RNA–Protein interactions for RNA: ENST00000559898.5

HDDC3-205, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,024 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-205ENST00000559898 MOCS1Q9NZB8 636 aa16.77■□□□□ 0.28
HDDC3-205ENST00000559898 CROCCQ5TZA2 2017 aa16.77■□□□□ 0.27
HDDC3-205ENST00000559898 RP1L1Q8IWN7 2480 aaPredicted RBP16.76■□□□□ 0.27
HDDC3-205ENST00000559898 FAM95CA0A1B0GW59 222 aa16.76■□□□□ 0.27
HDDC3-205ENST00000559898 A0A1W2PQ72 361 aa16.76■□□□□ 0.27
HDDC3-205ENST00000559898 C4orf51C9J302 202 aa16.76■□□□□ 0.27
HDDC3-205ENST00000559898 WISP2O76076 250 aa16.76■□□□□ 0.27
HDDC3-205ENST00000559898 SEC24DO94855 1032 aaPredicted RBP16.76■□□□□ 0.27
HDDC3-205ENST00000559898 NSA2O95478 260 aaKnown RBP16.76■□□□□ 0.27
HDDC3-205ENST00000559898 XCR1P46094 333 aa16.76■□□□□ 0.27
HDDC3-205ENST00000559898 C2orf54Q08AI8 447 aa16.76■□□□□ 0.27
HDDC3-205ENST00000559898 ZNF169Q14929 603 aaPredicted RBP16.76■□□□□ 0.27
HDDC3-205ENST00000559898 DUPD1Q68J44 220 aa16.76■□□□□ 0.27
HDDC3-205ENST00000559898 CAPN13Q6MZZ7 669 aaPredicted RBP16.76■□□□□ 0.27
HDDC3-205ENST00000559898 LRRC8EQ6NSJ5 796 aa16.76■□□□□ 0.27
HDDC3-205ENST00000559898 ISLR2Q6UXK2 745 aa16.76■□□□□ 0.27
HDDC3-205ENST00000559898 ASPGQ86U10 573 aa16.76■□□□□ 0.27
HDDC3-205ENST00000559898 PALM2Q8IXS6 379 aa16.76■□□□□ 0.27
HDDC3-205ENST00000559898 KBTBD2Q8IY47 623 aa16.76■□□□□ 0.27
HDDC3-205ENST00000559898 SPATA6LQ8N4H0 392 aa16.76■□□□□ 0.27
HDDC3-205ENST00000559898 OR4K1Q8NGD4 311 aa16.76■□□□□ 0.27
HDDC3-205ENST00000559898 GRHL3Q8TE85 626 aa16.76■□□□□ 0.27
HDDC3-205ENST00000559898 SLC13A3Q8WWT9 602 aa16.76■□□□□ 0.27
HDDC3-205ENST00000559898 TM9SF4Q92544 642 aa16.76■□□□□ 0.27
HDDC3-205ENST00000559898 NEIL2Q969S2 332 aa16.76■□□□□ 0.27
HDDC3-205ENST00000559898 FBXL8Q96CD0 374 aa16.76■□□□□ 0.27
HDDC3-205ENST00000559898 IMMP1LQ96LU5 166 aa16.76■□□□□ 0.27
HDDC3-205ENST00000559898 ZNF700Q9H0M5 742 aa16.76■□□□□ 0.27
HDDC3-205ENST00000559898 CAB39LQ9H9S4 337 aa16.76■□□□□ 0.27
HDDC3-205ENST00000559898 LRRC4CQ9HCJ2 640 aa16.76■□□□□ 0.27
HDDC3-205ENST00000559898 NAALAD2Q9Y3Q0 740 aa16.76■□□□□ 0.27
HDDC3-205ENST00000559898 MAST4O15021 2626 aa16.76■□□□□ 0.27
HDDC3-205ENST00000559898 CCDC188H7C350 402 aa16.75■□□□□ 0.27
HDDC3-205ENST00000559898 RAD51CO43502 376 aa16.75■□□□□ 0.27
HDDC3-205ENST00000559898 OR1F1O43749 312 aa16.75■□□□□ 0.27
HDDC3-205ENST00000559898 MAN1A2O60476 641 aa16.75■□□□□ 0.27
HDDC3-205ENST00000559898 CDC123O75794 336 aaPredicted RBP16.75■□□□□ 0.27
HDDC3-205ENST00000559898 ZNF37AP17032 561 aaPredicted RBP16.75■□□□□ 0.27
HDDC3-205ENST00000559898 COL8A1P27658 744 aa16.75■□□□□ 0.27
HDDC3-205ENST00000559898 SSTR1P30872 391 aa16.75■□□□□ 0.27
HDDC3-205ENST00000559898 AVPR1BP47901 424 aa16.75■□□□□ 0.27
HDDC3-205ENST00000559898 MGAT5Q09328 741 aa16.75■□□□□ 0.27
HDDC3-205ENST00000559898 CDC16Q13042 620 aa16.75■□□□□ 0.27
HDDC3-205ENST00000559898 NDUFA9Q16795 377 aa16.75■□□□□ 0.27
HDDC3-205ENST00000559898 MINDY4Q4G0A6 757 aa16.75■□□□□ 0.27
HDDC3-205ENST00000559898 FBXO48Q5FWF7 155 aa16.75■□□□□ 0.27
HDDC3-205ENST00000559898 MFSD4BQ5TF39 518 aa16.75■□□□□ 0.27
HDDC3-205ENST00000559898 FCRLBQ6BAA4 426 aa16.75■□□□□ 0.27
HDDC3-205ENST00000559898 ZBED8Q8IZ13 594 aa16.75■□□□□ 0.27
HDDC3-205ENST00000559898 ANKRD53Q8N9V6 530 aa16.75■□□□□ 0.27
HDDC3-205ENST00000559898 ABHD11Q8NFV4 315 aa16.75■□□□□ 0.27
HDDC3-205ENST00000559898 SSC4DQ8WTU2 575 aa16.75■□□□□ 0.27
HDDC3-205ENST00000559898 TSLPQ969D9 159 aa16.75■□□□□ 0.27
HDDC3-205ENST00000559898 PEX11GQ96HA9 241 aa16.75■□□□□ 0.27
HDDC3-205ENST00000559898 CYTH2Q99418 400 aa16.75■□□□□ 0.27
HDDC3-205ENST00000559898 GRHL1Q9NZI5 618 aa16.75■□□□□ 0.27
HDDC3-205ENST00000559898 MTO1Q9Y2Z2 717 aaKnown RBP16.75■□□□□ 0.27
HDDC3-205ENST00000559898 SPTAN1Q13813 2472 aaKnown RBP16.74■□□□□ 0.27
HDDC3-205ENST00000559898 ANKUB1A6NFN9 424 aa16.74■□□□□ 0.27
HDDC3-205ENST00000559898 H0YIG0 161 aa16.74■□□□□ 0.27
HDDC3-205ENST00000559898 TXNDC9O14530 226 aa16.74■□□□□ 0.27
HDDC3-205ENST00000559898 PRPF4O43172 522 aaKnown RBP eCLIP16.74■□□□□ 0.27
HDDC3-205ENST00000559898 WISP3O95389 354 aaPredicted RBP16.74■□□□□ 0.27
HDDC3-205ENST00000559898 C1QAP02745 245 aa16.74■□□□□ 0.27
HDDC3-205ENST00000559898 SERPINA7P05543 415 aa16.74■□□□□ 0.27
HDDC3-205ENST00000559898 HIST1H2AGP0C0S8 130 aaPredicted RBP16.74■□□□□ 0.27
HDDC3-205ENST00000559898 C8orf89P0DMQ9 161 aa16.74■□□□□ 0.27
HDDC3-205ENST00000559898 HIST1H2ADP20671 130 aa16.74■□□□□ 0.27
HDDC3-205ENST00000559898 HRH2P25021 359 aa16.74■□□□□ 0.27
HDDC3-205ENST00000559898 CXCR2P25025 360 aa16.74■□□□□ 0.27
HDDC3-205ENST00000559898 VARSP26640 1264 aaKnown RBP16.74■□□□□ 0.27
HDDC3-205ENST00000559898 GDF5P43026 501 aa16.74■□□□□ 0.27
HDDC3-205ENST00000559898 TSFMP43897 325 aaKnown RBP16.74■□□□□ 0.27
HDDC3-205ENST00000559898 HYAL2Q12891 473 aa16.74■□□□□ 0.27
HDDC3-205ENST00000559898 FRG1Q14331 258 aaKnown RBP16.74■□□□□ 0.27
HDDC3-205ENST00000559898 IRAK1BP1Q5VVH5 260 aa16.74■□□□□ 0.27
HDDC3-205ENST00000559898 ANKRD37Q7Z713 158 aa16.74■□□□□ 0.27
HDDC3-205ENST00000559898 ZGRF1Q86YA3 2104 aa16.74■□□□□ 0.27
HDDC3-205ENST00000559898 OR1N1Q8NGS0 311 aa16.74■□□□□ 0.27
HDDC3-205ENST00000559898 LRRC39Q96DD0 335 aa16.74■□□□□ 0.27
HDDC3-205ENST00000559898 HIST1H2AHQ96KK5 128 aa16.74■□□□□ 0.27
HDDC3-205ENST00000559898 TAAR6Q96RI8 345 aa16.74■□□□□ 0.27
HDDC3-205ENST00000559898 NPAS2Q99743 824 aa16.74■□□□□ 0.27
HDDC3-205ENST00000559898 HIST1H2AJQ99878 128 aa16.74■□□□□ 0.27
HDDC3-205ENST00000559898 H2AFJQ9BTM1 129 aa16.74■□□□□ 0.27
HDDC3-205ENST00000559898 SLC29A3Q9BZD2 475 aa16.74■□□□□ 0.27
HDDC3-205ENST00000559898 PCBD2Q9H0N5 130 aa16.74■□□□□ 0.27
HDDC3-205ENST00000559898 KLHL31Q9H511 634 aa16.74■□□□□ 0.27
HDDC3-205ENST00000559898 EPS8L2Q9H6S3 715 aa16.74■□□□□ 0.27
HDDC3-205ENST00000559898 LANCL2Q9NS86 450 aa16.74■□□□□ 0.27
HDDC3-205ENST00000559898 ZFATQ9P243 1243 aa16.74■□□□□ 0.27
HDDC3-205ENST00000559898 PLEKHB1Q9UF11 243 aaPredicted RBP16.74■□□□□ 0.27
HDDC3-205ENST00000559898 NAV2Q8IVL1 2488 aa16.73■□□□□ 0.27
HDDC3-205ENST00000559898 NDUFS4O43181 175 aa16.73■□□□□ 0.27
HDDC3-205ENST00000559898 CLDN1O95832 211 aa16.73■□□□□ 0.27
HDDC3-205ENST00000559898 WDPCPO95876 746 aa16.73■□□□□ 0.27
HDDC3-205ENST00000559898 SERPIND1P05546 499 aa16.73■□□□□ 0.27
HDDC3-205ENST00000559898 ZNF888P0CJ79 500 aaPredicted RBP16.73■□□□□ 0.27
HDDC3-205ENST00000559898 HNF4AP41235 474 aa16.73■□□□□ 0.27
HDDC3-205ENST00000559898 PAFAH1B1P43034 410 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms