RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 LZICQ8WZA0 190 aa9.68□□□□□ -0.86
LRRC28-216ENST00000559819 TBC1D20Q96BZ9 403 aa9.68□□□□□ -0.86
LRRC28-216ENST00000559819 AP2M1Q96CW1 435 aa9.68□□□□□ -0.86
LRRC28-216ENST00000559819 TCF25Q9BQ70 676 aa9.68□□□□□ -0.86
LRRC28-216ENST00000559819 ZSCAN5AQ9BUG6 496 aa9.68□□□□□ -0.86
LRRC28-216ENST00000559819 REEP1Q9H902 201 aa9.68□□□□□ -0.86
LRRC28-216ENST00000559819 TMEM184CQ9NVA4 438 aa9.68□□□□□ -0.86
LRRC28-216ENST00000559819 GULP1Q9UBP9 304 aa9.68□□□□□ -0.86
LRRC28-216ENST00000559819 IL36AQ9UHA7 158 aa9.68□□□□□ -0.86
LRRC28-216ENST00000559819 ACSL6Q9UKU0 697 aa9.68□□□□□ -0.86
LRRC28-216ENST00000559819 PLK4O00444 970 aa9.67□□□□□ -0.86
LRRC28-216ENST00000559819 FAM20BO75063 409 aa9.67□□□□□ -0.86
LRRC28-216ENST00000559819 VIPP01282 170 aa9.67□□□□□ -0.86
LRRC28-216ENST00000559819 ADH1AP07327 375 aa9.67□□□□□ -0.86
LRRC28-216ENST00000559819 HNRNPCP07910 306 aaKnown RBP eCLIP9.67□□□□□ -0.86
LRRC28-216ENST00000559819 ELFN1P0C7U0 828 aa9.67□□□□□ -0.86
LRRC28-216ENST00000559819 ETFAP13804 333 aa9.67□□□□□ -0.86
LRRC28-216ENST00000559819 ZNF8P17098 575 aaPredicted RBP9.67□□□□□ -0.86
LRRC28-216ENST00000559819 PSMB9P28065 219 aa9.67□□□□□ -0.86
LRRC28-216ENST00000559819 RRM2P31350 389 aa9.67□□□□□ -0.86
LRRC28-216ENST00000559819 IDUAP35475 653 aa9.67□□□□□ -0.86
LRRC28-216ENST00000559819 PPM1AP35813 382 aa9.67□□□□□ -0.86
LRRC28-216ENST00000559819 KRT20P35900 424 aa9.67□□□□□ -0.86
LRRC28-216ENST00000559819 HNF4AP41235 474 aa9.67□□□□□ -0.86
LRRC28-216ENST00000559819 TBPL1P62380 186 aa9.67□□□□□ -0.86
LRRC28-216ENST00000559819 SLC35A2P78381 396 aa9.67□□□□□ -0.86
LRRC28-216ENST00000559819 CREMQ03060 361 aa9.67□□□□□ -0.86
LRRC28-216ENST00000559819 FOXD4Q12950 439 aaPredicted RBP9.67□□□□□ -0.86
LRRC28-216ENST00000559819 KEAP1Q14145 624 aa9.67□□□□□ -0.86
LRRC28-216ENST00000559819 STARD3Q14849 445 aa9.67□□□□□ -0.86
LRRC28-216ENST00000559819 MAD2L1BPQ15013 274 aaPredicted RBP9.67□□□□□ -0.86
LRRC28-216ENST00000559819 RGNQ15493 299 aa9.67□□□□□ -0.86
LRRC28-216ENST00000559819 CYP27C1Q4G0S4 372 aa9.67□□□□□ -0.86
LRRC28-216ENST00000559819 TSEN54Q7Z6J9 526 aaKnown RBP9.67□□□□□ -0.86
LRRC28-216ENST00000559819 CENPSQ8N2Z9 138 aa9.67□□□□□ -0.86
LRRC28-216ENST00000559819 ZNF540Q8NDQ6 660 aa9.67□□□□□ -0.86
LRRC28-216ENST00000559819 SETD9Q8NE22 299 aa9.67□□□□□ -0.86
LRRC28-216ENST00000559819 VN1R2Q8NFZ6 395 aa9.67□□□□□ -0.86
LRRC28-216ENST00000559819 OR56A3Q8NH54 315 aa9.67□□□□□ -0.86
LRRC28-216ENST00000559819 WDR48Q8TAF3 677 aa9.67□□□□□ -0.86
LRRC28-216ENST00000559819 CHTF18Q8WVB6 975 aa9.67□□□□□ -0.86
LRRC28-216ENST00000559819 RORBQ92753 470 aa9.67□□□□□ -0.86
LRRC28-216ENST00000559819 GLMNQ92990 594 aa9.67□□□□□ -0.86
LRRC28-216ENST00000559819 C7orf34Q96L11 122 aa9.67□□□□□ -0.86
LRRC28-216ENST00000559819 MAGEB10Q96LZ2 347 aaPredicted RBP9.67□□□□□ -0.86
LRRC28-216ENST00000559819 TOX2Q96NM4 488 aa9.67□□□□□ -0.86
LRRC28-216ENST00000559819 KCNC2Q96PR1 638 aa9.67□□□□□ -0.86
LRRC28-216ENST00000559819 CCM2Q9BSQ5 444 aa9.67□□□□□ -0.86
LRRC28-216ENST00000559819 ASPSCR1Q9BZE9 553 aa9.67□□□□□ -0.86
LRRC28-216ENST00000559819 SPNS1Q9H2V7 528 aa9.67□□□□□ -0.86
LRRC28-216ENST00000559819 NDRG4Q9ULP0 352 aaKnown RBP9.67□□□□□ -0.86
LRRC28-216ENST00000559819 TESMINQ9Y4I5 508 aa9.67□□□□□ -0.86
LRRC28-216ENST00000559819 MGAT4DA6NG13 374 aa9.67□□□□□ -0.86
LRRC28-216ENST00000559819 BOLA2-SMG1P6H3BVE0 249 aa9.67□□□□□ -0.86
LRRC28-216ENST00000559819 K7ESM1 405 aa9.67□□□□□ -0.86
LRRC28-216ENST00000559819 JRKO75564 520 aa9.67□□□□□ -0.86
LRRC28-216ENST00000559819 LINC00271P0C7V0 271 aa9.67□□□□□ -0.86
LRRC28-216ENST00000559819 SYN1P17600 705 aa9.67□□□□□ -0.86
LRRC28-216ENST00000559819 TIA1P31483 386 aaKnown RBP eCLIP9.67□□□□□ -0.86
LRRC28-216ENST00000559819 CRATP43155 626 aa9.67□□□□□ -0.86
LRRC28-216ENST00000559819 PRLHRP49683 370 aa9.67□□□□□ -0.86
LRRC28-216ENST00000559819 VBP1P61758 197 aa9.67□□□□□ -0.86
LRRC28-216ENST00000559819 RPP38P78345 283 aaKnown RBP9.67□□□□□ -0.86
LRRC28-216ENST00000559819 FPGSQ05932 587 aa9.67□□□□□ -0.86
LRRC28-216ENST00000559819 MESP2Q0VG99 397 aa9.67□□□□□ -0.86
LRRC28-216ENST00000559819 ITGADQ13349 1161 aa9.67□□□□□ -0.86
LRRC28-216ENST00000559819 SLBPQ14493 270 aaKnown RBP eCLIP9.67□□□□□ -0.86
LRRC28-216ENST00000559819 PRSS53Q2L4Q9 553 aa9.67□□□□□ -0.86
LRRC28-216ENST00000559819 ADPRMQ3LIE5 342 aa9.67□□□□□ -0.86
LRRC28-216ENST00000559819 TCEAL5Q5H9L2 206 aa9.67□□□□□ -0.86
LRRC28-216ENST00000559819 KIAA1614Q5VZ46 1190 aa9.67□□□□□ -0.86
LRRC28-216ENST00000559819 TMEM236Q5W0B7 351 aa9.67□□□□□ -0.86
LRRC28-216ENST00000559819 GPR153Q6NV75 609 aa9.67□□□□□ -0.86
LRRC28-216ENST00000559819 LIPIQ6XZB0 460 aa9.67□□□□□ -0.86
LRRC28-216ENST00000559819 SLCO4C1Q6ZQN7 724 aa9.67□□□□□ -0.86
LRRC28-216ENST00000559819 DCDC5Q6ZRR9 648 aa9.67□□□□□ -0.86
LRRC28-216ENST00000559819 DPPA4Q7L190 304 aa9.67□□□□□ -0.86
LRRC28-216ENST00000559819 ZNF554Q86TJ5 538 aa9.67□□□□□ -0.86
LRRC28-216ENST00000559819 IGFN1Q86VF2 1251 aa9.67□□□□□ -0.86
LRRC28-216ENST00000559819 SNX29P2Q8IUI4 249 aa9.67□□□□□ -0.86
LRRC28-216ENST00000559819 SYTL1Q8IYJ3 562 aa9.67□□□□□ -0.86
LRRC28-216ENST00000559819 CFAP206Q8IYR0 622 aa9.67□□□□□ -0.86
LRRC28-216ENST00000559819 ST13P5Q8NFI4 369 aaPredicted RBP9.67□□□□□ -0.86
LRRC28-216ENST00000559819 ZNF480Q8WV37 535 aa9.67□□□□□ -0.86
LRRC28-216ENST00000559819 APH1BQ8WW43 257 aa9.67□□□□□ -0.86
LRRC28-216ENST00000559819 ATL1Q8WXF7 558 aa9.67□□□□□ -0.86
LRRC28-216ENST00000559819 CIDECQ96AQ7 238 aaPredicted RBP9.67□□□□□ -0.86
LRRC28-216ENST00000559819 DUSP21Q9H596 190 aa9.67□□□□□ -0.86
LRRC28-216ENST00000559819 GPATCH2Q9NW75 528 aa9.67□□□□□ -0.86
LRRC28-216ENST00000559819 TPRKBQ9Y3C4 175 aa9.67□□□□□ -0.86
LRRC28-216ENST00000559819 PLXNA2O75051 1894 aa9.66□□□□□ -0.86
LRRC28-216ENST00000559819 CXorf51AA0A1B0GTR3 108 aa9.66□□□□□ -0.86
LRRC28-216ENST00000559819 M0QX08 132 aa9.66□□□□□ -0.86
LRRC28-216ENST00000559819 PCDHGA12O60330 932 aa9.66□□□□□ -0.86
LRRC28-216ENST00000559819 C6orf47O95873 294 aa9.66□□□□□ -0.86
LRRC28-216ENST00000559819 TGFB1P01137 390 aa9.66□□□□□ -0.86
LRRC28-216ENST00000559819 C9P02748 559 aa9.66□□□□□ -0.86
LRRC28-216ENST00000559819 RHOP08100 348 aa9.66□□□□□ -0.86
LRRC28-216ENST00000559819 CLTBP09497 229 aa9.66□□□□□ -0.86
LRRC28-216ENST00000559819 JUNDP17535 347 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms