RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 MFAP3P55082 362 aa3.35□□□□□ -1.87
SPG11-218ENST00000559754 SNRPEP62304 92 aaKnown RBP3.35□□□□□ -1.87
SPG11-218ENST00000559754 DLK1P80370 383 aa3.35□□□□□ -1.87
SPG11-218ENST00000559754 TSTA3Q13630 321 aaPredicted RBP3.35□□□□□ -1.87
SPG11-218ENST00000559754 IFI44LQ53G44 452 aa3.35□□□□□ -1.87
SPG11-218ENST00000559754 PRAMEF8Q5VWM4 474 aa3.35□□□□□ -1.87
SPG11-218ENST00000559754 ALS2CLQ60I27 953 aa3.35□□□□□ -1.87
SPG11-218ENST00000559754 ISLR2Q6UXK2 745 aa3.35□□□□□ -1.87
SPG11-218ENST00000559754 RGS9BPQ6ZS82 235 aa3.35□□□□□ -1.87
SPG11-218ENST00000559754 PTOV1Q86YD1 416 aa3.35□□□□□ -1.87
SPG11-218ENST00000559754 SERPINA12Q8IW75 414 aa3.35□□□□□ -1.87
SPG11-218ENST00000559754 BATF2Q8N1L9 274 aa3.35□□□□□ -1.87
SPG11-218ENST00000559754 OR52E1Q8NGJ3 308 aa3.35□□□□□ -1.87
SPG11-218ENST00000559754 SHC3Q92529 594 aa3.35□□□□□ -1.87
SPG11-218ENST00000559754 MOB3AQ96BX8 217 aa3.35□□□□□ -1.87
SPG11-218ENST00000559754 SGF29Q96ES7 293 aa3.35□□□□□ -1.87
SPG11-218ENST00000559754 C14orf79Q96F83 325 aa3.35□□□□□ -1.87
SPG11-218ENST00000559754 SENP5Q96HI0 755 aaPredicted RBP3.35□□□□□ -1.87
SPG11-218ENST00000559754 SAMD8Q96LT4 415 aa3.35□□□□□ -1.87
SPG11-218ENST00000559754 ZNF560Q96MR9 790 aa3.35□□□□□ -1.87
SPG11-218ENST00000559754 GDAP1L1Q96MZ0 367 aa3.35□□□□□ -1.87
SPG11-218ENST00000559754 SFXN2Q96NB2 322 aa3.35□□□□□ -1.87
SPG11-218ENST00000559754 PANX3Q96QZ0 392 aa3.35□□□□□ -1.87
SPG11-218ENST00000559754 GFI1Q99684 422 aa3.35□□□□□ -1.87
SPG11-218ENST00000559754 TEX13AQ9BXU3 409 aaPredicted RBP3.35□□□□□ -1.87
SPG11-218ENST00000559754 LSG1Q9H089 658 aaKnown RBP3.35□□□□□ -1.87
SPG11-218ENST00000559754 RCC2Q9P258 522 aaKnown RBP3.35□□□□□ -1.87
SPG11-218ENST00000559754 KCNN3Q9UGI6 736 aa3.35□□□□□ -1.87
SPG11-218ENST00000559754 CTNNA3Q9UI47 895 aa3.35□□□□□ -1.87
SPG11-218ENST00000559754 SMAD5-AS1Q9Y6J3 95 aa3.35□□□□□ -1.87
SPG11-218ENST00000559754 FEZF1A0PJY2 475 aa3.34□□□□□ -1.87
SPG11-218ENST00000559754 NDUFAF8A1L188 74 aa3.34□□□□□ -1.87
SPG11-218ENST00000559754 FAM149AA5PLN7 773 aa3.34□□□□□ -1.87
SPG11-218ENST00000559754 TMEM221A6NGB7 291 aa3.34□□□□□ -1.87
SPG11-218ENST00000559754 ARHGAP42A6NI28 874 aa3.34□□□□□ -1.87
SPG11-218ENST00000559754 KRTAP9-6A8MVA2 160 aa3.34□□□□□ -1.87
SPG11-218ENST00000559754 J3QR06 171 aa3.34□□□□□ -1.87
SPG11-218ENST00000559754 TO15178 435 aa3.34□□□□□ -1.87
SPG11-218ENST00000559754 AP5Z1O43299 807 aa3.34□□□□□ -1.87
SPG11-218ENST00000559754 RIPK2O43353 540 aa3.34□□□□□ -1.87
SPG11-218ENST00000559754 XRCC3O43542 346 aa3.34□□□□□ -1.87
SPG11-218ENST00000559754 GPR137BO60478 399 aa3.34□□□□□ -1.87
SPG11-218ENST00000559754 ZNF217O75362 1048 aa3.34□□□□□ -1.87
SPG11-218ENST00000559754 NME6O75414 186 aaPredicted RBP3.34□□□□□ -1.87
SPG11-218ENST00000559754 TGFAP01135 160 aa3.34□□□□□ -1.87
SPG11-218ENST00000559754 SAGP10523 405 aaPredicted RBP3.34□□□□□ -1.87
SPG11-218ENST00000559754 HSPA5P11021 654 aaKnown RBP3.34□□□□□ -1.87
SPG11-218ENST00000559754 CD22P20273 847 aa3.34□□□□□ -1.87
SPG11-218ENST00000559754 HRH2P25021 359 aa3.34□□□□□ -1.87
SPG11-218ENST00000559754 AZGP1P25311 298 aaKnown RBP3.34□□□□□ -1.87
SPG11-218ENST00000559754 DNAJB1P25685 340 aa3.34□□□□□ -1.87
SPG11-218ENST00000559754 HSD17B3P37058 310 aa3.34□□□□□ -1.87
SPG11-218ENST00000559754 IER3P46695 156 aa3.34□□□□□ -1.87
SPG11-218ENST00000559754 LHX1P48742 406 aa3.34□□□□□ -1.87
SPG11-218ENST00000559754 SLC9A3P48764 834 aa3.34□□□□□ -1.87
SPG11-218ENST00000559754 MMP15P51511 669 aa3.34□□□□□ -1.87
SPG11-218ENST00000559754 CD81P60033 236 aa3.34□□□□□ -1.87
SPG11-218ENST00000559754 ARHGAP1Q07960 439 aa3.34□□□□□ -1.87
SPG11-218ENST00000559754 SCGB2A2Q13296 93 aa3.34□□□□□ -1.87
SPG11-218ENST00000559754 PDE7AQ13946 482 aa3.34□□□□□ -1.87
SPG11-218ENST00000559754 MAPK11Q15759 364 aa3.34□□□□□ -1.87
SPG11-218ENST00000559754 UGP2Q16851 508 aa3.34□□□□□ -1.87
SPG11-218ENST00000559754 CCDC40Q4G0X9 1142 aa3.34□□□□□ -1.87
SPG11-218ENST00000559754 FASTKD1Q53R41 847 aaKnown RBP3.34□□□□□ -1.87
SPG11-218ENST00000559754 KCTD11Q693B1 232 aa3.34□□□□□ -1.87
SPG11-218ENST00000559754 SLC25A24Q6NUK1 477 aa3.34□□□□□ -1.87
SPG11-218ENST00000559754 PODNL1Q6PEZ8 512 aa3.34□□□□□ -1.87
SPG11-218ENST00000559754 C1orf186Q6ZWK4 172 aa3.34□□□□□ -1.87
SPG11-218ENST00000559754 ZNF534Q76KX8 674 aa3.34□□□□□ -1.87
SPG11-218ENST00000559754 PIGWQ7Z7B1 504 aa3.34□□□□□ -1.87
SPG11-218ENST00000559754 SYVN1Q86TM6 617 aa3.34□□□□□ -1.87
SPG11-218ENST00000559754 GTSCR1Q86UQ5 136 aa3.34□□□□□ -1.87
SPG11-218ENST00000559754 GPALPP1Q8IXQ4 340 aa3.34□□□□□ -1.87
SPG11-218ENST00000559754 CFAP206Q8IYR0 622 aa3.34□□□□□ -1.87
SPG11-218ENST00000559754 LYG1Q8N1E2 194 aa3.34□□□□□ -1.87
SPG11-218ENST00000559754 CCNYQ8ND76 341 aa3.34□□□□□ -1.87
SPG11-218ENST00000559754 OR2T12Q8NG77 320 aa3.34□□□□□ -1.87
SPG11-218ENST00000559754 RNASE8Q8TDE3 154 aaKnown RBP3.34□□□□□ -1.87
SPG11-218ENST00000559754 SLC5A11Q8WWX8 675 aa3.34□□□□□ -1.87
SPG11-218ENST00000559754 CFAP36Q96G28 342 aa3.34□□□□□ -1.87
SPG11-218ENST00000559754 NSMCE2Q96MF7 247 aa3.34□□□□□ -1.87
SPG11-218ENST00000559754 SPATA33Q96N06 139 aa3.34□□□□□ -1.87
SPG11-218ENST00000559754 SPATA13Q96N96 652 aa3.34□□□□□ -1.87
SPG11-218ENST00000559754 MYADMQ96S97 322 aa3.34□□□□□ -1.87
SPG11-218ENST00000559754 C16orf70Q9BSU1 422 aa3.34□□□□□ -1.87
SPG11-218ENST00000559754 UBXN6Q9BZV1 441 aa3.34□□□□□ -1.87
SPG11-218ENST00000559754 MYNNQ9NPC7 610 aa3.34□□□□□ -1.87
SPG11-218ENST00000559754 NGBQ9NPG2 151 aa3.34□□□□□ -1.87
SPG11-218ENST00000559754 ANKMY1Q9P2S6 941 aa3.34□□□□□ -1.87
SPG11-218ENST00000559754 LAMP5Q9UJQ1 280 aa3.34□□□□□ -1.87
SPG11-218ENST00000559754 ABT1Q9ULW3 272 aaKnown RBP3.34□□□□□ -1.87
SPG11-218ENST00000559754 GPR132Q9UNW8 380 aa3.34□□□□□ -1.87
SPG11-218ENST00000559754 PLEKHA6Q9Y2H5 1048 aa3.34□□□□□ -1.87
SPG11-218ENST00000559754 WDR37Q9Y2I8 494 aa3.34□□□□□ -1.87
SPG11-218ENST00000559754 PADI2Q9Y2J8 665 aa3.34□□□□□ -1.87
SPG11-218ENST00000559754 MRPS28Q9Y2Q9 187 aaKnown RBP3.34□□□□□ -1.87
SPG11-218ENST00000559754 GRIP1Q9Y3R0 1128 aa3.34□□□□□ -1.87
SPG11-218ENST00000559754 ANGPTL3Q9Y5C1 460 aa3.34□□□□□ -1.87
SPG11-218ENST00000559754 STK36Q9NRP7 1315 aa3.34□□□□□ -1.87
SPG11-218ENST00000559754 KIAA1217Q5T5P2 1943 aa3.34□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms