aa8.97□□□□□ -0.97
NSMCE1-203ENST00000562039 UHMK1Q8TAS1 419 aaKnown RBP8.97□□□□□ -0.97
NSMCE1-203ENST00000562039 BRIX1Q8TDN6 353 aaKnown RBP8.97□□□□□ -0.97
NSMCE1-203ENST00000562039 CCT6BQ92526 530 aa8.97□□□□□ -0.97
NSMCE1-203ENST00000562039 CDKL2Q92772 493 aa8.97□□□□□ -0.97
NSMCE1-203ENST00000562039 RBBP8Q99708 897 aa8.97□□□□□ -0.97
NSMCE1-203ENST00000562039 RAB17Q9H0T7 212 aa8.97□□□□□ -0.97
NSMCE1-203ENST00000562039 KLHL31Q9H511 634 aa8.97□□□□□ -0.97
NSMCE1-203ENST00000562039 ANKHQ9HCJ1 492 aa8.97□□□□□ -0.97
NSMCE1-203ENST00000562039 LRRC4CQ9HCJ2 640 aa8.97□□□□□ -0.97
NSMCE1-203ENST00000562039 ASF1BQ9NVP2 202 aa8.97□□□□□ -0.97
NSMCE1-203ENST00000562039 WWOXQ9NZC7 414 aa8.97□□□□□ -0.97
NSMCE1-203ENST00000562039 VPS4AQ9UN37 437 aa8.97□□□□□ -0.97
NSMCE1-203ENST00000562039 NAALAD2Q9Y3Q0 740 aa8.97□□□□□ -0.97
NSMCE1-203ENST00000562039 MAP4K5Q9Y4K4 846 aa8.97□□□□□ -0.97
NSMCE1-203ENST00000562039 NUP210LQ5VU65 1888 aa8.97□□□□□ -0.97
NSMCE1-203ENST00000562039 SHANK1Q9Y566 2161 aa8.97□□□□□ -0.97
NSMCE1-203ENST00000562039 IGLV3-12A0A075B6K2 115 aa8.96□□□□□ -0.98
NSMCE1-203ENST00000562039 TXNDC9O14530 226 aa8.96□□□□□ -0.98
NSMCE1-203ENST00000562039 NDC80O14777 642 aa8.96□□□□□ -0.98
NSMCE1-203ENST00000562039 CLGNO14967 610 aa8.96□□□□□ -0.98
NSMCE1-203ENST00000562039 EIF3HO15372 352 aaKnown RBP eCLIP8.96□□□□□ -0.98
NSMCE1-203ENST00000562039 TAPBPO15533 448 aa8.96□□□□□ -0.98
NSMCE1-203ENST00000562039 PRPF4O43172 522 aaKnown RBP eCLIP8.96□□□□□ -0.986e-6■■■■□ 20.1
NSMCE1-203ENST00000562039 B4GALT2O60909 372 aa8.96□□□□□ -0.98
NSMCE1-203ENST00000562039 SH3BGRLO75368 114 aa8.96□□□□□ -0.98
NSMCE1-203ENST00000562039 BMP10O95393 424 aa8.96□□□□□ -0.98
NSMCE1-203ENST00000562039 HPP00738 406 aa8.96□□□□□ -0.98
NSMCE1-203ENST00000562039 C1QAP02745 245 aa8.96□□□□□ -0.98
NSMCE1-203ENST00000562039 ALPPP05187 535 aa8.96□□□□□ -0.98
NSMCE1-203ENST00000562039 ENO2P09104 434 aaPredicted RBP8.96□□□□□ -0.98
NSMCE1-203ENST00000562039 SLC35G6P0C7Q6 338 aa8.96□□□□□ -0.98
NSMCE1-203ENST00000562039 ITGAMP11215 1152 aa8.96□□□□□ -0.98
NSMCE1-203ENST00000562039 CD1DP15813 335 aa8.96□□□□□ -0.98
NSMCE1-203ENST00000562039 CCND1P24385 295 aa8.96□□□□□ -0.98
NSMCE1-203ENST00000562039 GP5P40197 560 aa8.96□□□□□ -0.98
NSMCE1-203ENST00000562039 HSPA7P48741 367 aa8.96□□□□□ -0.98
NSMCE1-203ENST00000562039 IRF9Q00978 393 aa8.96□□□□□ -0.98
NSMCE1-203ENST00000562039 SRSF1Q07955 248 aaKnown RBP eCLIP8.96□□□□□ -0.98
NSMCE1-203ENST00000562039 DLG1Q12959 904 aa8.96□□□□□ -0.98
NSMCE1-203ENST00000562039 EIF2S3LQ2VIR3 472 aaKnown RBP8.96□□□□□ -0.98
NSMCE1-203ENST00000562039 TOR1AIP1Q5JTV8 583 aa8.96□□□□□ -0.98
NSMCE1-203ENST00000562039 AGAP7PQ5VUJ5 663 aa8.96□□□□□ -0.98
NSMCE1-203ENST00000562039 ATG9BQ674R7 924 aa8.96□□□□□ -0.98
NSMCE1-203ENST00000562039 ADNP2Q6IQ32 1131 aa8.96□□□□□ -0.98
NSMCE1-203ENST00000562039 NXPE4Q6UWF7 544 aa8.96□□□□□ -0.98
NSMCE1-203ENST00000562039 RAPH1Q70E73 1250 aa8.96□□□□□ -0.98
NSMCE1-203ENST00000562039 CUZD1Q86UP6 607 aa8.96□□□□□ -0.98
NSMCE1-203ENST00000562039 GPSM1Q86YR5 675 aa8.96□□□□□ -0.98
NSMCE1-203ENST00000562039 SNX31Q8N9S9 440 aa8.96□□□□□ -0.98
NSMCE1-203ENST00000562039 ANKRD53Q8N9V6 530 aa8.96□□□□□ -0.98
NSMCE1-203ENST00000562039 NOA1Q8NC60 698 aaKnown RBP8.96□□□□□ -0.98
NSMCE1-203ENST00000562039 SREK1Q8WXA9 508 aaKnown RBP8.96□□□□□ -0.98
NSMCE1-203ENST00000562039 ATL1Q8WXF7 558 aa8.96□□□□□ -0.98
NSMCE1-203ENST00000562039 IFT81Q8WYA0 676 aa8.96□□□□□ -0.98
NSMCE1-203ENST00000562039 TSLPQ969D9 159 aa8.96□□□□□ -0.98
NSMCE1-203ENST00000562039 PNPLA2Q96AD5 504 aa8.96□□□□□ -0.98
NSMCE1-203ENST00000562039 SNRNP40Q96DI7 357 aaKnown RBP8.96□□□□□ -0.98
NSMCE1-203ENST00000562039 TM4SF19Q96DZ7 209 aa8.96□□□□□ -0.98
NSMCE1-203ENST00000562039 PDLIM5Q96HC4 596 aaKnown RBP8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms