RNA–Protein interactions for RNA: ENST00000559496.5

ZEB1-216, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,381 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-216ENST00000559496 MAGEB10Q96LZ2 347 aaPredicted RBP6.82□□□□□ -1.32
ZEB1-216ENST00000559496 C19orf43Q9BQ61 176 aa6.82□□□□□ -1.32
ZEB1-216ENST00000559496 OR2B2Q9GZK3 357 aa6.82□□□□□ -1.32
ZEB1-216ENST00000559496 HOXD1Q9GZZ0 328 aa6.82□□□□□ -1.32
ZEB1-216ENST00000559496 MEGF9Q9H1U4 602 aa6.82□□□□□ -1.32
ZEB1-216ENST00000559496 ARMC7Q9H6L4 198 aa6.82□□□□□ -1.32
ZEB1-216ENST00000559496 SIAEQ9HAT2 523 aa6.82□□□□□ -1.32
ZEB1-216ENST00000559496 PCDH12Q9NPG4 1184 aa6.82□□□□□ -1.32
ZEB1-216ENST00000559496 PRSS16Q9NQE7 514 aa6.82□□□□□ -1.32
ZEB1-216ENST00000559496 DYRK4Q9NR20 520 aa6.82□□□□□ -1.32
ZEB1-216ENST00000559496 FBXO6Q9NRD1 293 aaPredicted RBP6.82□□□□□ -1.32
ZEB1-216ENST00000559496 MARCH4Q9P2E8 410 aaPredicted RBP6.82□□□□□ -1.32
ZEB1-216ENST00000559496 B4GALT6Q9UBX8 382 aa6.82□□□□□ -1.32
ZEB1-216ENST00000559496 SARDHQ9UL12 918 aa6.82□□□□□ -1.32
ZEB1-216ENST00000559496 MTO1Q9Y2Z2 717 aaKnown RBP6.82□□□□□ -1.32
ZEB1-216ENST00000559496 MYO10Q9HD67 2058 aa6.81□□□□□ -1.32
ZEB1-216ENST00000559496 OR5K3A6NET4 321 aa6.81□□□□□ -1.32
ZEB1-216ENST00000559496 FAM47DPA6NHR8 397 aa6.81□□□□□ -1.32
ZEB1-216ENST00000559496 TRIM64BA6NI03 449 aa6.81□□□□□ -1.32
ZEB1-216ENST00000559496 H0YJX3 145 aa6.81□□□□□ -1.32
ZEB1-216ENST00000559496 H7C0S8 307 aa6.81□□□□□ -1.32
ZEB1-216ENST00000559496 COPEO14579 308 aa6.81□□□□□ -1.32
ZEB1-216ENST00000559496 TPP1O14773 563 aa6.81□□□□□ -1.32
ZEB1-216ENST00000559496 PRPF4O43172 522 aaKnown RBP eCLIP6.81□□□□□ -1.32
ZEB1-216ENST00000559496 SYNCRIPO60506 623 aaKnown RBP6.81□□□□□ -1.32
ZEB1-216ENST00000559496 NDUFS3O75489 264 aa6.81□□□□□ -1.32
ZEB1-216ENST00000559496 RFPL1O75677 317 aa6.81□□□□□ -1.32
ZEB1-216ENST00000559496 RNASEH2AO75792 299 aaKnown RBP6.81□□□□□ -1.32
ZEB1-216ENST00000559496 BMP10O95393 424 aa6.81□□□□□ -1.32
ZEB1-216ENST00000559496 BAG2O95816 211 aa6.81□□□□□ -1.32
ZEB1-216ENST00000559496 ALDOAP04075 364 aaKnown RBP6.81□□□□□ -1.32
ZEB1-216ENST00000559496 C1SP09871 688 aa6.81□□□□□ -1.32
ZEB1-216ENST00000559496 IL9P15248 144 aa6.81□□□□□ -1.32
ZEB1-216ENST00000559496 ZNF30P17039 623 aa6.81□□□□□ -1.32
ZEB1-216ENST00000559496 BPIP17213 487 aa6.81□□□□□ -1.32
ZEB1-216ENST00000559496 DRD1P21728 446 aa6.81□□□□□ -1.32
ZEB1-216ENST00000559496 LHCGRP22888 699 aa6.81□□□□□ -1.32
ZEB1-216ENST00000559496 GABRB3P28472 473 aa6.81□□□□□ -1.32
ZEB1-216ENST00000559496 TYK2P29597 1187 aa6.81□□□□□ -1.32
ZEB1-216ENST00000559496 NTSR1P30989 418 aa6.81□□□□□ -1.32
ZEB1-216ENST00000559496 FOXN2P32314 431 aa6.81□□□□□ -1.32
ZEB1-216ENST00000559496 SPAM1P38567 509 aa6.81□□□□□ -1.32
ZEB1-216ENST00000559496 LEPRP48357 1165 aaKnown RBP6.81□□□□□ -1.32
ZEB1-216ENST00000559496 CLCN5P51795 746 aa6.81□□□□□ -1.32
ZEB1-216ENST00000559496 METAP1P53582 386 aa6.81□□□□□ -1.32
ZEB1-216ENST00000559496 SLC18A2Q05940 514 aa6.81□□□□□ -1.32
ZEB1-216ENST00000559496 CACNG1Q06432 222 aa6.81□□□□□ -1.32
ZEB1-216ENST00000559496 ILF2Q12905 390 aaKnown RBP6.81□□□□□ -1.32
ZEB1-216ENST00000559496 DLG1Q12959 904 aa6.81□□□□□ -1.32
ZEB1-216ENST00000559496 TOP3AQ13472 1001 aaPredicted RBP6.81□□□□□ -1.32
ZEB1-216ENST00000559496 TDGQ13569 410 aa6.81□□□□□ -1.32
ZEB1-216ENST00000559496 PEX6Q13608 980 aa6.81□□□□□ -1.32
ZEB1-216ENST00000559496 SEMA3AQ14563 771 aa6.81□□□□□ -1.32
ZEB1-216ENST00000559496 STARD3Q14849 445 aa6.81□□□□□ -1.32
ZEB1-216ENST00000559496 PDK4Q16654 411 aa6.81□□□□□ -1.32
ZEB1-216ENST00000559496 TYSND1Q2T9J0 566 aa6.81□□□□□ -1.32
ZEB1-216ENST00000559496 C4orf46Q504U0 113 aa6.81□□□□□ -1.32
ZEB1-216ENST00000559496 C2orf27AQ580R0 203 aa6.81□□□□□ -1.32
ZEB1-216ENST00000559496 AARS2Q5JTZ9 985 aaKnown RBP6.81□□□□□ -1.32
ZEB1-216ENST00000559496 OGFRL1Q5TC84 451 aaPredicted RBP6.81□□□□□ -1.32
ZEB1-216ENST00000559496 FAM46CQ5VWP2 391 aa6.81□□□□□ -1.32
ZEB1-216ENST00000559496 SDE2Q6IQ49 451 aa6.81□□□□□ -1.32
ZEB1-216ENST00000559496 CNSTQ6PJW8 725 aa6.81□□□□□ -1.32
ZEB1-216ENST00000559496 FAM151BQ6UXP7 276 aa6.81□□□□□ -1.32
ZEB1-216ENST00000559496 LINC00299Q6ZSB3 139 aa6.81□□□□□ -1.32
ZEB1-216ENST00000559496 RAPH1Q70E73 1250 aa6.81□□□□□ -1.32
ZEB1-216ENST00000559496 DPPA4Q7L190 304 aa6.81□□□□□ -1.32
ZEB1-216ENST00000559496 CXXC5Q7LFL8 322 aaKnown RBP6.81□□□□□ -1.32
ZEB1-216ENST00000559496 TRMT11Q7Z4G4 463 aaKnown RBP6.81□□□□□ -1.32
ZEB1-216ENST00000559496 LDB1Q86U70 411 aaPredicted RBP6.81□□□□□ -1.32
ZEB1-216ENST00000559496 SLC41A1Q8IVJ1 513 aa6.81□□□□□ -1.32
ZEB1-216ENST00000559496 ARL6IP6Q8N6S5 226 aa6.81□□□□□ -1.32
ZEB1-216ENST00000559496 BANPQ8N9N5 519 aa6.81□□□□□ -1.32
ZEB1-216ENST00000559496 OR10Z1Q8NGY1 313 aa6.81□□□□□ -1.32
ZEB1-216ENST00000559496 GRPEL2Q8TAA5 225 aa6.81□□□□□ -1.32
ZEB1-216ENST00000559496 MGARPQ8TDB4 240 aa6.81□□□□□ -1.32
ZEB1-216ENST00000559496 ARRDC3Q96B67 414 aa6.81□□□□□ -1.32
ZEB1-216ENST00000559496 EID2BQ96D98 161 aa6.81□□□□□ -1.32
ZEB1-216ENST00000559496 MSANTD3Q96H12 275 aa6.81□□□□□ -1.32
ZEB1-216ENST00000559496 REXO5Q96IC2 774 aaKnown RBP6.81□□□□□ -1.32
ZEB1-216ENST00000559496 APOPT1Q96IL0 206 aa6.81□□□□□ -1.32
ZEB1-216ENST00000559496 ELMO2Q96JJ3 720 aa6.81□□□□□ -1.32
ZEB1-216ENST00000559496 GPR22Q99680 433 aa6.81□□□□□ -1.32
ZEB1-216ENST00000559496 C1orf21Q9H246 121 aa6.81□□□□□ -1.32
ZEB1-216ENST00000559496 FAM96AQ9H5X1 160 aa6.81□□□□□ -1.32
ZEB1-216ENST00000559496 RMND5AQ9H871 391 aa6.81□□□□□ -1.32
ZEB1-216ENST00000559496 NEK6Q9HC98 313 aa6.81□□□□□ -1.32
ZEB1-216ENST00000559496 SYTL2Q9HCH5 934 aa6.81□□□□□ -1.32
ZEB1-216ENST00000559496 SLC2A4RGQ9NR83 387 aa6.81□□□□□ -1.32
ZEB1-216ENST00000559496 SNX15Q9NRS6 342 aa6.81□□□□□ -1.32
ZEB1-216ENST00000559496 TAS2R1Q9NYW7 299 aa6.81□□□□□ -1.32
ZEB1-216ENST00000559496 PKD2L2Q9NZM6 624 aa6.81□□□□□ -1.32
ZEB1-216ENST00000559496 APPL1Q9UKG1 709 aa6.81□□□□□ -1.32
ZEB1-216ENST00000559496 SLC39A10Q9ULF5 831 aa6.81□□□□□ -1.32
ZEB1-216ENST00000559496 PCDHGA3Q9Y5H0 932 aa6.81□□□□□ -1.32
ZEB1-216ENST00000559496 ATG2BQ96BY7 2078 aa6.8□□□□□ -1.32
ZEB1-216ENST00000559496 CKAP5Q14008 2032 aa6.8□□□□□ -1.32
ZEB1-216ENST00000559496 SCN8AQ9UQD0 1980 aa6.8□□□□□ -1.32
ZEB1-216ENST00000559496 ZNF106Q9H2Y7 1883 aaKnown RBP6.8□□□□□ -1.32
ZEB1-216ENST00000559496 GLYATL1P3A0A0U1RQE8 302 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms