RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 OR4D9Q8NGE8 314 aa9.98□□□□□ -0.81
TPM1-221ENST00000559831 N4BP2L2Q92802 583 aaPredicted RBP9.98□□□□□ -0.81
TPM1-221ENST00000559831 RERGQ96A58 199 aaPredicted RBP9.98□□□□□ -0.81
TPM1-221ENST00000559831 TCTN2Q96GX1 697 aa9.98□□□□□ -0.81
TPM1-221ENST00000559831 SEC16BQ96JE7 1060 aa9.98□□□□□ -0.81
TPM1-221ENST00000559831 CCDC74BQ96LY2 380 aa9.98□□□□□ -0.81
TPM1-221ENST00000559831 CCT7Q99832 543 aa9.98□□□□□ -0.81
TPM1-221ENST00000559831 DPYSL5Q9BPU6 564 aa9.98□□□□□ -0.81
TPM1-221ENST00000559831 MACROD1Q9BQ69 325 aa9.98□□□□□ -0.81
TPM1-221ENST00000559831 ACPTQ9BZG2 426 aa9.98□□□□□ -0.81
TPM1-221ENST00000559831 RHBGQ9H310 441 aa9.98□□□□□ -0.81
TPM1-221ENST00000559831 OR51B5Q9H339 312 aa9.98□□□□□ -0.81
TPM1-221ENST00000559831 AKTIPQ9H8T0 292 aa9.98□□□□□ -0.81
TPM1-221ENST00000559831 SYNPO2LQ9H987 977 aa9.98□□□□□ -0.81
TPM1-221ENST00000559831 FAM60AQ9NP50 221 aa9.98□□□□□ -0.81
TPM1-221ENST00000559831 PDE7BQ9NP56 450 aa9.98□□□□□ -0.81
TPM1-221ENST00000559831 TCF7L2Q9NQB0 619 aa9.98□□□□□ -0.81
TPM1-221ENST00000559831 IRAK4Q9NWZ3 460 aa9.98□□□□□ -0.81
TPM1-221ENST00000559831 ADGRE2Q9UHX3 823 aa9.98□□□□□ -0.81
TPM1-221ENST00000559831 ZFP69BQ9UJL9 534 aa9.98□□□□□ -0.81
TPM1-221ENST00000559831 PILRAQ9UKJ1 303 aa9.98□□□□□ -0.81
TPM1-221ENST00000559831 KLK4Q9Y5K2 254 aa9.98□□□□□ -0.81
TPM1-221ENST00000559831 PCNX2A6NKB5 2137 aa9.98□□□□□ -0.81
TPM1-221ENST00000559831 DMDP11532 3685 aa9.98□□□□□ -0.81
TPM1-221ENST00000559831 MYO15AQ9UKN7 3530 aa9.98□□□□□ -0.81
TPM1-221ENST00000559831 COL27A1Q8IZC6 1860 aaPredicted RBP9.98□□□□□ -0.81
TPM1-221ENST00000559831 VPS13AQ96RL7 3174 aa9.98□□□□□ -0.81
TPM1-221ENST00000559831 SPTBP11277 2137 aa9.97□□□□□ -0.81
TPM1-221ENST00000559831 KIF26BQ2KJY2 2108 aa9.97□□□□□ -0.81
TPM1-221ENST00000559831 LOC105369274A0A096LPK9 316 aa9.97□□□□□ -0.81
TPM1-221ENST00000559831 LOC102723532A0A0G2JNH3 316 aa9.97□□□□□ -0.81
TPM1-221ENST00000559831 IGHV5-10-1A0A0J9YXX1 117 aa9.97□□□□□ -0.81
TPM1-221ENST00000559831 E9PBE3 544 aa9.97□□□□□ -0.81
TPM1-221ENST00000559831 H0YGG7 62 aa9.97□□□□□ -0.81
TPM1-221ENST00000559831 FOXE1O00358 373 aaPredicted RBP9.97□□□□□ -0.81
TPM1-221ENST00000559831 SAP18O00422 153 aaKnown RBP9.97□□□□□ -0.81
TPM1-221ENST00000559831 NTN3O00634 580 aaPredicted RBP9.97□□□□□ -0.81
TPM1-221ENST00000559831 KLHL41O60662 606 aa9.97□□□□□ -0.81
TPM1-221ENST00000559831 PEX11AO75192 247 aa9.97□□□□□ -0.81
TPM1-221ENST00000559831 VPS4BO75351 444 aa9.97□□□□□ -0.81
TPM1-221ENST00000559831 CLEC3AO75596 197 aa9.97□□□□□ -0.81
TPM1-221ENST00000559831 ETHE1O95571 254 aa9.97□□□□□ -0.81
TPM1-221ENST00000559831 THRAP10827 490 aa9.97□□□□□ -0.81
TPM1-221ENST00000559831 HSD3B1P14060 373 aa9.97□□□□□ -0.81
TPM1-221ENST00000559831 HSD3B2P26439 372 aa9.97□□□□□ -0.81
TPM1-221ENST00000559831 RAP1GDS1P52306 607 aa9.97□□□□□ -0.81
TPM1-221ENST00000559831 VSX2P58304 361 aaPredicted RBP9.97□□□□□ -0.81
TPM1-221ENST00000559831 ARF3P61204 181 aaPredicted RBP9.97□□□□□ -0.81
TPM1-221ENST00000559831 HSD11B2P80365 405 aa9.97□□□□□ -0.81
TPM1-221ENST00000559831 ZNF33BQ06732 778 aa9.97□□□□□ -0.81
TPM1-221ENST00000559831 RGS1Q08116 209 aa9.97□□□□□ -0.81
TPM1-221ENST00000559831 KCNAB1Q14722 419 aa9.97□□□□□ -0.81
TPM1-221ENST00000559831 TRIP6Q15654 476 aaKnown RBP9.97□□□□□ -0.81
TPM1-221ENST00000559831 CLPPQ16740 277 aaPredicted RBP9.97□□□□□ -0.81
TPM1-221ENST00000559831 LSM12Q3MHD2 195 aaKnown RBP9.97□□□□□ -0.81
TPM1-221ENST00000559831 ATP6AP1LQ52LC2 224 aa9.97□□□□□ -0.81
TPM1-221ENST00000559831 ZC3H12BQ5HYM0 836 aaKnown RBP9.97□□□□□ -0.81
TPM1-221ENST00000559831 TOR1AIP1Q5JTV8 583 aa9.97□□□□□ -0.81
TPM1-221ENST00000559831 TMTC4Q5T4D3 741 aa9.97□□□□□ -0.81
TPM1-221ENST00000559831 C10orf62Q5T681 223 aaPredicted RBP9.97□□□□□ -0.81
TPM1-221ENST00000559831 FRMPD2BQ6IN97 320 aa9.97□□□□□ -0.81
TPM1-221ENST00000559831 RNF165Q6ZSG1 346 aa9.97□□□□□ -0.81
TPM1-221ENST00000559831 Q6ZSR9 355 aa9.97□□□□□ -0.81
TPM1-221ENST00000559831 TRIM46Q7Z4K8 759 aa9.97□□□□□ -0.81
TPM1-221ENST00000559831 VN1R4Q7Z5H5 301 aa9.97□□□□□ -0.81
TPM1-221ENST00000559831 ALYREFQ86V81 257 aaKnown RBP9.97□□□□□ -0.81
TPM1-221ENST00000559831 MCATQ8IVS2 390 aaKnown RBP9.97□□□□□ -0.81
TPM1-221ENST00000559831 CACNA2D3Q8IZS8 1091 aa9.97□□□□□ -0.81
TPM1-221ENST00000559831 OR4N4Q8N0Y3 316 aa9.97□□□□□ -0.81
TPM1-221ENST00000559831 CARFQ8N187 725 aa9.97□□□□□ -0.81
TPM1-221ENST00000559831 DNAJC22Q8N4W6 341 aa9.97□□□□□ -0.81
TPM1-221ENST00000559831 GBP7Q8N8V2 638 aaPredicted RBP9.97□□□□□ -0.81
TPM1-221ENST00000559831 RCBTB1Q8NDN9 531 aa9.97□□□□□ -0.81
TPM1-221ENST00000559831 TRPV3Q8NET8 790 aa9.97□□□□□ -0.81
TPM1-221ENST00000559831 ACTRT2Q8TDY3 377 aa9.97□□□□□ -0.81
TPM1-221ENST00000559831 SLC13A3Q8WWT9 602 aa9.97□□□□□ -0.81
TPM1-221ENST00000559831 THAP11Q96EK4 314 aa9.97□□□□□ -0.81
TPM1-221ENST00000559831 CMTM7Q96FZ5 175 aa9.97□□□□□ -0.81
TPM1-221ENST00000559831 MARK4Q96L34 752 aa9.97□□□□□ -0.81
TPM1-221ENST00000559831 PPP3R2Q96LZ3 170 aa9.97□□□□□ -0.81
TPM1-221ENST00000559831 OR2A5Q96R48 311 aa9.97□□□□□ -0.81
TPM1-221ENST00000559831 SERPINI1Q99574 410 aa9.97□□□□□ -0.81
TPM1-221ENST00000559831 CCDC28BQ9BUN5 200 aa9.97□□□□□ -0.81
TPM1-221ENST00000559831 SARGQ9BW04 601 aa9.97□□□□□ -0.81
TPM1-221ENST00000559831 MS4A8Q9BY19 250 aa9.97□□□□□ -0.81
TPM1-221ENST00000559831 BRF2Q9HAW0 419 aa9.97□□□□□ -0.81
TPM1-221ENST00000559831 VPS29Q9UBQ0 182 aa9.97□□□□□ -0.81
TPM1-221ENST00000559831 ARL2BPQ9Y2Y0 163 aa9.97□□□□□ -0.81
TPM1-221ENST00000559831 TSC22D4Q9Y3Q8 395 aa9.97□□□□□ -0.81
TPM1-221ENST00000559831 AP1M2Q9Y6Q5 423 aa9.97□□□□□ -0.81
TPM1-221ENST00000559831 LAMA1P25391 3075 aa9.96□□□□□ -0.81
TPM1-221ENST00000559831 SERTM1A2A2V5 107 aa9.96□□□□□ -0.82
TPM1-221ENST00000559831 LSM1O15116 133 aaKnown RBP9.96□□□□□ -0.82
TPM1-221ENST00000559831 P2RX6O15547 441 aa9.96□□□□□ -0.82
TPM1-221ENST00000559831 HCRTR1O43613 425 aa9.96□□□□□ -0.82
TPM1-221ENST00000559831 GFRA3O60609 400 aa9.96□□□□□ -0.82
TPM1-221ENST00000559831 SEC22BO75396 215 aa9.96□□□□□ -0.82
TPM1-221ENST00000559831 RSL1D1O76021 490 aaKnown RBP9.96□□□□□ -0.82
TPM1-221ENST00000559831 SLC35G6P0C7Q6 338 aa9.96□□□□□ -0.82
TPM1-221ENST00000559831 LBPP18428 481 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms