RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 MGAQ8IWI9 3026 aa19.32■□□□□ 0.68
TSPAN3-207ENST00000559494 COPEO14579 308 aa19.31■□□□□ 0.68
TSPAN3-207ENST00000559494 ONECUT2O95948 504 aa19.31■□□□□ 0.68
TSPAN3-207ENST00000559494 PROCP04070 461 aa19.31■□□□□ 0.68
TSPAN3-207ENST00000559494 ATXN8OSP0DMR3 200 aa19.31■□□□□ 0.68
TSPAN3-207ENST00000559494 TAC1P20366 129 aa19.31■□□□□ 0.68
TSPAN3-207ENST00000559494 CXCR2P25025 360 aa19.31■□□□□ 0.68
TSPAN3-207ENST00000559494 AHRP35869 848 aa19.31■□□□□ 0.68
TSPAN3-207ENST00000559494 NKAIN1Q4KMZ8 207 aa19.31■□□□□ 0.68
TSPAN3-207ENST00000559494 FAM198BQ6UWH4 519 aa19.31■□□□□ 0.68
TSPAN3-207ENST00000559494 TMIGD1Q6UXZ0 262 aa19.31■□□□□ 0.68
TSPAN3-207ENST00000559494 CCDC81Q6ZN84 652 aa19.31■□□□□ 0.68
TSPAN3-207ENST00000559494 GOLGA7Q7Z5G4 137 aa19.31■□□□□ 0.68
TSPAN3-207ENST00000559494 METTL27Q8N6F8 245 aaPredicted RBP19.31■□□□□ 0.68
TSPAN3-207ENST00000559494 KCT2Q8NC54 265 aa19.31■□□□□ 0.68
TSPAN3-207ENST00000559494 SLC45A3Q96JT2 553 aa19.31■□□□□ 0.68
TSPAN3-207ENST00000559494 NSUN5Q96P11 429 aaKnown RBP19.31■□□□□ 0.68
TSPAN3-207ENST00000559494 FARSAQ9Y285 508 aaKnown RBP19.31■□□□□ 0.68
TSPAN3-207ENST00000559494 C21orf140B9A014 251 aa19.3■□□□□ 0.68
TSPAN3-207ENST00000559494 FOXS1O43638 330 aa19.3■□□□□ 0.68
TSPAN3-207ENST00000559494 PLIN3O60664 434 aa19.3■□□□□ 0.68
TSPAN3-207ENST00000559494 KATNA1O75449 491 aa19.3■□□□□ 0.68
TSPAN3-207ENST00000559494 ATP5F1P24539 256 aaPredicted RBP19.3■□□□□ 0.68
TSPAN3-207ENST00000559494 OR1D4P47884 311 aa19.3■□□□□ 0.68
TSPAN3-207ENST00000559494 UCNP55089 124 aa19.3■□□□□ 0.68
TSPAN3-207ENST00000559494 NFKB2Q00653 900 aa19.3■□□□□ 0.68
TSPAN3-207ENST00000559494 SLC9A5Q14940 896 aa19.3■□□□□ 0.68
TSPAN3-207ENST00000559494 CEP85LQ5SZL2 805 aa19.3■□□□□ 0.68
TSPAN3-207ENST00000559494 RPS27LQ71UM5 84 aaKnown RBP19.3■□□□□ 0.68
TSPAN3-207ENST00000559494 SRRM1Q8IYB3 904 aaKnown RBP19.3■□□□□ 0.68
TSPAN3-207ENST00000559494 KRT78Q8N1N4 520 aa19.3■□□□□ 0.68
TSPAN3-207ENST00000559494 BANPQ8N9N5 519 aa19.3■□□□□ 0.68
TSPAN3-207ENST00000559494 CREB3L4Q8TEY5 395 aa19.3■□□□□ 0.68
TSPAN3-207ENST00000559494 EFHD1Q9BUP0 239 aa19.3■□□□□ 0.68
TSPAN3-207ENST00000559494 EFCAB11Q9BUY7 163 aa19.3■□□□□ 0.68
TSPAN3-207ENST00000559494 GPR87Q9BY21 358 aa19.3■□□□□ 0.68
TSPAN3-207ENST00000559494 NLNQ9BYT8 704 aa19.3■□□□□ 0.68
TSPAN3-207ENST00000559494 IPPKQ9H8X2 491 aa19.3■□□□□ 0.68
TSPAN3-207ENST00000559494 ZBTB26Q9HCK0 441 aa19.3■□□□□ 0.68
TSPAN3-207ENST00000559494 PCTPQ9UKL6 214 aa19.3■□□□□ 0.68
TSPAN3-207ENST00000559494 PCDHGA6Q9Y5G7 932 aa19.3■□□□□ 0.68
TSPAN3-207ENST00000559494 MAU2Q9Y6X3 613 aa19.3■□□□□ 0.68
TSPAN3-207ENST00000559494 LOC400499M0QZD8 3231 aa19.3■□□□□ 0.68
TSPAN3-207ENST00000559494 G3V2L1 256 aa19.29■□□□□ 0.68
TSPAN3-207ENST00000559494 K7ENP7 123 aa19.29■□□□□ 0.68
TSPAN3-207ENST00000559494 SERPIND1P05546 499 aa19.29■□□□□ 0.68
TSPAN3-207ENST00000559494 RAB40ALP0C0E4 278 aa19.29■□□□□ 0.68
TSPAN3-207ENST00000559494 CREB1P16220 341 aa19.29■□□□□ 0.68
TSPAN3-207ENST00000559494 TMPRSS3P57727 454 aa19.29■□□□□ 0.68
TSPAN3-207ENST00000559494 CYP4F2P78329 520 aa19.29■□□□□ 0.68
TSPAN3-207ENST00000559494 VAC14Q08AM6 782 aa19.29■□□□□ 0.68
TSPAN3-207ENST00000559494 LAPTM5Q13571 262 aa19.29■□□□□ 0.68
TSPAN3-207ENST00000559494 PWP1Q13610 501 aa19.29■□□□□ 0.68
TSPAN3-207ENST00000559494 FAM53BQ14153 422 aa19.29■□□□□ 0.68
TSPAN3-207ENST00000559494 COL28A1Q2UY09 1125 aa19.29■□□□□ 0.68
TSPAN3-207ENST00000559494 MLIPQ5VWP3 458 aa19.29■□□□□ 0.68
TSPAN3-207ENST00000559494 TMEM214Q6NUQ4 689 aaKnown RBP19.29■□□□□ 0.68
TSPAN3-207ENST00000559494 INO80CQ6PI98 192 aaPredicted RBP19.29■□□□□ 0.68
TSPAN3-207ENST00000559494 LRIG3Q6UXM1 1119 aa19.29■□□□□ 0.68
TSPAN3-207ENST00000559494 COX15Q7KZN9 410 aa19.29■□□□□ 0.68
TSPAN3-207ENST00000559494 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP19.29■□□□□ 0.68
TSPAN3-207ENST00000559494 TRPV3Q8NET8 790 aa19.29■□□□□ 0.68
TSPAN3-207ENST00000559494 NT5CQ8TCD5 201 aa19.29■□□□□ 0.68
TSPAN3-207ENST00000559494 C1QTNF3Q9BXJ4 246 aa19.29■□□□□ 0.68
TSPAN3-207ENST00000559494 PITHD1Q9GZP4 211 aaPredicted RBP19.29■□□□□ 0.68
TSPAN3-207ENST00000559494 NOL11Q9H8H0 719 aaKnown RBP19.29■□□□□ 0.68
TSPAN3-207ENST00000559494 ACSS2Q9NR19 701 aa19.29■□□□□ 0.68
TSPAN3-207ENST00000559494 MKS1Q9NXB0 559 aa19.29■□□□□ 0.68
TSPAN3-207ENST00000559494 KCND3Q9UK17 655 aa19.29■□□□□ 0.68
TSPAN3-207ENST00000559494 OR7A17O14581 309 aa19.28■□□□□ 0.68
TSPAN3-207ENST00000559494 RGS16O15492 202 aaPredicted RBP19.28■□□□□ 0.68
TSPAN3-207ENST00000559494 NDUFS4O43181 175 aa19.28■□□□□ 0.68
TSPAN3-207ENST00000559494 CNOT3O75175 753 aaKnown RBP19.28■□□□□ 0.68
TSPAN3-207ENST00000559494 RPS17P08708 135 aaKnown RBP19.28■□□□□ 0.68
TSPAN3-207ENST00000559494 SLC35G6P0C7Q6 338 aa19.28■□□□□ 0.68
TSPAN3-207ENST00000559494 PTPN4P29074 926 aa19.28■□□□□ 0.68
TSPAN3-207ENST00000559494 PRKAA2P54646 552 aa19.28■□□□□ 0.68
TSPAN3-207ENST00000559494 RPS18P62269 152 aaKnown RBP19.28■□□□□ 0.68
TSPAN3-207ENST00000559494 RPS15P62841 145 aaKnown RBP19.28■□□□□ 0.68
TSPAN3-207ENST00000559494 HYAL2Q12891 473 aa19.28■□□□□ 0.68
TSPAN3-207ENST00000559494 NDUFA9Q16795 377 aa19.28■□□□□ 0.68
TSPAN3-207ENST00000559494 CCDC153Q494R4 210 aa19.28■□□□□ 0.68
TSPAN3-207ENST00000559494 UNC50Q53HI1 259 aa19.28■□□□□ 0.68
TSPAN3-207ENST00000559494 ARHGAP40Q5TG30 622 aa19.28■□□□□ 0.68
TSPAN3-207ENST00000559494 MRPL14Q6P1L8 145 aaKnown RBP19.28■□□□□ 0.68
TSPAN3-207ENST00000559494 PRMT9Q6P2P2 845 aa19.28■□□□□ 0.68
TSPAN3-207ENST00000559494 OVCH1Q7RTY7 1134 aa19.28■□□□□ 0.68
TSPAN3-207ENST00000559494 PRSS41Q7RTY9 318 aa19.28■□□□□ 0.68
TSPAN3-207ENST00000559494 VN1R5Q7Z5H4 357 aa19.28■□□□□ 0.68
TSPAN3-207ENST00000559494 ENDOVQ8N8Q3 282 aaKnown RBP19.28■□□□□ 0.68
TSPAN3-207ENST00000559494 ZNF483Q8TF39 744 aaPredicted RBP19.28■□□□□ 0.68
TSPAN3-207ENST00000559494 AICDAQ9GZX7 198 aa19.28■□□□□ 0.68
TSPAN3-207ENST00000559494 PRORYQ9H606 182 aa19.28■□□□□ 0.68
TSPAN3-207ENST00000559494 ZNF304Q9HCX3 659 aa19.28■□□□□ 0.68
TSPAN3-207ENST00000559494 IFT80Q9P2H3 777 aaPredicted RBP19.28■□□□□ 0.68
TSPAN3-207ENST00000559494 PLLPQ9Y342 182 aa19.28■□□□□ 0.68
TSPAN3-207ENST00000559494 KMT2BQ9UMN6 2715 aaPredicted RBP19.28■□□□□ 0.68
TSPAN3-207ENST00000559494 A0A0A6YYC8 382 aaPredicted RBP19.27■□□□□ 0.68
TSPAN3-207ENST00000559494 C9J4A7 227 aa19.27■□□□□ 0.68
TSPAN3-207ENST00000559494 I3L1I5 382 aaPredicted RBP19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms