RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 JAK1P23458 1154 aa10.22□□□□□ -0.77
TPM1-229ENST00000561242 VARSP26640 1264 aaKnown RBP10.22□□□□□ -0.77
TPM1-229ENST00000561242 GCAP28676 217 aa10.22□□□□□ -0.77
TPM1-229ENST00000561242 SCTRP47872 440 aa10.22□□□□□ -0.77
TPM1-229ENST00000561242 AGTR2P50052 363 aa10.22□□□□□ -0.77
TPM1-229ENST00000561242 PKNOX1P55347 436 aa10.22□□□□□ -0.77
TPM1-229ENST00000561242 CXADRP78310 365 aa10.22□□□□□ -0.77
TPM1-229ENST00000561242 REEP5Q00765 189 aa10.22□□□□□ -0.77
TPM1-229ENST00000561242 CLCQ05315 142 aa10.22□□□□□ -0.77
TPM1-229ENST00000561242 SLC18A2Q05940 514 aa10.22□□□□□ -0.77
TPM1-229ENST00000561242 FAM53BQ14153 422 aa10.22□□□□□ -0.77
TPM1-229ENST00000561242 C18orf21Q32NC0 220 aaPredicted RBP10.22□□□□□ -0.77
TPM1-229ENST00000561242 TMEM35AQ53FP2 167 aa10.22□□□□□ -0.77
TPM1-229ENST00000561242 SGO1Q5FBB7 561 aa10.22□□□□□ -0.77
TPM1-229ENST00000561242 TOR1AIP1Q5JTV8 583 aa10.22□□□□□ -0.77
TPM1-229ENST00000561242 LIPMQ5VYY2 423 aa10.22□□□□□ -0.77
TPM1-229ENST00000561242 FRMPD2BQ6IN97 320 aa10.22□□□□□ -0.77
TPM1-229ENST00000561242 GRHL2Q6ISB3 625 aa10.22□□□□□ -0.77
TPM1-229ENST00000561242 CYP20A1Q6UW02 462 aa10.22□□□□□ -0.77
TPM1-229ENST00000561242 SLCO4C1Q6ZQN7 724 aa10.22□□□□□ -0.77
TPM1-229ENST00000561242 GPRIN3Q6ZVF9 776 aa10.22□□□□□ -0.77
TPM1-229ENST00000561242 PAGE2Q7Z2X7 111 aa10.22□□□□□ -0.77
TPM1-229ENST00000561242 PROSER1Q86XN7 944 aa10.22□□□□□ -0.77
TPM1-229ENST00000561242 KLHDC8AQ8IYD2 350 aa10.22□□□□□ -0.77
TPM1-229ENST00000561242 LRRC56Q8IYG6 542 aaPredicted RBP10.22□□□□□ -0.77
TPM1-229ENST00000561242 OR4N4Q8N0Y3 316 aa10.22□□□□□ -0.77
TPM1-229ENST00000561242 CYP4X1Q8N118 509 aa10.22□□□□□ -0.77
TPM1-229ENST00000561242 ANKRD42Q8N9B4 389 aa10.22□□□□□ -0.77
TPM1-229ENST00000561242 KDF1Q8NAX2 398 aaPredicted RBP10.22□□□□□ -0.77
TPM1-229ENST00000561242 OR4K1Q8NGD4 311 aa10.22□□□□□ -0.77
TPM1-229ENST00000561242 METTL6Q8TCB7 284 aa10.22□□□□□ -0.77
TPM1-229ENST00000561242 SELENOMQ8WWX9 145 aa10.22□□□□□ -0.77
TPM1-229ENST00000561242 NKD1Q969G9 470 aa10.22□□□□□ -0.77
TPM1-229ENST00000561242 CNDP1Q96KN2 507 aa10.22□□□□□ -0.77
TPM1-229ENST00000561242 CNTNAP3BQ96NU0 1288 aa10.22□□□□□ -0.77
TPM1-229ENST00000561242 CATSPER2Q96P56 530 aa10.22□□□□□ -0.77
TPM1-229ENST00000561242 FAM111AQ96PZ2 611 aa10.22□□□□□ -0.77
TPM1-229ENST00000561242 SERPINI1Q99574 410 aa10.22□□□□□ -0.77
TPM1-229ENST00000561242 TRMOQ9BU70 441 aa10.22□□□□□ -0.77
TPM1-229ENST00000561242 CNTNAP3Q9BZ76 1288 aa10.22□□□□□ -0.77
TPM1-229ENST00000561242 REXO4Q9GZR2 422 aaKnown RBP10.22□□□□□ -0.77
TPM1-229ENST00000561242 EPB41L4BQ9H329 900 aa10.22□□□□□ -0.77
TPM1-229ENST00000561242 VIPAS39Q9H9C1 493 aa10.22□□□□□ -0.77
TPM1-229ENST00000561242 CLK4Q9HAZ1 481 aaKnown RBP10.22□□□□□ -0.77
TPM1-229ENST00000561242 C19orf25Q9UFG5 118 aaPredicted RBP10.22□□□□□ -0.77
TPM1-229ENST00000561242 CROTQ9UKG9 612 aa10.22□□□□□ -0.77
TPM1-229ENST00000561242 PILRAQ9UKJ1 303 aa10.22□□□□□ -0.77
TPM1-229ENST00000561242 IKZF3Q9UKT9 509 aa10.22□□□□□ -0.77
TPM1-229ENST00000561242 ZMIZ1Q9ULJ6 1067 aa10.22□□□□□ -0.77
TPM1-229ENST00000561242 WASF3Q9UPY6 502 aa10.22□□□□□ -0.77
TPM1-229ENST00000561242 RUVBL1Q9Y265 456 aaKnown RBP10.22□□□□□ -0.77
TPM1-229ENST00000561242 PLLPQ9Y342 182 aa10.22□□□□□ -0.77
TPM1-229ENST00000561242 PTRH2Q9Y3E5 179 aaKnown RBP10.22□□□□□ -0.77
TPM1-229ENST00000561242 PCDHGA4Q9Y5G9 962 aa10.22□□□□□ -0.77
TPM1-229ENST00000561242 MAU2Q9Y6X3 613 aa10.22□□□□□ -0.77
TPM1-229ENST00000561242 PIEZO1Q92508 2521 aa10.22□□□□□ -0.77
TPM1-229ENST00000561242 A8MT66 165 aa10.21□□□□□ -0.77
TPM1-229ENST00000561242 H0YIG0 161 aa10.21□□□□□ -0.77
TPM1-229ENST00000561242 PLIN3O60664 434 aa10.21□□□□□ -0.77
TPM1-229ENST00000561242 CTSVO60911 334 aa10.21□□□□□ -0.77
TPM1-229ENST00000561242 ULK1O75385 1050 aa10.21□□□□□ -0.77
TPM1-229ENST00000561242 SNUPNO95149 360 aaKnown RBP10.21□□□□□ -0.77
TPM1-229ENST00000561242 SIX3O95343 332 aaPredicted RBP10.21□□□□□ -0.77
TPM1-229ENST00000561242 ALBP02768 609 aa10.21□□□□□ -0.77
TPM1-229ENST00000561242 ENO1P06733 434 aaKnown RBP10.21□□□□□ -0.77
TPM1-229ENST00000561242 ALOX12P18054 663 aa10.21□□□□□ -0.77
TPM1-229ENST00000561242 IL10P22301 178 aa10.21□□□□□ -0.77
TPM1-229ENST00000561242 PTPN4P29074 926 aa10.21□□□□□ -0.77
TPM1-229ENST00000561242 BCL6P41182 706 aa10.21□□□□□ -0.77
TPM1-229ENST00000561242 STAT5AP42229 794 aa10.21□□□□□ -0.77
TPM1-229ENST00000561242 KCNC1P48547 511 aa10.21□□□□□ -0.77
TPM1-229ENST00000561242 NAGLUP54802 743 aa10.21□□□□□ -0.77
TPM1-229ENST00000561242 RRADP55042 308 aa10.21□□□□□ -0.77
TPM1-229ENST00000561242 DNAJB13P59910 316 aa10.21□□□□□ -0.77
TPM1-229ENST00000561242 AP2B1P63010 937 aa10.21□□□□□ -0.77
TPM1-229ENST00000561242 BTN3A2P78410 334 aa10.21□□□□□ -0.77
TPM1-229ENST00000561242 ACTN3Q08043 901 aaPredicted RBP10.21□□□□□ -0.77
TPM1-229ENST00000561242 VAC14Q08AM6 782 aa10.21□□□□□ -0.77
TPM1-229ENST00000561242 LCP2Q13094 533 aa10.21□□□□□ -0.77
TPM1-229ENST00000561242 SPDYAQ5MJ70 313 aa10.21□□□□□ -0.77
TPM1-229ENST00000561242 ATG16L1Q676U5 607 aa10.21□□□□□ -0.77
TPM1-229ENST00000561242 SYVN1Q86TM6 617 aa10.21□□□□□ -0.77
TPM1-229ENST00000561242 SPACA3Q8IXA5 215 aa10.21□□□□□ -0.77
TPM1-229ENST00000561242 DSELQ8IZU8 1212 aa10.21□□□□□ -0.77
TPM1-229ENST00000561242 IQCKQ8N0W5 287 aa10.21□□□□□ -0.77
TPM1-229ENST00000561242 METTL27Q8N6F8 245 aaPredicted RBP10.21□□□□□ -0.77
TPM1-229ENST00000561242 FLVCR1-AS1Q8TAF5 88 aa10.21□□□□□ -0.77
TPM1-229ENST00000561242 TCP10LQ8TDR4 215 aa10.21□□□□□ -0.77
TPM1-229ENST00000561242 ADAMTS18Q8TE60 1221 aa10.21□□□□□ -0.77
TPM1-229ENST00000561242 RGMAQ96B86 450 aa10.21□□□□□ -0.77
TPM1-229ENST00000561242 MTFMTQ96DP5 389 aaKnown RBP10.21□□□□□ -0.77
TPM1-229ENST00000561242 GPR78Q96P69 363 aa10.21□□□□□ -0.77
TPM1-229ENST00000561242 KCNC2Q96PR1 638 aa10.21□□□□□ -0.77
TPM1-229ENST00000561242 OR2A5Q96R48 311 aa10.21□□□□□ -0.77
TPM1-229ENST00000561242 OR4K3Q96R72 315 aa10.21□□□□□ -0.77
TPM1-229ENST00000561242 TMEM79Q9BSE2 394 aa10.21□□□□□ -0.77
TPM1-229ENST00000561242 CHST8Q9H2A9 424 aa10.21□□□□□ -0.77
TPM1-229ENST00000561242 SSU72Q9NP77 194 aaKnown RBP10.21□□□□□ -0.77
TPM1-229ENST00000561242 MID1IP1Q9NPA3 183 aa10.21□□□□□ -0.77
TPM1-229ENST00000561242 MKKSQ9NPJ1 570 aaPredicted RBP10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms