RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 R3HDM2Q9Y2K5 976 aaKnown RBP9.33□□□□□ -0.92
TPM1-225ENST00000560679 COL6A5A8TX70 2615 aa9.33□□□□□ -0.92
TPM1-225ENST00000560679 KIAA1324LA8MWY0 1029 aaPredicted RBP9.32□□□□□ -0.92
TPM1-225ENST00000560679 PROM1O43490 865 aa9.32□□□□□ -0.92
TPM1-225ENST00000560679 VPS26AO75436 327 aa9.32□□□□□ -0.92
TPM1-225ENST00000560679 ERGP11308 486 aa9.32□□□□□ -0.92
TPM1-225ENST00000560679 RFC3P40938 356 aa9.32□□□□□ -0.92
TPM1-225ENST00000560679 DLX5P56178 289 aa9.32□□□□□ -0.92
TPM1-225ENST00000560679 OC90Q02509 493 aaPredicted RBP9.32□□□□□ -0.92
TPM1-225ENST00000560679 MAPKAPK3Q16644 382 aa9.32□□□□□ -0.92
TPM1-225ENST00000560679 MINDY4Q4G0A6 757 aa9.32□□□□□ -0.92
TPM1-225ENST00000560679 CMPK2Q5EBM0 449 aa9.32□□□□□ -0.92
TPM1-225ENST00000560679 EMC4Q5J8M3 183 aa9.32□□□□□ -0.92
TPM1-225ENST00000560679 ZNF425Q6IV72 752 aa9.32□□□□□ -0.92
TPM1-225ENST00000560679 C11orf63Q6NUN7 778 aa9.32□□□□□ -0.92
TPM1-225ENST00000560679 HDXQ7Z353 690 aa9.32□□□□□ -0.92
TPM1-225ENST00000560679 CDKL3Q8IVW4 592 aaPredicted RBP9.32□□□□□ -0.92
TPM1-225ENST00000560679 FAM98AQ8NCA5 519 aaKnown RBP9.32□□□□□ -0.92
TPM1-225ENST00000560679 OR9A4Q8NGU2 314 aa9.32□□□□□ -0.92
TPM1-225ENST00000560679 M1APQ8TC57 530 aa9.32□□□□□ -0.92
TPM1-225ENST00000560679 METTL21AQ8WXB1 218 aa9.32□□□□□ -0.92
TPM1-225ENST00000560679 NANOS1Q8WY41 292 aaKnown RBP9.32□□□□□ -0.92
TPM1-225ENST00000560679 KRT35Q92764 455 aa9.32□□□□□ -0.92
TPM1-225ENST00000560679 GPATCH1Q9BRR8 931 aaKnown RBP9.32□□□□□ -0.92
TPM1-225ENST00000560679 KCNJ16Q9NPI9 418 aa9.32□□□□□ -0.92
TPM1-225ENST00000560679 LRFN1Q9P244 771 aa9.32□□□□□ -0.92
TPM1-225ENST00000560679 SLC2A6Q9UGQ3 507 aa9.32□□□□□ -0.92
TPM1-225ENST00000560679 AMFRQ9UKV5 643 aa9.32□□□□□ -0.92
TPM1-225ENST00000560679 PACSIN2Q9UNF0 486 aaPredicted RBP9.32□□□□□ -0.92
TPM1-225ENST00000560679 FAM237BA0A1B0GVD1 139 aa9.31□□□□□ -0.92
TPM1-225ENST00000560679 PGRMC1O00264 195 aaKnown RBP9.31□□□□□ -0.92
TPM1-225ENST00000560679 TFECO14948 347 aaPredicted RBP9.31□□□□□ -0.92
TPM1-225ENST00000560679 PHF2O75151 1096 aa9.31□□□□□ -0.92
TPM1-225ENST00000560679 SUN1O94901 812 aa9.31□□□□□ -0.92
TPM1-225ENST00000560679 METTL18O95568 372 aa9.31□□□□□ -0.92
TPM1-225ENST00000560679 GOT2P00505 430 aaKnown RBP9.31□□□□□ -0.92
TPM1-225ENST00000560679 STATHP02808 62 aa9.31□□□□□ -0.92
TPM1-225ENST00000560679 APOA4P06727 396 aa9.31□□□□□ -0.92
TPM1-225ENST00000560679 CYC1P08574 325 aa9.31□□□□□ -0.92
TPM1-225ENST00000560679 RBP3P10745 1247 aa9.31□□□□□ -0.92
TPM1-225ENST00000560679 TFEBP19484 476 aa9.31□□□□□ -0.92
TPM1-225ENST00000560679 TPP2P29144 1249 aaPredicted RBP9.31□□□□□ -0.92
TPM1-225ENST00000560679 CMPK1P30085 196 aa9.31□□□□□ -0.92
TPM1-225ENST00000560679 NUP107P57740 925 aa9.31□□□□□ -0.92
TPM1-225ENST00000560679 EIF3EP60228 445 aaKnown RBP9.31□□□□□ -0.92
TPM1-225ENST00000560679 GABPB1Q06547 395 aaPredicted RBP9.31□□□□□ -0.92
TPM1-225ENST00000560679 FAM53BQ14153 422 aa9.31□□□□□ -0.92
TPM1-225ENST00000560679 EXT1Q16394 746 aa9.31□□□□□ -0.92
TPM1-225ENST00000560679 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.31□□□□□ -0.92
TPM1-225ENST00000560679 MFSD4BQ5TF39 518 aa9.31□□□□□ -0.92
TPM1-225ENST00000560679 C8orf74Q6P047 294 aa9.31□□□□□ -0.92
TPM1-225ENST00000560679 PAPD4Q6PIY7 484 aaKnown RBP9.31□□□□□ -0.92
TPM1-225ENST00000560679 AFTPHQ6ULP2 937 aa9.31□□□□□ -0.92
TPM1-225ENST00000560679 LDB1Q86U70 411 aaPredicted RBP9.31□□□□□ -0.92
TPM1-225ENST00000560679 BIVMQ86UB2 503 aa9.31□□□□□ -0.92
TPM1-225ENST00000560679 KIF2BQ8N4N8 673 aa9.31□□□□□ -0.92
TPM1-225ENST00000560679 SLC5A8Q8N695 610 aa9.31□□□□□ -0.92
TPM1-225ENST00000560679 WFDC11Q8NEX6 87 aa9.31□□□□□ -0.92
TPM1-225ENST00000560679 ACTRT1Q8TDG2 376 aa9.31□□□□□ -0.92
TPM1-225ENST00000560679 RND1Q92730 232 aa9.31□□□□□ -0.92
TPM1-225ENST00000560679 RAD51AP1Q96B01 352 aa9.31□□□□□ -0.92
TPM1-225ENST00000560679 ARSGQ96EG1 525 aa9.31□□□□□ -0.92
TPM1-225ENST00000560679 HES6Q96HZ4 224 aa9.31□□□□□ -0.92
TPM1-225ENST00000560679 MS4A14Q96JA4 679 aa9.31□□□□□ -0.92
TPM1-225ENST00000560679 ACBD3Q9H3P7 528 aa9.31□□□□□ -0.92
TPM1-225ENST00000560679 TRIM45Q9H8W5 580 aaPredicted RBP9.31□□□□□ -0.92
TPM1-225ENST00000560679 LRRC40Q9H9A6 602 aa9.31□□□□□ -0.92
TPM1-225ENST00000560679 PLSCR2Q9NRY7 297 aa9.31□□□□□ -0.92
TPM1-225ENST00000560679 SPATA7Q9P0W8 599 aa9.31□□□□□ -0.92
TPM1-225ENST00000560679 HCN3Q9P1Z3 774 aa9.31□□□□□ -0.92
TPM1-225ENST00000560679 C19orf25Q9UFG5 118 aaPredicted RBP9.31□□□□□ -0.92
TPM1-225ENST00000560679 TTC7AQ9ULT0 858 aaPredicted RBP9.31□□□□□ -0.92
TPM1-225ENST00000560679 ALG6Q9Y672 507 aa9.31□□□□□ -0.92
TPM1-225ENST00000560679 DNAJC13O75165 2243 aa9.31□□□□□ -0.92
TPM1-225ENST00000560679 ZANQ9Y493 2812 aa9.3□□□□□ -0.92
TPM1-225ENST00000560679 ZNF407Q9C0G0 2248 aa9.3□□□□□ -0.92
TPM1-225ENST00000560679 ARHGEF33A8MVX0 844 aa9.3□□□□□ -0.92
TPM1-225ENST00000560679 H0YIG0 161 aa9.3□□□□□ -0.92
TPM1-225ENST00000560679 HAT1O14929 419 aa9.3□□□□□ -0.92
TPM1-225ENST00000560679 HS6ST1O60243 411 aa9.3□□□□□ -0.92
TPM1-225ENST00000560679 CEP104O60308 925 aa9.3□□□□□ -0.92
TPM1-225ENST00000560679 CDC40O60508 579 aaKnown RBP eCLIP9.3□□□□□ -0.92
TPM1-225ENST00000560679 EZRP15311 586 aaKnown RBP9.3□□□□□ -0.92
TPM1-225ENST00000560679 XCR1P46094 333 aa9.3□□□□□ -0.92
TPM1-225ENST00000560679 MEOX1P50221 254 aa9.3□□□□□ -0.92
TPM1-225ENST00000560679 SLC26A5P58743 744 aa9.3□□□□□ -0.92
TPM1-225ENST00000560679 RHAGQ02094 409 aa9.3□□□□□ -0.92
TPM1-225ENST00000560679 ACVR1Q04771 509 aa9.3□□□□□ -0.92
TPM1-225ENST00000560679 PMPCAQ10713 525 aa9.3□□□□□ -0.92
TPM1-225ENST00000560679 USP10Q14694 798 aaKnown RBP9.3□□□□□ -0.92
TPM1-225ENST00000560679 NAA25Q14CX7 972 aa9.3□□□□□ -0.92
TPM1-225ENST00000560679 TMED2Q15363 201 aa9.3□□□□□ -0.92
TPM1-225ENST00000560679 GLIPR1L2Q4G1C9 344 aa9.3□□□□□ -0.92
TPM1-225ENST00000560679 SFT2D3Q587I9 215 aa9.3□□□□□ -0.92
TPM1-225ENST00000560679 TMEM198Q66K66 360 aa9.3□□□□□ -0.92
TPM1-225ENST00000560679 TMEM211Q6ICI0 200 aa9.3□□□□□ -0.92
TPM1-225ENST00000560679 SUSD1Q6UWL2 747 aa9.3□□□□□ -0.92
TPM1-225ENST00000560679 TAOK1Q7L7X3 1001 aa9.3□□□□□ -0.92
TPM1-225ENST00000560679 KRTAP1-3Q8IUG1 177 aa9.3□□□□□ -0.92
TPM1-225ENST00000560679 PLD3Q8IV08 490 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 149.2 ms