RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 UGT3A1Q6NUS8 523 aa12.79□□□□□ -0.36
VPS18-203ENST00000558855 RPUSD3Q6P087 351 aaKnown RBP12.79□□□□□ -0.36
VPS18-203ENST00000558855 LCTLQ6UWM7 567 aa12.79□□□□□ -0.36
VPS18-203ENST00000558855 ANKRD37Q7Z713 158 aa12.79□□□□□ -0.36
VPS18-203ENST00000558855 C17orf64Q86WR6 236 aa12.79□□□□□ -0.36
VPS18-203ENST00000558855 OR51Q1Q8NH59 317 aa12.79□□□□□ -0.36
VPS18-203ENST00000558855 SLCO2A1Q92959 643 aa12.79□□□□□ -0.36
VPS18-203ENST00000558855 CFAP36Q96G28 342 aa12.79□□□□□ -0.36
VPS18-203ENST00000558855 CAPZA3Q96KX2 299 aa12.79□□□□□ -0.36
VPS18-203ENST00000558855 CYTH2Q99418 400 aa12.79□□□□□ -0.36
VPS18-203ENST00000558855 PARVBQ9HBI1 364 aa12.79□□□□□ -0.36
VPS18-203ENST00000558855 AGPAT4Q9NRZ5 378 aa12.79□□□□□ -0.36
VPS18-203ENST00000558855 RIC8BQ9NVN3 520 aa12.79□□□□□ -0.36
VPS18-203ENST00000558855 TAS2R13Q9NYV9 303 aa12.79□□□□□ -0.36
VPS18-203ENST00000558855 NAALAD2Q9Y3Q0 740 aa12.79□□□□□ -0.36
VPS18-203ENST00000558855 MYO7BQ6PIF6 2116 aa12.79□□□□□ -0.36
VPS18-203ENST00000558855 NCOA6Q14686 2063 aaPredicted RBP12.78□□□□□ -0.36
VPS18-203ENST00000558855 H0YIG0 161 aa12.78□□□□□ -0.36
VPS18-203ENST00000558855 CDC123O75794 336 aaPredicted RBP12.78□□□□□ -0.36
VPS18-203ENST00000558855 C8GP07360 202 aa12.78□□□□□ -0.36
VPS18-203ENST00000558855 CXCR2P25025 360 aa12.78□□□□□ -0.36
VPS18-203ENST00000558855 MRPS25P82663 173 aaKnown RBP12.78□□□□□ -0.36
VPS18-203ENST00000558855 SP140Q13342 867 aa12.78□□□□□ -0.36
VPS18-203ENST00000558855 ELOAQ14241 798 aaKnown RBP12.78□□□□□ -0.36
VPS18-203ENST00000558855 PPP1R3AQ16821 1122 aa12.78□□□□□ -0.36
VPS18-203ENST00000558855 C18orf21Q32NC0 220 aaPredicted RBP12.78□□□□□ -0.36
VPS18-203ENST00000558855 MINDY4Q4G0A6 757 aa12.78□□□□□ -0.36
VPS18-203ENST00000558855 MFSD4BQ5TF39 518 aa12.78□□□□□ -0.36
VPS18-203ENST00000558855 STEAP4Q687X5 459 aa12.78□□□□□ -0.36
VPS18-203ENST00000558855 SBSNQ6UWP8 590 aa12.78□□□□□ -0.36
VPS18-203ENST00000558855 CPEB2Q7Z5Q1 589 aaKnown RBP12.78□□□□□ -0.36
VPS18-203ENST00000558855 ASPGQ86U10 573 aa12.78□□□□□ -0.36
VPS18-203ENST00000558855 CREG2Q8IUH2 290 aa12.78□□□□□ -0.36
VPS18-203ENST00000558855 ANKMY2Q8IV38 441 aa12.78□□□□□ -0.36
VPS18-203ENST00000558855 KLHL7Q8IXQ5 586 aa12.78□□□□□ -0.36
VPS18-203ENST00000558855 MYO1HQ8N1T3 1032 aa12.78□□□□□ -0.36
VPS18-203ENST00000558855 GPATCH11Q8N954 259 aa12.78□□□□□ -0.36
VPS18-203ENST00000558855 MFSD9Q8NBP5 474 aa12.78□□□□□ -0.36
VPS18-203ENST00000558855 OR56A3Q8NH54 315 aa12.78□□□□□ -0.36
VPS18-203ENST00000558855 MCOLN3Q8TDD5 553 aa12.78□□□□□ -0.36
VPS18-203ENST00000558855 GRK7Q8WTQ7 553 aa12.78□□□□□ -0.36
VPS18-203ENST00000558855 HAS2Q92819 552 aa12.78□□□□□ -0.36
VPS18-203ENST00000558855 PEX11GQ96HA9 241 aa12.78□□□□□ -0.36
VPS18-203ENST00000558855 MAGEB10Q96LZ2 347 aaPredicted RBP12.78□□□□□ -0.36
VPS18-203ENST00000558855 OLAHQ9NV23 265 aa12.78□□□□□ -0.36
VPS18-203ENST00000558855 TEX264Q9Y6I9 313 aa12.78□□□□□ -0.36
VPS18-203ENST00000558855 AKAP9Q99996 3911 aa12.78□□□□□ -0.36
VPS18-203ENST00000558855 CDC7O00311 574 aa12.77□□□□□ -0.37
VPS18-203ENST00000558855 CES2O00748 559 aa12.77□□□□□ -0.37
VPS18-203ENST00000558855 PCDH17O14917 1159 aa12.77□□□□□ -0.37
VPS18-203ENST00000558855 ZNHIT1O43257 154 aa12.77□□□□□ -0.37
VPS18-203ENST00000558855 GUCA1CO95843 209 aa12.77□□□□□ -0.37
VPS18-203ENST00000558855 STSP08842 583 aa12.77□□□□□ -0.37
VPS18-203ENST00000558855 GMPRP36959 345 aa12.77□□□□□ -0.37
VPS18-203ENST00000558855 AVPR1BP47901 424 aa12.77□□□□□ -0.37
VPS18-203ENST00000558855 ZNF33BQ06732 778 aa12.77□□□□□ -0.37
VPS18-203ENST00000558855 HYAL2Q12891 473 aa12.77□□□□□ -0.37
VPS18-203ENST00000558855 NDUFA9Q16795 377 aa12.77□□□□□ -0.37
VPS18-203ENST00000558855 CAPN13Q6MZZ7 669 aaPredicted RBP12.77□□□□□ -0.37
VPS18-203ENST00000558855 FAM180AQ6UWF9 173 aa12.77□□□□□ -0.37
VPS18-203ENST00000558855 RIPOR1Q6ZS17 1223 aa12.77□□□□□ -0.37
VPS18-203ENST00000558855 FJX1Q86VR8 437 aa12.77□□□□□ -0.37
VPS18-203ENST00000558855 CRLF3Q8IUI8 442 aa12.77□□□□□ -0.37
VPS18-203ENST00000558855 BEST3Q8N1M1 668 aa12.77□□□□□ -0.37
VPS18-203ENST00000558855 KIF2BQ8N4N8 673 aa12.77□□□□□ -0.37
VPS18-203ENST00000558855 AFAP1L2Q8N4X5 818 aa12.77□□□□□ -0.37
VPS18-203ENST00000558855 ANKRD53Q8N9V6 530 aa12.77□□□□□ -0.37
VPS18-203ENST00000558855 ABHD11Q8NFV4 315 aa12.77□□□□□ -0.37
VPS18-203ENST00000558855 OR4K1Q8NGD4 311 aa12.77□□□□□ -0.37
VPS18-203ENST00000558855 ANKRD49Q8WVL7 239 aa12.77□□□□□ -0.37
VPS18-203ENST00000558855 SLC13A3Q8WWT9 602 aa12.77□□□□□ -0.37
VPS18-203ENST00000558855 NR4A3Q92570 626 aa12.77□□□□□ -0.37
VPS18-203ENST00000558855 NEIL2Q969S2 332 aa12.77□□□□□ -0.37
VPS18-203ENST00000558855 TSNARE1Q96NA8 513 aa12.77□□□□□ -0.37
VPS18-203ENST00000558855 SIGLEC12Q96PQ1 595 aa12.77□□□□□ -0.37
VPS18-203ENST00000558855 NAP1L3Q99457 506 aaPredicted RBP12.77□□□□□ -0.37
VPS18-203ENST00000558855 TUBB6Q9BUF5 446 aa12.77□□□□□ -0.37
VPS18-203ENST00000558855 SMYD2Q9NRG4 433 aa12.77□□□□□ -0.37
VPS18-203ENST00000558855 ANKRD10Q9NXR5 420 aa12.77□□□□□ -0.37
VPS18-203ENST00000558855 UTP6Q9NYH9 597 aaKnown RBP12.77□□□□□ -0.37
VPS18-203ENST00000558855 GOLGA6L10A0A0M3HER8 536 aa12.76□□□□□ -0.37
VPS18-203ENST00000558855 OR5H15A6NDH6 313 aa12.76□□□□□ -0.37
VPS18-203ENST00000558855 NPEPPSL1A6NEC2 478 aa12.76□□□□□ -0.37
VPS18-203ENST00000558855 TXNDC9O14530 226 aa12.76□□□□□ -0.37
VPS18-203ENST00000558855 SLC16A5O15375 505 aa12.76□□□□□ -0.37
VPS18-203ENST00000558855 TTI1O43156 1089 aa12.76□□□□□ -0.37
VPS18-203ENST00000558855 WFS1O76024 890 aa12.76□□□□□ -0.37
VPS18-203ENST00000558855 PRF1P14222 555 aa12.76□□□□□ -0.37
VPS18-203ENST00000558855 RGS4P49798 205 aa12.76□□□□□ -0.37
VPS18-203ENST00000558855 ITGA8P53708 1063 aa12.76□□□□□ -0.37
VPS18-203ENST00000558855 BTBD16Q32M84 506 aa12.76□□□□□ -0.37
VPS18-203ENST00000558855 H3F3CQ6NXT2 135 aa12.76□□□□□ -0.37
VPS18-203ENST00000558855 BCORP1Q8N888 145 aa12.76□□□□□ -0.37
VPS18-203ENST00000558855 CAMKVQ8NCB2 501 aa12.76□□□□□ -0.37
VPS18-203ENST00000558855 FBXL8Q96CD0 374 aa12.76□□□□□ -0.37
VPS18-203ENST00000558855 SNF8Q96H20 258 aa12.76□□□□□ -0.37
VPS18-203ENST00000558855 VPS50Q96JG6 964 aa12.76□□□□□ -0.37
VPS18-203ENST00000558855 MCMBPQ9BTE3 642 aa12.76□□□□□ -0.37
VPS18-203ENST00000558855 UNKQ9C0B0 810 aaKnown RBP12.76□□□□□ -0.37
VPS18-203ENST00000558855 KLHL31Q9H511 634 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms