RNA–Protein interactions for RNA: ENST00000559433.5

LRRC28-214, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-214ENST00000559433 EMP2P54851 167 aa11.94□□□□□ -0.5
LRRC28-214ENST00000559433 SNRPNP63162 240 aaKnown RBP11.94□□□□□ -0.5
LRRC28-214ENST00000559433 MAT1AQ00266 395 aaKnown RBP11.94□□□□□ -0.5
LRRC28-214ENST00000559433 NAB1Q13506 487 aa11.94□□□□□ -0.5
LRRC28-214ENST00000559433 CSHL1Q14406 222 aa11.94□□□□□ -0.5
LRRC28-214ENST00000559433 SLMAPQ14BN4 828 aa11.94□□□□□ -0.5
LRRC28-214ENST00000559433 CATSPEREQ5SY80 951 aa11.94□□□□□ -0.5
LRRC28-214ENST00000559433 GRTP1Q5TC63 336 aa11.94□□□□□ -0.5
LRRC28-214ENST00000559433 TMEM214Q6NUQ4 689 aaKnown RBP11.94□□□□□ -0.5
LRRC28-214ENST00000559433 JMJD6Q6NYC1 403 aaPredicted RBP11.94□□□□□ -0.5
LRRC28-214ENST00000559433 SPATA6LQ8N4H0 392 aa11.94□□□□□ -0.5
LRRC28-214ENST00000559433 KCT2Q8NC54 265 aa11.94□□□□□ -0.5
LRRC28-214ENST00000559433 MNS1Q8NEH6 495 aa11.94□□□□□ -0.5
LRRC28-214ENST00000559433 OR11G2Q8NGC1 345 aa11.94□□□□□ -0.5
LRRC28-214ENST00000559433 OR4K1Q8NGD4 311 aa11.94□□□□□ -0.5
LRRC28-214ENST00000559433 C8orf44Q96CB5 159 aa11.94□□□□□ -0.5
LRRC28-214ENST00000559433 TM4SF19Q96DZ7 209 aa11.94□□□□□ -0.5
LRRC28-214ENST00000559433 MESP1Q9BRJ9 268 aa11.94□□□□□ -0.5
LRRC28-214ENST00000559433 PELI2Q9HAT8 420 aa11.94□□□□□ -0.5
LRRC28-214ENST00000559433 ANKHQ9HCJ1 492 aa11.94□□□□□ -0.5
LRRC28-214ENST00000559433 ZDHHC18Q9NUE0 388 aa11.94□□□□□ -0.5
LRRC28-214ENST00000559433 SLC22A14Q9Y267 594 aa11.94□□□□□ -0.5
LRRC28-214ENST00000559433 SETXQ7Z333 2677 aaKnown RBP11.94□□□□□ -0.5
LRRC28-214ENST00000559433 NBASA2RRP1 2371 aa11.93□□□□□ -0.5
LRRC28-214ENST00000559433 ASH1LQ9NR48 2969 aaKnown RBP11.93□□□□□ -0.5
LRRC28-214ENST00000559433 IDSB3KWA1 339 aa11.93□□□□□ -0.5
LRRC28-214ENST00000559433 H0YIG0 161 aa11.93□□□□□ -0.5
LRRC28-214ENST00000559433 SGK494L7N484 410 aa11.93□□□□□ -0.5
LRRC28-214ENST00000559433 NDUFS4O43181 175 aa11.93□□□□□ -0.5
LRRC28-214ENST00000559433 WDR47O94967 919 aa11.93□□□□□ -0.5
LRRC28-214ENST00000559433 NSA2O95478 260 aaKnown RBP11.93□□□□□ -0.5
LRRC28-214ENST00000559433 HPP00738 406 aa11.93□□□□□ -0.5
LRRC28-214ENST00000559433 SERPIND1P05546 499 aa11.93□□□□□ -0.5
LRRC28-214ENST00000559433 SOX8P57073 446 aa11.93□□□□□ -0.5
LRRC28-214ENST00000559433 RAB10P61026 200 aa11.93□□□□□ -0.5
LRRC28-214ENST00000559433 REEP5Q00765 189 aa11.93□□□□□ -0.5
LRRC28-214ENST00000559433 EFTUD2Q15029 972 aaKnown RBP eCLIP11.93□□□□□ -0.5
LRRC28-214ENST00000559433 ZKSCAN8Q15776 578 aaPredicted RBP11.93□□□□□ -0.5
LRRC28-214ENST00000559433 C18orf21Q32NC0 220 aaPredicted RBP11.93□□□□□ -0.5
LRRC28-214ENST00000559433 MFSD4BQ5TF39 518 aa11.93□□□□□ -0.5
LRRC28-214ENST00000559433 AGAP7PQ5VUJ5 663 aa11.93□□□□□ -0.5
LRRC28-214ENST00000559433 FAAH2Q6GMR7 532 aa11.93□□□□□ -0.5
LRRC28-214ENST00000559433 RAPH1Q70E73 1250 aa11.93□□□□□ -0.5
LRRC28-214ENST00000559433 TMPRSS11BQ86T26 416 aa11.93□□□□□ -0.5
LRRC28-214ENST00000559433 ZC3H7AQ8IWR0 971 aaKnown RBP11.93□□□□□ -0.5
LRRC28-214ENST00000559433 PARP9Q8IXQ6 854 aa11.93□□□□□ -0.5
LRRC28-214ENST00000559433 MMGT1Q8N4V1 131 aa11.93□□□□□ -0.5
LRRC28-214ENST00000559433 ZNF740Q8NDX6 193 aa11.93□□□□□ -0.5
LRRC28-214ENST00000559433 PNPLA2Q96AD5 504 aa11.93□□□□□ -0.5
LRRC28-214ENST00000559433 AGAP4Q96P64 663 aa11.93□□□□□ -0.5
LRRC28-214ENST00000559433 TGIF2Q9GZN2 237 aa11.93□□□□□ -0.5
LRRC28-214ENST00000559433 ILKAPQ9H0C8 392 aaPredicted RBP11.93□□□□□ -0.5
LRRC28-214ENST00000559433 SPNS1Q9H2V7 528 aa11.93□□□□□ -0.5
LRRC28-214ENST00000559433 ZNF552Q9H707 407 aaPredicted RBP11.93□□□□□ -0.5
LRRC28-214ENST00000559433 ZNF160Q9HCG1 818 aa11.93□□□□□ -0.5
LRRC28-214ENST00000559433 LUZP4Q9P127 313 aa11.93□□□□□ -0.5
LRRC28-214ENST00000559433 HCN3Q9P1Z3 774 aa11.93□□□□□ -0.5
LRRC28-214ENST00000559433 MKL2Q9ULH7 1088 aa11.93□□□□□ -0.5
LRRC28-214ENST00000559433 KCNE2Q9Y6J6 123 aa11.93□□□□□ -0.5
LRRC28-214ENST00000559433 SCN2AQ99250 2005 aa11.93□□□□□ -0.5
LRRC28-214ENST00000559433 CTAGE15A4D2H0 777 aa11.92□□□□□ -0.5
LRRC28-214ENST00000559433 KIF2AO00139 706 aaPredicted RBP11.92□□□□□ -0.5
LRRC28-214ENST00000559433 RDH16O75452 317 aa11.92□□□□□ -0.5
LRRC28-214ENST00000559433 TUBB4AP04350 444 aa11.92□□□□□ -0.5
LRRC28-214ENST00000559433 CTAGE8P0CG41 777 aa11.92□□□□□ -0.5
LRRC28-214ENST00000559433 CD1DP15813 335 aa11.92□□□□□ -0.5
LRRC28-214ENST00000559433 CD97P48960 835 aa11.92□□□□□ -0.5
LRRC28-214ENST00000559433 ATP6V0D1P61421 351 aa11.92□□□□□ -0.5
LRRC28-214ENST00000559433 EEF1A2Q05639 463 aaKnown RBP11.92□□□□□ -0.5
LRRC28-214ENST00000559433 RGS1Q08116 209 aa11.92□□□□□ -0.5
LRRC28-214ENST00000559433 PWP1Q13610 501 aa11.92□□□□□ -0.5
LRRC28-214ENST00000559433 TGFBIQ15582 683 aa11.92□□□□□ -0.5
LRRC28-214ENST00000559433 OR4D1Q15615 310 aa11.92□□□□□ -0.5
LRRC28-214ENST00000559433 MINDY4Q4G0A6 757 aa11.92□□□□□ -0.5
LRRC28-214ENST00000559433 ATG9BQ674R7 924 aa11.92□□□□□ -0.5
LRRC28-214ENST00000559433 SLC6A19Q695T7 634 aa11.92□□□□□ -0.5
LRRC28-214ENST00000559433 NXPE4Q6UWF7 544 aa11.92□□□□□ -0.5
LRRC28-214ENST00000559433 CMC1Q7Z7K0 106 aa11.92□□□□□ -0.5
LRRC28-214ENST00000559433 CTAGE6Q86UF2 777 aa11.92□□□□□ -0.5
LRRC28-214ENST00000559433 PDSS2Q86YH6 399 aa11.92□□□□□ -0.5
LRRC28-214ENST00000559433 GPSM1Q86YR5 675 aa11.92□□□□□ -0.5
LRRC28-214ENST00000559433 CTAGE4Q8IX94 777 aa11.92□□□□□ -0.5
LRRC28-214ENST00000559433 TCAIMQ8N3R3 496 aa11.92□□□□□ -0.5
LRRC28-214ENST00000559433 RBMXL3Q8N7X1 1067 aaKnown RBP11.92□□□□□ -0.5
LRRC28-214ENST00000559433 NOA1Q8NC60 698 aaKnown RBP11.92□□□□□ -0.5
LRRC28-214ENST00000559433 METTL21AQ8WXB1 218 aa11.92□□□□□ -0.5
LRRC28-214ENST00000559433 EXT2Q93063 718 aa11.92□□□□□ -0.5
LRRC28-214ENST00000559433 MIB2Q96AX9 1013 aa11.92□□□□□ -0.5
LRRC28-214ENST00000559433 RHBDF1Q96CC6 855 aa11.92□□□□□ -0.5
LRRC28-214ENST00000559433 MOCOSQ96EN8 888 aa11.92□□□□□ -0.5
LRRC28-214ENST00000559433 THOC3Q96J01 351 aaKnown RBP11.92□□□□□ -0.5
LRRC28-214ENST00000559433 AIF1LQ9BQI0 150 aa11.92□□□□□ -0.5
LRRC28-214ENST00000559433 SARGQ9BW04 601 aa11.92□□□□□ -0.5
LRRC28-214ENST00000559433 SLC29A3Q9BZD2 475 aa11.92□□□□□ -0.5
LRRC28-214ENST00000559433 LHPPQ9H008 270 aa11.92□□□□□ -0.5
LRRC28-214ENST00000559433 OCEL1Q9H607 264 aa11.92□□□□□ -0.5
LRRC28-214ENST00000559433 WWOXQ9NZC7 414 aa11.92□□□□□ -0.5
LRRC28-214ENST00000559433 MTRF1LQ9UGC7 380 aaKnown RBP11.92□□□□□ -0.5
LRRC28-214ENST00000559433 ZFP69BQ9UJL9 534 aa11.92□□□□□ -0.5
LRRC28-214ENST00000559433 B3GNT3Q9Y2A9 372 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms