RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 LMNAP02545 664 aaKnown RBP6.28□□□□□ -1.4
CAPN3-210ENST00000561817 SLC35G4P0C7Q5 338 aa6.28□□□□□ -1.4
CAPN3-210ENST00000561817 ACADMP11310 421 aa6.28□□□□□ -1.4
CAPN3-210ENST00000561817 PRPS2P11908 318 aa6.28□□□□□ -1.4
CAPN3-210ENST00000561817 EZRP15311 586 aaKnown RBP6.28□□□□□ -1.4
CAPN3-210ENST00000561817 SDC1P18827 310 aa6.28□□□□□ -1.4
CAPN3-210ENST00000561817 ME2P23368 584 aa6.28□□□□□ -1.4
CAPN3-210ENST00000561817 SLC6A2P23975 617 aa6.28□□□□□ -1.4
CAPN3-210ENST00000561817 RPL10P27635 214 aaKnown RBP6.28□□□□□ -1.4
CAPN3-210ENST00000561817 PTPN6P29350 595 aa6.28□□□□□ -1.4
CAPN3-210ENST00000561817 PKLRP30613 574 aa6.28□□□□□ -1.4
CAPN3-210ENST00000561817 HSD17B2P37059 387 aa6.28□□□□□ -1.4
CAPN3-210ENST00000561817 ARL1P40616 181 aaPredicted RBP6.28□□□□□ -1.4
CAPN3-210ENST00000561817 HNRNPFP52597 415 aaKnown RBP6.28□□□□□ -1.4
CAPN3-210ENST00000561817 DGKQP52824 942 aa6.28□□□□□ -1.4
CAPN3-210ENST00000561817 YPEL5P62699 121 aa6.28□□□□□ -1.4
CAPN3-210ENST00000561817 PRKG2Q13237 762 aa6.28□□□□□ -1.4
CAPN3-210ENST00000561817 MAD2L1Q13257 205 aaPredicted RBP6.28□□□□□ -1.4
CAPN3-210ENST00000561817 RCN1Q15293 331 aa6.28□□□□□ -1.4
CAPN3-210ENST00000561817 RPS6KA2Q15349 733 aa6.28□□□□□ -1.4
CAPN3-210ENST00000561817 RPE65Q16518 533 aa6.28□□□□□ -1.4
CAPN3-210ENST00000561817 ALG11Q2TAA5 492 aa6.28□□□□□ -1.4
CAPN3-210ENST00000561817 UAP1L1Q3KQV9 507 aa6.28□□□□□ -1.4
CAPN3-210ENST00000561817 C6orf10Q5SRN2 563 aa6.28□□□□□ -1.4
CAPN3-210ENST00000561817 SAMD5Q5TGI4 173 aa6.28□□□□□ -1.4
CAPN3-210ENST00000561817 C1orf146Q5VVC0 180 aa6.28□□□□□ -1.4
CAPN3-210ENST00000561817 KIAA0895LQ68EN5 471 aa6.28□□□□□ -1.4
CAPN3-210ENST00000561817 GALNT18Q6P9A2 607 aa6.28□□□□□ -1.4
CAPN3-210ENST00000561817 AAGABQ6PD74 315 aa6.28□□□□□ -1.4
CAPN3-210ENST00000561817 ABRAXAS1Q6UWZ7 409 aa6.28□□□□□ -1.4
CAPN3-210ENST00000561817 CHST15Q7LFX5 561 aaPredicted RBP6.28□□□□□ -1.4
CAPN3-210ENST00000561817 MSRB3Q8IXL7 192 aa6.28□□□□□ -1.4
CAPN3-210ENST00000561817 SYTL1Q8IYJ3 562 aa6.28□□□□□ -1.4
CAPN3-210ENST00000561817 KIAA2013Q8IYS2 634 aa6.28□□□□□ -1.4
CAPN3-210ENST00000561817 LIX1Q8N485 282 aa6.28□□□□□ -1.4
CAPN3-210ENST00000561817 KRTCAP2Q8N6L1 136 aa6.28□□□□□ -1.4
CAPN3-210ENST00000561817 FRMD1Q8N878 549 aa6.28□□□□□ -1.4
CAPN3-210ENST00000561817 PCYOX1LQ8NBM8 494 aa6.28□□□□□ -1.4
CAPN3-210ENST00000561817 GLB1L3Q8NCI6 653 aaPredicted RBP6.28□□□□□ -1.4
CAPN3-210ENST00000561817 ZNF740Q8NDX6 193 aa6.28□□□□□ -1.4
CAPN3-210ENST00000561817 ABHD11Q8NFV4 315 aa6.28□□□□□ -1.4
CAPN3-210ENST00000561817 HUS1BQ8NHY5 278 aa6.28□□□□□ -1.4
CAPN3-210ENST00000561817 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.28□□□□□ -1.4
CAPN3-210ENST00000561817 CHTF18Q8WVB6 975 aa6.28□□□□□ -1.4
CAPN3-210ENST00000561817 HMGB4Q8WW32 186 aa6.28□□□□□ -1.4
CAPN3-210ENST00000561817 NRG4Q8WWG1 115 aa6.28□□□□□ -1.4
CAPN3-210ENST00000561817 SLC5A11Q8WWX8 675 aa6.28□□□□□ -1.4
CAPN3-210ENST00000561817 TMEM125Q96AQ2 219 aa6.28□□□□□ -1.4
CAPN3-210ENST00000561817 LRRC58Q96CX6 371 aa6.28□□□□□ -1.4
CAPN3-210ENST00000561817 EAF1Q96JC9 268 aaPredicted RBP6.28□□□□□ -1.4
CAPN3-210ENST00000561817 WDR92Q96MX6 357 aa6.28□□□□□ -1.4
CAPN3-210ENST00000561817 CAMK1GQ96NX5 476 aa6.28□□□□□ -1.4
CAPN3-210ENST00000561817 OR2M4Q96R27 311 aa6.28□□□□□ -1.4
CAPN3-210ENST00000561817 MYOCQ99972 504 aa6.28□□□□□ -1.4
CAPN3-210ENST00000561817 HOPXQ9BPY8 73 aaPredicted RBP6.28□□□□□ -1.4
CAPN3-210ENST00000561817 SLC39A3Q9BRY0 314 aa6.28□□□□□ -1.4
CAPN3-210ENST00000561817 EFCAB11Q9BUY7 163 aa6.28□□□□□ -1.4
CAPN3-210ENST00000561817 RHBGQ9H310 441 aa6.28□□□□□ -1.4
CAPN3-210ENST00000561817 TRIT1Q9H3H1 467 aaKnown RBP6.28□□□□□ -1.4
CAPN3-210ENST00000561817 PELI2Q9HAT8 420 aa6.28□□□□□ -1.4
CAPN3-210ENST00000561817 S100A14Q9HCY8 104 aa6.28□□□□□ -1.4
CAPN3-210ENST00000561817 LTB4R2Q9NPC1 389 aa6.28□□□□□ -1.4
CAPN3-210ENST00000561817 SERHLQ9NQF3 203 aa6.28□□□□□ -1.4
CAPN3-210ENST00000561817 CCDC177Q9NQR7 707 aaPredicted RBP6.28□□□□□ -1.4
CAPN3-210ENST00000561817 SLAMF8Q9P0V8 285 aa6.28□□□□□ -1.4
CAPN3-210ENST00000561817 SUCOQ9UBS9 1254 aaKnown RBP6.28□□□□□ -1.4
CAPN3-210ENST00000561817 WNT16Q9UBV4 365 aa6.28□□□□□ -1.4
CAPN3-210ENST00000561817 LEF1Q9UJU2 399 aaPredicted RBP6.28□□□□□ -1.4
CAPN3-210ENST00000561817 ICKQ9UPZ9 632 aa6.28□□□□□ -1.4
CAPN3-210ENST00000561817 EXO1Q9UQ84 846 aaKnown RBP6.28□□□□□ -1.4
CAPN3-210ENST00000561817 EIF3LQ9Y262 564 aaKnown RBP6.28□□□□□ -1.4
CAPN3-210ENST00000561817 TMED5Q9Y3A6 229 aa6.28□□□□□ -1.4
CAPN3-210ENST00000561817 CFAP20Q9Y6A4 193 aaKnown RBP6.28□□□□□ -1.4
CAPN3-210ENST00000561817 SLCO1B1Q9Y6L6 691 aa6.28□□□□□ -1.4
CAPN3-210ENST00000561817 CEP192Q8TEP8 1941 aa6.28□□□□□ -1.4
CAPN3-210ENST00000561817 EML5Q05BV3 1969 aa6.27□□□□□ -1.4
CAPN3-210ENST00000561817 NCOR1O75376 2440 aa6.27□□□□□ -1.41
CAPN3-210ENST00000561817 IGHV1OR15-9A0A0B4J2B8 117 aa6.27□□□□□ -1.41
CAPN3-210ENST00000561817 IGKV1-8A0A0C4DH67 115 aa6.27□□□□□ -1.41
CAPN3-210ENST00000561817 PIPSLA2A3N6 862 aa6.27□□□□□ -1.41
CAPN3-210ENST00000561817 CCDC154A6NI56 674 aa6.27□□□□□ -1.41
CAPN3-210ENST00000561817 VSTM5A8MXK1 200 aa6.27□□□□□ -1.41
CAPN3-210ENST00000561817 MAGEB17A8MXT2 336 aa6.27□□□□□ -1.41
CAPN3-210ENST00000561817 C1QTNF9BB2RNN3 333 aa6.27□□□□□ -1.41
CAPN3-210ENST00000561817 ANGPT2O15123 496 aa6.27□□□□□ -1.41
CAPN3-210ENST00000561817 CFLARO15519 480 aa6.27□□□□□ -1.41
CAPN3-210ENST00000561817 SCN2BO60939 215 aa6.27□□□□□ -1.41
CAPN3-210ENST00000561817 FKBP6O75344 327 aa6.27□□□□□ -1.41
CAPN3-210ENST00000561817 NPPAP01160 153 aa6.27□□□□□ -1.41
CAPN3-210ENST00000561817 CAPNS1P04632 268 aa6.27□□□□□ -1.41
CAPN3-210ENST00000561817 RPN2P04844 631 aa6.27□□□□□ -1.41
CAPN3-210ENST00000561817 DCNP07585 359 aaKnown RBP6.27□□□□□ -1.41
CAPN3-210ENST00000561817 HNRNPCP07910 306 aaKnown RBP eCLIP6.27□□□□□ -1.41
CAPN3-210ENST00000561817 FURINP09958 794 aa6.27□□□□□ -1.41
CAPN3-210ENST00000561817 MTHFD1P11586 935 aaKnown RBP6.27□□□□□ -1.41
CAPN3-210ENST00000561817 CDH1P12830 882 aa6.27□□□□□ -1.41
CAPN3-210ENST00000561817 HSD17B1P14061 328 aa6.27□□□□□ -1.41
CAPN3-210ENST00000561817 ANPEPP15144 967 aa6.27□□□□□ -1.41
CAPN3-210ENST00000561817 PCSK2P16519 638 aa6.27□□□□□ -1.41
CAPN3-210ENST00000561817 IDSP22304 550 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms