RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 SYTL1Q8IYJ3 562 aa9.35□□□□□ -0.91
RTF1-206ENST00000560447 CFAP206Q8IYR0 622 aa9.35□□□□□ -0.91
RTF1-206ENST00000560447 METTL4Q8N3J2 472 aa9.35□□□□□ -0.91
RTF1-206ENST00000560447 SYNPOQ8N3V7 929 aa9.35□□□□□ -0.91
RTF1-206ENST00000560447 C1orf52Q8N6N3 182 aaKnown RBP9.35□□□□□ -0.91
RTF1-206ENST00000560447 HUS1BQ8NHY5 278 aa9.35□□□□□ -0.91
RTF1-206ENST00000560447 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.35□□□□□ -0.91
RTF1-206ENST00000560447 NETO1Q8TDF5 533 aa9.35□□□□□ -0.91
RTF1-206ENST00000560447 ZNF566Q969W8 418 aa9.35□□□□□ -0.91
RTF1-206ENST00000560447 NXPE3Q969Y0 559 aa9.35□□□□□ -0.91
RTF1-206ENST00000560447 RSPRY1Q96DX4 576 aa9.35□□□□□ -0.91
RTF1-206ENST00000560447 MED8Q96G25 268 aa9.35□□□□□ -0.91
RTF1-206ENST00000560447 DOK1Q99704 481 aa9.35□□□□□ -0.91
RTF1-206ENST00000560447 INPP5KQ9BT40 448 aa9.35□□□□□ -0.91
RTF1-206ENST00000560447 TBCDQ9BTW9 1192 aa9.35□□□□□ -0.91
RTF1-206ENST00000560447 WRAP53Q9BUR4 548 aaKnown RBP9.35□□□□□ -0.91
RTF1-206ENST00000560447 OR2AG1Q9H205 316 aa9.35□□□□□ -0.91
RTF1-206ENST00000560447 REEP4Q9H6H4 257 aa9.35□□□□□ -0.91
RTF1-206ENST00000560447 TPT1P8Q9HAU6 139 aa9.35□□□□□ -0.91
RTF1-206ENST00000560447 GULP1Q9UBP9 304 aa9.35□□□□□ -0.91
RTF1-206ENST00000560447 BAG5Q9UL15 447 aa9.35□□□□□ -0.91
RTF1-206ENST00000560447 C1orf226A1L170 272 aa9.34□□□□□ -0.91
RTF1-206ENST00000560447 PIPSLA2A3N6 862 aa9.34□□□□□ -0.91
RTF1-206ENST00000560447 CCDC160A6NGH7 325 aa9.34□□□□□ -0.91
RTF1-206ENST00000560447 A8MVJ9 347 aa9.34□□□□□ -0.91
RTF1-206ENST00000560447 HEPACAM2A8MVW5 462 aa9.34□□□□□ -0.91
RTF1-206ENST00000560447 NOBOXO60393 691 aa9.34□□□□□ -0.91
RTF1-206ENST00000560447 E2F6O75461 281 aa9.34□□□□□ -0.91
RTF1-206ENST00000560447 TRMUO75648 421 aaKnown RBP9.34□□□□□ -0.91
RTF1-206ENST00000560447 POP7O75817 140 aaKnown RBP9.34□□□□□ -0.91
RTF1-206ENST00000560447 FABP3P05413 133 aa9.34□□□□□ -0.91
RTF1-206ENST00000560447 GNAO1P09471 354 aa9.34□□□□□ -0.91
RTF1-206ENST00000560447 CCDC159P0C7I6 412 aa9.34□□□□□ -0.91
RTF1-206ENST00000560447 FPR1P21462 350 aa9.34□□□□□ -0.91
RTF1-206ENST00000560447 DNAJA1P31689 397 aaKnown RBP9.34□□□□□ -0.91
RTF1-206ENST00000560447 CDKN2CP42773 168 aa9.34□□□□□ -0.91
RTF1-206ENST00000560447 MMP16P51512 607 aa9.34□□□□□ -0.91
RTF1-206ENST00000560447 ITGA1P56199 1179 aa9.34□□□□□ -0.91
RTF1-206ENST00000560447 CXCR4P61073 352 aa9.34□□□□□ -0.91
RTF1-206ENST00000560447 PLIN5Q00G26 463 aa9.34□□□□□ -0.91
RTF1-206ENST00000560447 TAP2Q03519 686 aa9.34□□□□□ -0.91
RTF1-206ENST00000560447 VAC14Q08AM6 782 aa9.34□□□□□ -0.91
RTF1-206ENST00000560447 DMPKQ09013 629 aa9.34□□□□□ -0.91
RTF1-206ENST00000560447 FCHO2Q0JRZ9 810 aa9.34□□□□□ -0.91
RTF1-206ENST00000560447 KEAP1Q14145 624 aa9.34□□□□□ -0.91
RTF1-206ENST00000560447 SKIV2LQ15477 1246 aaKnown RBP9.34□□□□□ -0.91
RTF1-206ENST00000560447 NKG7Q16617 165 aa9.34□□□□□ -0.91
RTF1-206ENST00000560447 CYP2A13Q16696 494 aa9.34□□□□□ -0.91
RTF1-206ENST00000560447 OTUD3Q5T2D3 398 aaPredicted RBP9.34□□□□□ -0.91
RTF1-206ENST00000560447 BROXQ5VW32 411 aa9.34□□□□□ -0.91
RTF1-206ENST00000560447 OR2T5Q6IEZ7 315 aa9.34□□□□□ -0.91
RTF1-206ENST00000560447 CES5AQ6NT32 575 aa9.34□□□□□ -0.91
RTF1-206ENST00000560447 TBPL2Q6SJ96 375 aa9.34□□□□□ -0.91
RTF1-206ENST00000560447 DNAJC14Q6Y2X3 702 aaPredicted RBP9.34□□□□□ -0.91
RTF1-206ENST00000560447 TMEM26Q6ZUK4 368 aa9.34□□□□□ -0.91
RTF1-206ENST00000560447 TMPRSS11BQ86T26 416 aa9.34□□□□□ -0.91
RTF1-206ENST00000560447 LRRTM4Q86VH4 590 aa9.34□□□□□ -0.91
RTF1-206ENST00000560447 PTOV1Q86YD1 416 aa9.34□□□□□ -0.91
RTF1-206ENST00000560447 PHACTR4Q8IZ21 702 aa9.34□□□□□ -0.91
RTF1-206ENST00000560447 RAB42Q8N4Z0 105 aa9.34□□□□□ -0.91
RTF1-206ENST00000560447 ARL10Q8N8L6 244 aa9.34□□□□□ -0.91
RTF1-206ENST00000560447 OR7A2PQ8NGA2 310 aa9.34□□□□□ -0.91
RTF1-206ENST00000560447 OR2T29Q8NH02 315 aa9.34□□□□□ -0.91
RTF1-206ENST00000560447 ZFP90Q8TF47 636 aa9.34□□□□□ -0.91
RTF1-206ENST00000560447 FBLIM1Q8WUP2 373 aa9.34□□□□□ -0.91
RTF1-206ENST00000560447 SNX19Q92543 992 aa9.34□□□□□ -0.91
RTF1-206ENST00000560447 NEIL2Q969S2 332 aa9.34□□□□□ -0.91
RTF1-206ENST00000560447 FBXL20Q96IG2 436 aa9.34□□□□□ -0.91
RTF1-206ENST00000560447 EGLN2Q96KS0 407 aa9.34□□□□□ -0.91
RTF1-206ENST00000560447 QRFPRQ96P65 431 aa9.34□□□□□ -0.91
RTF1-206ENST00000560447 MTERF1Q99551 399 aaKnown RBP9.34□□□□□ -0.91
RTF1-206ENST00000560447 BCL7BQ9BQE9 202 aa9.34□□□□□ -0.91
RTF1-206ENST00000560447 NPLQ9BXD5 320 aaPredicted RBP9.34□□□□□ -0.91
RTF1-206ENST00000560447 ZDHHC5Q9C0B5 715 aa9.34□□□□□ -0.91
RTF1-206ENST00000560447 ING2Q9H160 280 aa9.34□□□□□ -0.91
RTF1-206ENST00000560447 CHST8Q9H2A9 424 aa9.34□□□□□ -0.91
RTF1-206ENST00000560447 OR52A5Q9H2C5 316 aa9.34□□□□□ -0.91
RTF1-206ENST00000560447 RHBGQ9H310 441 aa9.34□□□□□ -0.91
RTF1-206ENST00000560447 RMI1Q9H9A7 625 aa9.34□□□□□ -0.91
RTF1-206ENST00000560447 CARS2Q9HA77 564 aaKnown RBP9.34□□□□□ -0.91
RTF1-206ENST00000560447 FBRSQ9HAH7 460 aa9.34□□□□□ -0.91
RTF1-206ENST00000560447 SLC24A3Q9HC58 644 aa9.34□□□□□ -0.91
RTF1-206ENST00000560447 DMRT3Q9NQL9 472 aa9.34□□□□□ -0.91
RTF1-206ENST00000560447 SLC6A13Q9NSD5 602 aa9.34□□□□□ -0.91
RTF1-206ENST00000560447 FAM118AQ9NWS6 357 aa9.34□□□□□ -0.91
RTF1-206ENST00000560447 ADPRHL2Q9NX46 363 aa9.34□□□□□ -0.91
RTF1-206ENST00000560447 ATXN10Q9UBB4 475 aa9.34□□□□□ -0.91
RTF1-206ENST00000560447 CDH7Q9ULB5 785 aa9.34□□□□□ -0.91
RTF1-206ENST00000560447 ACSL5Q9ULC5 683 aa9.34□□□□□ -0.91
RTF1-206ENST00000560447 ICKQ9UPZ9 632 aa9.34□□□□□ -0.91
RTF1-206ENST00000560447 TRIM64BA6NI03 449 aa9.33□□□□□ -0.92
RTF1-206ENST00000560447 GABRR3A8MPY1 467 aa9.33□□□□□ -0.92
RTF1-206ENST00000560447 KMOO15229 486 aa9.33□□□□□ -0.92
RTF1-206ENST00000560447 MMP20O60882 483 aa9.33□□□□□ -0.92
RTF1-206ENST00000560447 GPR37L1O60883 481 aa9.33□□□□□ -0.92
RTF1-206ENST00000560447 LRATO95237 230 aa9.33□□□□□ -0.92
RTF1-206ENST00000560447 KRT75O95678 551 aa9.33□□□□□ -0.92
RTF1-206ENST00000560447 LAMP1P11279 417 aa9.33□□□□□ -0.92
RTF1-206ENST00000560447 PCNAP12004 261 aa9.33□□□□□ -0.92
RTF1-206ENST00000560447 DCKP27707 260 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms