RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 Q6ZPB1 254 aaPredicted RBP12.35□□□□□ -0.43
TPM1-220ENST00000559556 UBE2R2Q712K3 238 aaPredicted RBP12.35□□□□□ -0.43
TPM1-220ENST00000559556 CRLF3Q8IUI8 442 aa12.35□□□□□ -0.43
TPM1-220ENST00000559556 SPNS2Q8IVW8 549 aa12.35□□□□□ -0.43
TPM1-220ENST00000559556 DENND6AQ8IWF6 608 aa12.35□□□□□ -0.43
TPM1-220ENST00000559556 SHISA5Q8N114 240 aa12.35□□□□□ -0.43
TPM1-220ENST00000559556 SPC24Q8NBT2 197 aa12.35□□□□□ -0.43
TPM1-220ENST00000559556 MCOLN3Q8TDD5 553 aa12.35□□□□□ -0.43
TPM1-220ENST00000559556 THAP3Q8WTV1 239 aaPredicted RBP12.35□□□□□ -0.43
TPM1-220ENST00000559556 TM4SF19Q96DZ7 209 aa12.35□□□□□ -0.43
TPM1-220ENST00000559556 THAP11Q96EK4 314 aa12.35□□□□□ -0.43
TPM1-220ENST00000559556 SCMH1Q96GD3 660 aa12.35□□□□□ -0.43
TPM1-220ENST00000559556 SIGLEC12Q96PQ1 595 aa12.35□□□□□ -0.43
TPM1-220ENST00000559556 GPR21Q99679 349 aa12.35□□□□□ -0.43
TPM1-220ENST00000559556 NPAS2Q99743 824 aa12.35□□□□□ -0.43
TPM1-220ENST00000559556 TRIM8Q9BZR9 551 aa12.35□□□□□ -0.43
TPM1-220ENST00000559556 PCBD2Q9H0N5 130 aa12.35□□□□□ -0.43
TPM1-220ENST00000559556 FBXO6Q9NRD1 293 aaPredicted RBP12.35□□□□□ -0.43
TPM1-220ENST00000559556 HOMER3Q9NSC5 361 aa12.35□□□□□ -0.43
TPM1-220ENST00000559556 HCN3Q9P1Z3 774 aa12.35□□□□□ -0.43
TPM1-220ENST00000559556 SH3BGRL2Q9UJC5 107 aa12.35□□□□□ -0.43
TPM1-220ENST00000559556 SH2B3Q9UQQ2 575 aa12.35□□□□□ -0.43
TPM1-220ENST00000559556 ZNF835Q9Y2P0 537 aa12.35□□□□□ -0.43
TPM1-220ENST00000559556 ABCA4P78363 2273 aa12.35□□□□□ -0.43
TPM1-220ENST00000559556 ZCWPW2A0A1B0GU75 182 aa12.34□□□□□ -0.43
TPM1-220ENST00000559556 MAGEB16A2A368 324 aa12.34□□□□□ -0.43
TPM1-220ENST00000559556 ASPDHA6ND91 283 aa12.34□□□□□ -0.43
TPM1-220ENST00000559556 A8MUI8 341 aa12.34□□□□□ -0.43
TPM1-220ENST00000559556 SGK494L7N484 410 aa12.34□□□□□ -0.43
TPM1-220ENST00000559556 WISP2O76076 250 aa12.34□□□□□ -0.43
TPM1-220ENST00000559556 COX6B1P14854 86 aa12.34□□□□□ -0.43
TPM1-220ENST00000559556 MAGEA3P43357 314 aa12.34□□□□□ -0.43
TPM1-220ENST00000559556 VPS41P49754 854 aa12.34□□□□□ -0.43
TPM1-220ENST00000559556 CASP6P55212 293 aa12.34□□□□□ -0.43
TPM1-220ENST00000559556 CSNK1G2P78368 415 aa12.34□□□□□ -0.43
TPM1-220ENST00000559556 GPS1Q13098 491 aa12.34□□□□□ -0.43
TPM1-220ENST00000559556 THOC5Q13769 683 aaKnown RBP12.34□□□□□ -0.43
TPM1-220ENST00000559556 TRIP13Q15645 432 aaPredicted RBP12.34□□□□□ -0.43
TPM1-220ENST00000559556 EXT1Q16394 746 aa12.34□□□□□ -0.43
TPM1-220ENST00000559556 C3AR1Q16581 482 aa12.34□□□□□ -0.43
TPM1-220ENST00000559556 MEP1AQ16819 746 aa12.34□□□□□ -0.43
TPM1-220ENST00000559556 KCTD19Q17RG1 926 aaPredicted RBP12.34□□□□□ -0.43
TPM1-220ENST00000559556 FCRLBQ6BAA4 426 aa12.34□□□□□ -0.43
TPM1-220ENST00000559556 ZNF662Q6ZS27 426 aa12.34□□□□□ -0.43
TPM1-220ENST00000559556 PIWIL4Q7Z3Z4 852 aaKnown RBP12.34□□□□□ -0.43
TPM1-220ENST00000559556 PDSS2Q86YH6 399 aa12.34□□□□□ -0.43
TPM1-220ENST00000559556 LMNTD2Q8IXW0 634 aa12.34□□□□□ -0.43
TPM1-220ENST00000559556 CPNE9Q8IYJ1 553 aa12.34□□□□□ -0.43
TPM1-220ENST00000559556 CAMKVQ8NCB2 501 aa12.34□□□□□ -0.43
TPM1-220ENST00000559556 M1APQ8TC57 530 aa12.34□□□□□ -0.43
TPM1-220ENST00000559556 LURAP1Q96LR2 239 aa12.34□□□□□ -0.43
TPM1-220ENST00000559556 GPR137Q96N19 417 aa12.34□□□□□ -0.43
TPM1-220ENST00000559556 FRMD6Q96NE9 622 aa12.34□□□□□ -0.43
TPM1-220ENST00000559556 FAM129AQ9BZQ8 928 aa12.34□□□□□ -0.43
TPM1-220ENST00000559556 KCNK13Q9HB14 408 aa12.34□□□□□ -0.43
TPM1-220ENST00000559556 ANKHQ9HCJ1 492 aa12.34□□□□□ -0.43
TPM1-220ENST00000559556 XAB2Q9HCS7 855 aaKnown RBP12.34□□□□□ -0.43
TPM1-220ENST00000559556 MMP25Q9NPA2 562 aa12.34□□□□□ -0.43
TPM1-220ENST00000559556 TINAGQ9UJW2 476 aa12.34□□□□□ -0.43
TPM1-220ENST00000559556 VPS13CQ709C8 3753 aa12.33□□□□□ -0.43
TPM1-220ENST00000559556 PRRC2AP48634 2157 aaKnown RBP12.33□□□□□ -0.44
TPM1-220ENST00000559556 OR2W5A6NFC9 320 aa12.33□□□□□ -0.44
TPM1-220ENST00000559556 SDR42E2A6NKP2 422 aa12.33□□□□□ -0.44
TPM1-220ENST00000559556 TTI1O43156 1089 aa12.33□□□□□ -0.44
TPM1-220ENST00000559556 RDH16O75452 317 aa12.33□□□□□ -0.44
TPM1-220ENST00000559556 MLYCDO95822 493 aa12.33□□□□□ -0.44
TPM1-220ENST00000559556 COILP38432 576 aaPredicted RBP12.33□□□□□ -0.44
TPM1-220ENST00000559556 TERF1P54274 439 aa12.33□□□□□ -0.44
TPM1-220ENST00000559556 RHAGQ02094 409 aa12.33□□□□□ -0.44
TPM1-220ENST00000559556 ABRAXAS2Q15018 415 aa12.33□□□□□ -0.44
TPM1-220ENST00000559556 OR1C1Q15619 314 aa12.33□□□□□ -0.44
TPM1-220ENST00000559556 KRTCAP3Q53RY4 240 aa12.33□□□□□ -0.44
TPM1-220ENST00000559556 LRRC8EQ6NSJ5 796 aa12.33□□□□□ -0.44
TPM1-220ENST00000559556 PAPD4Q6PIY7 484 aaKnown RBP12.33□□□□□ -0.44
TPM1-220ENST00000559556 C17orf64Q86WR6 236 aa12.33□□□□□ -0.44
TPM1-220ENST00000559556 LGI4Q8N135 537 aa12.33□□□□□ -0.44
TPM1-220ENST00000559556 TMEM178AQ8NBL3 297 aa12.33□□□□□ -0.44
TPM1-220ENST00000559556 KCT2Q8NC54 265 aa12.33□□□□□ -0.44
TPM1-220ENST00000559556 MCUQ8NE86 351 aa12.33□□□□□ -0.44
TPM1-220ENST00000559556 ZCCHC10Q8TBK6 192 aa12.33□□□□□ -0.44
TPM1-220ENST00000559556 CALML6Q8TD86 181 aa12.33□□□□□ -0.44
TPM1-220ENST00000559556 MAGED4Q96JG8 741 aa12.33□□□□□ -0.44
TPM1-220ENST00000559556 SERPINB12Q96P63 405 aa12.33□□□□□ -0.44
TPM1-220ENST00000559556 OR1F2PQ96R84 312 aa12.33□□□□□ -0.44
TPM1-220ENST00000559556 MACROD1Q9BQ69 325 aa12.33□□□□□ -0.44
TPM1-220ENST00000559556 UTP23Q9BRU9 249 aaKnown RBP12.33□□□□□ -0.44
TPM1-220ENST00000559556 AARSD1Q9BTE6 412 aaKnown RBP12.33□□□□□ -0.44
TPM1-220ENST00000559556 HES7Q9BYE0 225 aa12.33□□□□□ -0.44
TPM1-220ENST00000559556 LANCL2Q9NS86 450 aa12.33□□□□□ -0.44
TPM1-220ENST00000559556 SLC22A7Q9Y694 548 aa12.33□□□□□ -0.44
TPM1-220ENST00000559556 DOCK7Q96N67 2140 aa12.32□□□□□ -0.44
TPM1-220ENST00000559556 FEZF1A0PJY2 475 aa12.32□□□□□ -0.44
TPM1-220ENST00000559556 MAGEB17A8MXT2 336 aa12.32□□□□□ -0.44
TPM1-220ENST00000559556 CDK2AP1O14519 115 aa12.32□□□□□ -0.44
TPM1-220ENST00000559556 SLC35G6P0C7Q6 338 aa12.32□□□□□ -0.44
TPM1-220ENST00000559556 IL10P22301 178 aa12.32□□□□□ -0.44
TPM1-220ENST00000559556 CCND1P24385 295 aa12.32□□□□□ -0.44
TPM1-220ENST00000559556 EEF1DP29692 281 aaKnown RBP12.32□□□□□ -0.44
TPM1-220ENST00000559556 CD96P40200 585 aa12.32□□□□□ -0.44
TPM1-220ENST00000559556 SP140Q13342 867 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms