RNA–Protein interactions for RNA: ENST00000559686.3

SNRPA1-208, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-208ENST00000559686 C16orf52Q8NHV5 167 aa8.38□□□□□ -1.07
SNRPA1-208ENST00000559686 CTNNBL1Q8WYA6 563 aaPredicted RBP8.38□□□□□ -1.07
SNRPA1-208ENST00000559686 P3H4Q92791 437 aa8.38□□□□□ -1.07
SNRPA1-208ENST00000559686 TSLPQ969D9 159 aa8.38□□□□□ -1.07
SNRPA1-208ENST00000559686 QKIQ96PU8 341 aaKnown RBP eCLIP8.38□□□□□ -1.07
SNRPA1-208ENST00000559686 ALS2CR12Q96Q35 445 aa8.38□□□□□ -1.07
SNRPA1-208ENST00000559686 SMC6Q96SB8 1091 aa8.38□□□□□ -1.07
SNRPA1-208ENST00000559686 LPAR4Q99677 370 aa8.38□□□□□ -1.07
SNRPA1-208ENST00000559686 MACROD1Q9BQ69 325 aa8.38□□□□□ -1.07
SNRPA1-208ENST00000559686 TBL1YQ9BQ87 522 aa8.38□□□□□ -1.07
SNRPA1-208ENST00000559686 RAB11FIP5Q9BXF6 653 aa8.38□□□□□ -1.07
SNRPA1-208ENST00000559686 HSD3B7Q9H2F3 369 aa8.38□□□□□ -1.07
SNRPA1-208ENST00000559686 MRPS30Q9NP92 439 aaKnown RBP8.38□□□□□ -1.07
SNRPA1-208ENST00000559686 NLE1Q9NVX2 485 aaPredicted RBP8.38□□□□□ -1.07
SNRPA1-208ENST00000559686 PCYOX1Q9UHG3 505 aa8.38□□□□□ -1.07
SNRPA1-208ENST00000559686 TRHDEQ9UKU6 1024 aa8.38□□□□□ -1.07
SNRPA1-208ENST00000559686 R3HDM2Q9Y2K5 976 aaKnown RBP8.38□□□□□ -1.07
SNRPA1-208ENST00000559686 FAM215AQ9Y5M1 114 aa8.38□□□□□ -1.07
SNRPA1-208ENST00000559686 LIPGQ9Y5X9 500 aa8.38□□□□□ -1.07
SNRPA1-208ENST00000559686 STAB1Q9NY15 2570 aa8.38□□□□□ -1.07
SNRPA1-208ENST00000559686 CCDC162PA2VCL2 907 aa8.37□□□□□ -1.07
SNRPA1-208ENST00000559686 PINLYPA6NC86 204 aa8.37□□□□□ -1.07
SNRPA1-208ENST00000559686 ZNF860A6NHJ4 632 aa8.37□□□□□ -1.07
SNRPA1-208ENST00000559686 FIGNL2A6NMB9 653 aa8.37□□□□□ -1.07
SNRPA1-208ENST00000559686 A8MUA0 341 aa8.37□□□□□ -1.07
SNRPA1-208ENST00000559686 ARHGEF33A8MVX0 844 aa8.37□□□□□ -1.07
SNRPA1-208ENST00000559686 G3V3Y1 287 aa8.37□□□□□ -1.07
SNRPA1-208ENST00000559686 SGK494L7N484 410 aa8.37□□□□□ -1.07
SNRPA1-208ENST00000559686 ARHGEF9O43307 516 aa8.37□□□□□ -1.07
SNRPA1-208ENST00000559686 APOA4P06727 396 aa8.37□□□□□ -1.07
SNRPA1-208ENST00000559686 CD53P19397 219 aa8.37□□□□□ -1.07
SNRPA1-208ENST00000559686 RPA3P35244 121 aaPredicted RBP8.37□□□□□ -1.07
SNRPA1-208ENST00000559686 NR2C2P49116 596 aa8.37□□□□□ -1.07
SNRPA1-208ENST00000559686 HLCSP50747 726 aa8.37□□□□□ -1.07
SNRPA1-208ENST00000559686 OR4D2P58180 307 aa8.37□□□□□ -1.07
SNRPA1-208ENST00000559686 PPIAP62937 165 aaKnown RBP8.37□□□□□ -1.07
SNRPA1-208ENST00000559686 PLOD1Q02809 727 aaPredicted RBP8.37□□□□□ -1.07
SNRPA1-208ENST00000559686 PRPSAP1Q14558 356 aa8.37□□□□□ -1.07
SNRPA1-208ENST00000559686 ITIH4Q14624 930 aa8.37□□□□□ -1.07
SNRPA1-208ENST00000559686 NSDHLQ15738 373 aa8.37□□□□□ -1.07
SNRPA1-208ENST00000559686 SLC25A35Q3KQZ1 300 aa8.37□□□□□ -1.07
SNRPA1-208ENST00000559686 ITPRIPL1Q6GPH6 555 aa8.37□□□□□ -1.07
SNRPA1-208ENST00000559686 RTL6Q6ICC9 239 aa8.37□□□□□ -1.07
SNRPA1-208ENST00000559686 DENND5AQ6IQ26 1287 aa8.37□□□□□ -1.07
SNRPA1-208ENST00000559686 HMBOX1Q6NT76 420 aa8.37□□□□□ -1.07
SNRPA1-208ENST00000559686 MDGA2Q7Z553 956 aa8.37□□□□□ -1.07
SNRPA1-208ENST00000559686 PAQR7Q86WK9 346 aa8.37□□□□□ -1.07
SNRPA1-208ENST00000559686 CYP4Z2PQ8N1L4 340 aa8.37□□□□□ -1.07
SNRPA1-208ENST00000559686 GSDMBQ8TAX9 411 aa8.37□□□□□ -1.07
SNRPA1-208ENST00000559686 LINC01560Q8TB33 94 aa8.37□□□□□ -1.07
SNRPA1-208ENST00000559686 ZCCHC10Q8TBK6 192 aa8.37□□□□□ -1.07
SNRPA1-208ENST00000559686 FAM222BQ8WU58 562 aa8.37□□□□□ -1.07
SNRPA1-208ENST00000559686 ASZ1Q8WWH4 475 aa8.37□□□□□ -1.07
SNRPA1-208ENST00000559686 RAD51AP1Q96B01 352 aa8.37□□□□□ -1.07
SNRPA1-208ENST00000559686 UCN2Q96RP3 112 aa8.37□□□□□ -1.07
SNRPA1-208ENST00000559686 VAT1Q99536 393 aa8.37□□□□□ -1.07
SNRPA1-208ENST00000559686 CNPPD1Q9BV87 410 aa8.37□□□□□ -1.07
SNRPA1-208ENST00000559686 CHMP5Q9NZZ3 219 aa8.37□□□□□ -1.07
SNRPA1-208ENST00000559686 UVRAGQ9P2Y5 699 aa8.37□□□□□ -1.07
SNRPA1-208ENST00000559686 ZANQ9Y493 2812 aa8.37□□□□□ -1.07
SNRPA1-208ENST00000559686 IGKV1-8A0A0C4DH67 115 aa8.36□□□□□ -1.07
SNRPA1-208ENST00000559686 H7C0S8 307 aa8.36□□□□□ -1.07
SNRPA1-208ENST00000559686 HAT1O14929 419 aa8.36□□□□□ -1.07
SNRPA1-208ENST00000559686 RDH16O75452 317 aa8.36□□□□□ -1.07
SNRPA1-208ENST00000559686 GPC4O75487 556 aa8.36□□□□□ -1.07
SNRPA1-208ENST00000559686 FKBP9O95302 570 aa8.36□□□□□ -1.07
SNRPA1-208ENST00000559686 C1orf105O95561 183 aa8.36□□□□□ -1.07
SNRPA1-208ENST00000559686 SERPING1P05155 500 aa8.36□□□□□ -1.07
SNRPA1-208ENST00000559686 H2AFZP0C0S5 128 aa8.36□□□□□ -1.07
SNRPA1-208ENST00000559686 FOXN2P32314 431 aa8.36□□□□□ -1.07
SNRPA1-208ENST00000559686 CDKN2BP42772 138 aa8.36□□□□□ -1.07
SNRPA1-208ENST00000559686 SERPINB4P48594 390 aa8.36□□□□□ -1.07
SNRPA1-208ENST00000559686 MLF1P58340 268 aa8.36□□□□□ -1.07
SNRPA1-208ENST00000559686 HYAL2Q12891 473 aa8.36□□□□□ -1.07
SNRPA1-208ENST00000559686 NDUFA9Q16795 377 aa8.36□□□□□ -1.07
SNRPA1-208ENST00000559686 FILIP1LQ4L180 1135 aa8.36□□□□□ -1.07
SNRPA1-208ENST00000559686 CCDC38Q502W7 563 aa8.36□□□□□ -1.07
SNRPA1-208ENST00000559686 C1orf185Q5T7R7 199 aa8.36□□□□□ -1.07
SNRPA1-208ENST00000559686 CCDC181Q5TID7 509 aa8.36□□□□□ -1.07
SNRPA1-208ENST00000559686 GARNL3Q5VVW2 1013 aa8.36□□□□□ -1.07
SNRPA1-208ENST00000559686 PAOXQ6QHF9 649 aa8.36□□□□□ -1.07
SNRPA1-208ENST00000559686 PACS1Q6VY07 963 aa8.36□□□□□ -1.07
SNRPA1-208ENST00000559686 H2AFVQ71UI9 128 aa8.36□□□□□ -1.07
SNRPA1-208ENST00000559686 LDB1Q86U70 411 aaPredicted RBP8.36□□□□□ -1.07
SNRPA1-208ENST00000559686 ARHGEF39Q8N4T4 335 aa8.36□□□□□ -1.07
SNRPA1-208ENST00000559686 TMEM156Q8N614 296 aa8.36□□□□□ -1.07
SNRPA1-208ENST00000559686 RELL2Q8NC24 303 aaPredicted RBP8.36□□□□□ -1.07
SNRPA1-208ENST00000559686 PPFIBP2Q8ND30 876 aa8.36□□□□□ -1.07
SNRPA1-208ENST00000559686 KIAA1191Q96A73 305 aa8.36□□□□□ -1.07
SNRPA1-208ENST00000559686 PEX11GQ96HA9 241 aa8.36□□□□□ -1.07
SNRPA1-208ENST00000559686 CCDC138Q96M89 665 aa8.36□□□□□ -1.07
SNRPA1-208ENST00000559686 OR2A5Q96R48 311 aa8.36□□□□□ -1.07
SNRPA1-208ENST00000559686 FAM118BQ9BPY3 351 aa8.36□□□□□ -1.07
SNRPA1-208ENST00000559686 YIPF4Q9BSR8 244 aa8.36□□□□□ -1.07
SNRPA1-208ENST00000559686 HEMGNQ9BXL5 484 aa8.36□□□□□ -1.07
SNRPA1-208ENST00000559686 EXO5Q9H790 373 aa8.36□□□□□ -1.07
SNRPA1-208ENST00000559686 PLEKHF2Q9H8W4 249 aa8.36□□□□□ -1.07
SNRPA1-208ENST00000559686 BEX4Q9NWD9 120 aaPredicted RBP8.36□□□□□ -1.07
SNRPA1-208ENST00000559686 TRMT1Q9NXH9 659 aaKnown RBP8.36□□□□□ -1.07
SNRPA1-208ENST00000559686 KCMF1Q9P0J7 381 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms