RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 PRMT7Q9NVM4 692 aaPredicted RBP3.49□□□□□ -1.85
HERC1-215ENST00000561436 FAM118AQ9NWS6 357 aa3.49□□□□□ -1.85
HERC1-215ENST00000561436 TBC1D7Q9P0N9 293 aa3.49□□□□□ -1.85
HERC1-215ENST00000561436 GTF3C4Q9UKN8 822 aa3.49□□□□□ -1.85
HERC1-215ENST00000561436 STX8Q9UNK0 236 aa3.49□□□□□ -1.85
HERC1-215ENST00000561436 EXOC6BQ9Y2D4 811 aa3.49□□□□□ -1.85
HERC1-215ENST00000561436 ECM29Q5VYK3 1845 aa3.49□□□□□ -1.85
HERC1-215ENST00000561436 ZMYM6O95789 1325 aa3.48□□□□□ -1.85
HERC1-215ENST00000561436 IGLV5-45A0A087WSX0 123 aa3.48□□□□□ -1.85
HERC1-215ENST00000561436 A0A1W2PPI3 338 aa3.48□□□□□ -1.85
HERC1-215ENST00000561436 ANXA2P2A6NMY6 339 aa3.48□□□□□ -1.85
HERC1-215ENST00000561436 C16orf97H3BN30 126 aa3.48□□□□□ -1.85
HERC1-215ENST00000561436 TRIM77I1YAP6 450 aa3.48□□□□□ -1.85
HERC1-215ENST00000561436 CAPN9O14815 690 aa3.48□□□□□ -1.85
HERC1-215ENST00000561436 RNASEH1O60930 286 aaKnown RBP3.48□□□□□ -1.85
HERC1-215ENST00000561436 IGHV4-39P01824 125 aa3.48□□□□□ -1.85
HERC1-215ENST00000561436 ATP1A1P05023 1023 aaKnown RBP3.48□□□□□ -1.85
HERC1-215ENST00000561436 ATP5BP06576 529 aaKnown RBP3.48□□□□□ -1.85
HERC1-215ENST00000561436 INHBAP08476 426 aa3.48□□□□□ -1.85
HERC1-215ENST00000561436 OR52Z1P0C646 297 aa3.48□□□□□ -1.85
HERC1-215ENST00000561436 SAGP10523 405 aaPredicted RBP3.48□□□□□ -1.85
HERC1-215ENST00000561436 CALML3P27482 149 aa3.48□□□□□ -1.85
HERC1-215ENST00000561436 BRWD1-AS2P59051 145 aa3.48□□□□□ -1.85
HERC1-215ENST00000561436 IRX6P78412 446 aaPredicted RBP3.48□□□□□ -1.85
HERC1-215ENST00000561436 CX3CL1P78423 397 aa3.48□□□□□ -1.85
HERC1-215ENST00000561436 RUNX1T1Q06455 604 aa3.48□□□□□ -1.85
HERC1-215ENST00000561436 HYAL1Q12794 435 aa3.48□□□□□ -1.85
HERC1-215ENST00000561436 GIT2Q14161 759 aa3.48□□□□□ -1.85
HERC1-215ENST00000561436 ZNF273Q14593 569 aa3.48□□□□□ -1.85
HERC1-215ENST00000561436 KIR2DS3Q14952 304 aa3.48□□□□□ -1.85
HERC1-215ENST00000561436 TAF13Q15543 124 aa3.48□□□□□ -1.85
HERC1-215ENST00000561436 ELFN2Q5R3F8 820 aa3.48□□□□□ -1.85
HERC1-215ENST00000561436 CELF3Q5SZQ8 465 aaKnown RBP3.48□□□□□ -1.85
HERC1-215ENST00000561436 SFMBT2Q5VUG0 894 aa3.48□□□□□ -1.85
HERC1-215ENST00000561436 ARHGEF16Q5VV41 709 aa3.48□□□□□ -1.85
HERC1-215ENST00000561436 CAPRIN2Q6IMN6 1127 aaKnown RBP3.48□□□□□ -1.85
HERC1-215ENST00000561436 PLXDC2Q6UX71 529 aa3.48□□□□□ -1.85
HERC1-215ENST00000561436 STOX1Q6ZVD7 989 aa3.48□□□□□ -1.85
HERC1-215ENST00000561436 PIWIL4Q7Z3Z4 852 aaKnown RBP3.48□□□□□ -1.85
HERC1-215ENST00000561436 SPATA21Q7Z572 469 aa3.48□□□□□ -1.85
HERC1-215ENST00000561436 PHLDB2Q86SQ0 1253 aa3.48□□□□□ -1.85
HERC1-215ENST00000561436 SLC9B2Q86UD5 537 aa3.48□□□□□ -1.85
HERC1-215ENST00000561436 MYOCDQ8IZQ8 938 aa3.48□□□□□ -1.85
HERC1-215ENST00000561436 OR8H3Q8N146 312 aa3.48□□□□□ -1.85
HERC1-215ENST00000561436 CCAR2Q8N163 923 aaKnown RBP3.48□□□□□ -1.85
HERC1-215ENST00000561436 CPSF7Q8N684 471 aaKnown RBP3.48□□□□□ -1.85
HERC1-215ENST00000561436 OR5M8Q8NGP6 311 aa3.48□□□□□ -1.85
HERC1-215ENST00000561436 RNF128Q8TEB7 428 aa3.48□□□□□ -1.85
HERC1-215ENST00000561436 ATP8B4Q8TF62 1192 aa3.48□□□□□ -1.85
HERC1-215ENST00000561436 STAMBPL1Q96FJ0 436 aa3.48□□□□□ -1.85
HERC1-215ENST00000561436 SCRN2Q96FV2 425 aa3.48□□□□□ -1.85
HERC1-215ENST00000561436 HES6Q96HZ4 224 aa3.48□□□□□ -1.85
HERC1-215ENST00000561436 NSL1Q96IY1 281 aa3.48□□□□□ -1.85
HERC1-215ENST00000561436 CDHR1Q96JP9 859 aa3.48□□□□□ -1.85
HERC1-215ENST00000561436 LRRC3BQ96PB8 259 aa3.48□□□□□ -1.85
HERC1-215ENST00000561436 THUMPD3Q9BV44 507 aaKnown RBP3.48□□□□□ -1.85
HERC1-215ENST00000561436 IL1RAPL2Q9NP60 686 aa3.48□□□□□ -1.85
HERC1-215ENST00000561436 ACKR4Q9NPB9 350 aa3.48□□□□□ -1.85
HERC1-215ENST00000561436 GKN1Q9NS71 199 aa3.48□□□□□ -1.85
HERC1-215ENST00000561436 ARGLU1Q9NWB6 273 aaPredicted RBP3.48□□□□□ -1.85
HERC1-215ENST00000561436 OSER1Q9NX31 292 aa3.48□□□□□ -1.85
HERC1-215ENST00000561436 SPHK1Q9NYA1 384 aa3.48□□□□□ -1.85
HERC1-215ENST00000561436 MUTYHQ9UIF7 546 aa3.48□□□□□ -1.85
HERC1-215ENST00000561436 SNX7Q9UNH6 387 aa3.48□□□□□ -1.85
HERC1-215ENST00000561436 JRKLQ9Y4A0 524 aa3.48□□□□□ -1.85
HERC1-215ENST00000561436 LIPGQ9Y5X9 500 aa3.48□□□□□ -1.85
HERC1-215ENST00000561436 POMT1Q9Y6A1 747 aa3.48□□□□□ -1.85
HERC1-215ENST00000561436 COL4A6Q14031 1691 aa3.48□□□□□ -1.85
HERC1-215ENST00000561436 DOCK1Q14185 1865 aa3.47□□□□□ -1.85
HERC1-215ENST00000561436 ADGRA3Q8IWK6 1321 aa3.47□□□□□ -1.85
HERC1-215ENST00000561436 TRAV34A0A0B4J273 112 aa3.47□□□□□ -1.85
HERC1-215ENST00000561436 MBLAC1A4D2B0 266 aaPredicted RBP3.47□□□□□ -1.85
HERC1-215ENST00000561436 SPRY1O43609 319 aaPredicted RBP3.47□□□□□ -1.85
HERC1-215ENST00000561436 LUC7L3O95232 432 aaKnown RBP3.47□□□□□ -1.85
HERC1-215ENST00000561436 SLU7O95391 586 aaKnown RBP3.47□□□□□ -1.85
HERC1-215ENST00000561436 GCNT3O95395 438 aa3.47□□□□□ -1.85
HERC1-215ENST00000561436 MOCS3O95396 460 aa3.47□□□□□ -1.85
HERC1-215ENST00000561436 PDHBP11177 359 aa3.47□□□□□ -1.85
HERC1-215ENST00000561436 CDC25CP30307 473 aa3.47□□□□□ -1.85
HERC1-215ENST00000561436 CTNNB1P35222 781 aa3.47□□□□□ -1.85
HERC1-215ENST00000561436 NR2C2P49116 596 aa3.47□□□□□ -1.85
HERC1-215ENST00000561436 SLC26A2P50443 739 aa3.47□□□□□ -1.85
HERC1-215ENST00000561436 FUT6P51993 359 aa3.47□□□□□ -1.85
HERC1-215ENST00000561436 MBTD1Q05BQ5 628 aa3.47□□□□□ -1.85
HERC1-215ENST00000561436 CUL3Q13618 768 aa3.47□□□□□ -1.85
HERC1-215ENST00000561436 KLHL26Q53HC5 615 aa3.47□□□□□ -1.85
HERC1-215ENST00000561436 GRTP1Q5TC63 336 aa3.47□□□□□ -1.85
HERC1-215ENST00000561436 SHQ1Q6PI26 577 aaKnown RBP3.47□□□□□ -1.85
HERC1-215ENST00000561436 ENPP7Q6UWV6 458 aa3.47□□□□□ -1.85
HERC1-215ENST00000561436 PRSS57Q6UWY2 283 aa3.47□□□□□ -1.85
HERC1-215ENST00000561436 METTL7BQ6UX53 244 aa3.47□□□□□ -1.85
HERC1-215ENST00000561436 MSANTD1Q6ZTZ1 278 aa3.47□□□□□ -1.85
HERC1-215ENST00000561436 RBM23Q86U06 439 aaKnown RBP3.47□□□□□ -1.85
HERC1-215ENST00000561436 NR2C2APQ86WQ0 139 aa3.47□□□□□ -1.85
HERC1-215ENST00000561436 IQCA1Q86XH1 822 aa3.47□□□□□ -1.85
HERC1-215ENST00000561436 C4orf19Q8IY42 314 aa3.47□□□□□ -1.85
HERC1-215ENST00000561436 TIGD4Q8IY51 512 aa3.47□□□□□ -1.85
HERC1-215ENST00000561436 SSMEM1Q8WWF3 244 aa3.47□□□□□ -1.85
HERC1-215ENST00000561436 SORCS1Q8WY21 1168 aa3.47□□□□□ -1.85
HERC1-215ENST00000561436 ESR2Q92731 530 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms