RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 OR4D2P58180 307 aa9.88□□□□□ -0.83
CDC42BPB-207ENST00000560492 PTK6Q13882 451 aa9.88□□□□□ -0.83
CDC42BPB-207ENST00000560492 ARHGAP19Q14CB8 494 aa9.88□□□□□ -0.83
CDC42BPB-207ENST00000560492 ABRAXAS2Q15018 415 aa9.88□□□□□ -0.83
CDC42BPB-207ENST00000560492 NSDHLQ15738 373 aa9.88□□□□□ -0.83
CDC42BPB-207ENST00000560492 ACSBG2Q5FVE4 666 aa9.88□□□□□ -0.83
CDC42BPB-207ENST00000560492 CTSL3PQ5NE16 218 aa9.88□□□□□ -0.83
CDC42BPB-207ENST00000560492 SEL1L2Q5TEA6 688 aa9.88□□□□□ -0.83
CDC42BPB-207ENST00000560492 ZNF425Q6IV72 752 aa9.88□□□□□ -0.83
CDC42BPB-207ENST00000560492 PRUNE1Q86TP1 453 aa9.88□□□□□ -0.83
CDC42BPB-207ENST00000560492 MPP5Q8N3R9 675 aa9.88□□□□□ -0.83
CDC42BPB-207ENST00000560492 CPSF7Q8N684 471 aaKnown RBP9.88□□□□□ -0.83
CDC42BPB-207ENST00000560492 TC2NQ8N9U0 490 aa9.88□□□□□ -0.83
CDC42BPB-207ENST00000560492 SLC35B2Q8TB61 432 aa9.88□□□□□ -0.83
CDC42BPB-207ENST00000560492 M1APQ8TC57 530 aa9.88□□□□□ -0.83
CDC42BPB-207ENST00000560492 PHF10Q8WUB8 498 aaKnown RBP9.88□□□□□ -0.83
CDC42BPB-207ENST00000560492 PEX13Q92968 403 aa9.88□□□□□ -0.83
CDC42BPB-207ENST00000560492 ALKBH8Q96BT7 664 aaKnown RBP9.88□□□□□ -0.83
CDC42BPB-207ENST00000560492 SCMH1Q96GD3 660 aa9.88□□□□□ -0.83
CDC42BPB-207ENST00000560492 POM121Q96HA1 1249 aa9.88□□□□□ -0.83
CDC42BPB-207ENST00000560492 PEX11GQ96HA9 241 aa9.88□□□□□ -0.83
CDC42BPB-207ENST00000560492 PRAP1Q96NZ9 151 aa9.88□□□□□ -0.83
CDC42BPB-207ENST00000560492 MACROD1Q9BQ69 325 aa9.88□□□□□ -0.83
CDC42BPB-207ENST00000560492 ENKD1Q9H0I2 346 aa9.88□□□□□ -0.83
CDC42BPB-207ENST00000560492 NF1P21359 2839 aa9.88□□□□□ -0.83
CDC42BPB-207ENST00000560492 ASPDHA6ND91 283 aa9.87□□□□□ -0.83
CDC42BPB-207ENST00000560492 ZNF860A6NHJ4 632 aa9.87□□□□□ -0.83
CDC42BPB-207ENST00000560492 MIF4GDA9UHW6 222 aaKnown RBP9.87□□□□□ -0.83
CDC42BPB-207ENST00000560492 MYO1CO00159 1063 aa9.87□□□□□ -0.83
CDC42BPB-207ENST00000560492 PRMT3O60678 531 aa9.87□□□□□ -0.83
CDC42BPB-207ENST00000560492 ZWINTO95229 277 aa9.87□□□□□ -0.83
CDC42BPB-207ENST00000560492 VAPBO95292 243 aa9.87□□□□□ -0.83
CDC42BPB-207ENST00000560492 MATN4O95460 622 aa9.87□□□□□ -0.83
CDC42BPB-207ENST00000560492 NSA2O95478 260 aaKnown RBP9.87□□□□□ -0.83
CDC42BPB-207ENST00000560492 ERGP11308 486 aa9.87□□□□□ -0.83
CDC42BPB-207ENST00000560492 CD99P14209 185 aa9.87□□□□□ -0.83
CDC42BPB-207ENST00000560492 NMBRP28336 390 aa9.87□□□□□ -0.83
CDC42BPB-207ENST00000560492 ATP5DP30049 168 aa9.87□□□□□ -0.83
CDC42BPB-207ENST00000560492 STIP1P31948 543 aaKnown RBP9.87□□□□□ -0.83
CDC42BPB-207ENST00000560492 PTGER1P34995 402 aa9.87□□□□□ -0.83
CDC42BPB-207ENST00000560492 PTGS2P35354 604 aa9.87□□□□□ -0.83
CDC42BPB-207ENST00000560492 RFC3P40938 356 aa9.87□□□□□ -0.83
CDC42BPB-207ENST00000560492 TERF1P54274 439 aa9.87□□□□□ -0.83
CDC42BPB-207ENST00000560492 RPS15AP62244 130 aaKnown RBP9.87□□□□□ -0.83
CDC42BPB-207ENST00000560492 ABATP80404 500 aa9.87□□□□□ -0.83
CDC42BPB-207ENST00000560492 BASP1P80723 227 aaKnown RBP9.87□□□□□ -0.83
CDC42BPB-207ENST00000560492 TBX2Q13207 712 aaPredicted RBP9.87□□□□□ -0.83
CDC42BPB-207ENST00000560492 KRTAP21-3Q3LHN1 58 aa9.87□□□□□ -0.83
CDC42BPB-207ENST00000560492 TTLL9Q3SXZ7 439 aa9.87□□□□□ -0.83
CDC42BPB-207ENST00000560492 RNF187Q5TA31 235 aaPredicted RBP9.87□□□□□ -0.83
CDC42BPB-207ENST00000560492 H3F3CQ6NXT2 135 aa9.87□□□□□ -0.83
CDC42BPB-207ENST00000560492 CES3Q6UWW8 571 aa9.87□□□□□ -0.83
CDC42BPB-207ENST00000560492 SYCE1Q8N0S2 351 aa9.87□□□□□ -0.83
CDC42BPB-207ENST00000560492 ASB5Q8WWX0 329 aa9.87□□□□□ -0.83
CDC42BPB-207ENST00000560492 TRIM51Q9BSJ1 452 aa9.87□□□□□ -0.83
CDC42BPB-207ENST00000560492 TRIM5Q9C035 493 aa9.87□□□□□ -0.83
CDC42BPB-207ENST00000560492 CCDC68Q9H2F9 335 aa9.87□□□□□ -0.83
CDC42BPB-207ENST00000560492 MMP25Q9NPA2 562 aa9.87□□□□□ -0.83
CDC42BPB-207ENST00000560492 BFARQ9NZS9 450 aa9.87□□□□□ -0.83
CDC42BPB-207ENST00000560492 EPN1Q9Y6I3 576 aaPredicted RBP9.87□□□□□ -0.83
CDC42BPB-207ENST00000560492 ZFHX3Q15911 3703 aa9.86□□□□□ -0.83
CDC42BPB-207ENST00000560492 A0A1B0GTH9 108 aa9.86□□□□□ -0.83
CDC42BPB-207ENST00000560492 LIASO43766 372 aa9.86□□□□□ -0.83
CDC42BPB-207ENST00000560492 NME2P1O60361 137 aa9.86□□□□□ -0.83
CDC42BPB-207ENST00000560492 PSIP1O75475 530 aaKnown RBP9.86□□□□□ -0.83
CDC42BPB-207ENST00000560492 ESR1P03372 595 aa9.86□□□□□ -0.83
CDC42BPB-207ENST00000560492 SERPIND1P05546 499 aa9.86□□□□□ -0.83
CDC42BPB-207ENST00000560492 CYC1P08574 325 aa9.86□□□□□ -0.83
CDC42BPB-207ENST00000560492 NME2P22392 152 aa9.86□□□□□ -0.83
CDC42BPB-207ENST00000560492 BCL6P41182 706 aa9.86□□□□□ -0.83
CDC42BPB-207ENST00000560492 CYB561P49447 251 aa9.86□□□□□ -0.83
CDC42BPB-207ENST00000560492 MEOX1P50221 254 aa9.86□□□□□ -0.83
CDC42BPB-207ENST00000560492 ITGA8P53708 1063 aa9.86□□□□□ -0.83
CDC42BPB-207ENST00000560492 SLC26A5P58743 744 aa9.86□□□□□ -0.83
CDC42BPB-207ENST00000560492 PPP2R2AP63151 447 aa9.86□□□□□ -0.83
CDC42BPB-207ENST00000560492 KLF1Q13351 362 aaPredicted RBP9.86□□□□□ -0.83
CDC42BPB-207ENST00000560492 CUL1Q13616 776 aa9.86□□□□□ -0.83
CDC42BPB-207ENST00000560492 KCNJ11Q14654 390 aa9.86□□□□□ -0.83
CDC42BPB-207ENST00000560492 USP10Q14694 798 aaKnown RBP9.86□□□□□ -0.83
CDC42BPB-207ENST00000560492 CES4AQ5XG92 561 aa9.86□□□□□ -0.83
CDC42BPB-207ENST00000560492 TMEM211Q6ICI0 200 aa9.86□□□□□ -0.83
CDC42BPB-207ENST00000560492 RPS19BP1Q86WX3 136 aaKnown RBP9.86□□□□□ -0.83
CDC42BPB-207ENST00000560492 SIAH3Q8IW03 269 aa9.86□□□□□ -0.83
CDC42BPB-207ENST00000560492 REXO1L1PQ8IX06 675 aa9.86□□□□□ -0.83
CDC42BPB-207ENST00000560492 SHISA5Q8N114 240 aa9.86□□□□□ -0.83
CDC42BPB-207ENST00000560492 KIF2BQ8N4N8 673 aa9.86□□□□□ -0.83
CDC42BPB-207ENST00000560492 CAMKVQ8NCB2 501 aa9.86□□□□□ -0.83
CDC42BPB-207ENST00000560492 ACRBPQ8NEB7 543 aa9.86□□□□□ -0.83
CDC42BPB-207ENST00000560492 ZNF480Q8WV37 535 aa9.86□□□□□ -0.83
CDC42BPB-207ENST00000560492 C1orf54Q8WWF1 131 aa9.86□□□□□ -0.83
CDC42BPB-207ENST00000560492 RND1Q92730 232 aa9.86□□□□□ -0.83
CDC42BPB-207ENST00000560492 TSLPQ969D9 159 aa9.86□□□□□ -0.83
CDC42BPB-207ENST00000560492 PANX2Q96RD6 677 aa9.86□□□□□ -0.83
CDC42BPB-207ENST00000560492 DMRTA2Q96SC8 542 aa9.86□□□□□ -0.83
CDC42BPB-207ENST00000560492 NPAS2Q99743 824 aa9.86□□□□□ -0.83
CDC42BPB-207ENST00000560492 UCK2Q9BZX2 261 aa9.86□□□□□ -0.83
CDC42BPB-207ENST00000560492 IL22Q9GZX6 179 aa9.86□□□□□ -0.83
CDC42BPB-207ENST00000560492 KCNJ16Q9NPI9 418 aa9.86□□□□□ -0.83
CDC42BPB-207ENST00000560492 CCDC177Q9NQR7 707 aaPredicted RBP9.86□□□□□ -0.83
CDC42BPB-207ENST00000560492 PAK5Q9P286 719 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms