RNA–Protein interactions for RNA: ENST00000558739.1

SMAD3-206, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-206ENST00000558739 HSD3B7Q9H2F3 369 aa11.06□□□□□ -0.64
SMAD3-206ENST00000558739 AIPL1Q9NZN9 384 aa11.06□□□□□ -0.64
SMAD3-206ENST00000558739 B4GALT7Q9UBV7 327 aa11.06□□□□□ -0.64
SMAD3-206ENST00000558739 MYO6Q9UM54 1294 aa11.06□□□□□ -0.64
SMAD3-206ENST00000558739 TRRAPQ9Y4A5 3859 aa11.06□□□□□ -0.64
SMAD3-206ENST00000558739 ZNF860A6NHJ4 632 aa11.05□□□□□ -0.64
SMAD3-206ENST00000558739 BCKDKO14874 412 aa11.05□□□□□ -0.64
SMAD3-206ENST00000558739 RDH16O75452 317 aa11.05□□□□□ -0.64
SMAD3-206ENST00000558739 FKBP9O95302 570 aa11.05□□□□□ -0.64
SMAD3-206ENST00000558739 KRT1P04264 644 aa11.05□□□□□ -0.64
SMAD3-206ENST00000558739 BMP7P18075 431 aa11.05□□□□□ -0.64
SMAD3-206ENST00000558739 PEX19P40855 299 aa11.05□□□□□ -0.64
SMAD3-206ENST00000558739 MAGEA5P43359 124 aa11.05□□□□□ -0.64
SMAD3-206ENST00000558739 NR1H2P55055 460 aa11.05□□□□□ -0.64
SMAD3-206ENST00000558739 ACTN3Q08043 901 aaPredicted RBP11.05□□□□□ -0.64
SMAD3-206ENST00000558739 PTK6Q13882 451 aa11.05□□□□□ -0.64
SMAD3-206ENST00000558739 FBXL19-AS1Q494R0 122 aa11.05□□□□□ -0.64
SMAD3-206ENST00000558739 RIPPLY2Q5TAB7 128 aa11.05□□□□□ -0.64
SMAD3-206ENST00000558739 GARNL3Q5VVW2 1013 aa11.05□□□□□ -0.64
SMAD3-206ENST00000558739 SUSD1Q6UWL2 747 aa11.05□□□□□ -0.64
SMAD3-206ENST00000558739 PRSS57Q6UWY2 283 aa11.05□□□□□ -0.64
SMAD3-206ENST00000558739 PACS1Q6VY07 963 aa11.05□□□□□ -0.64
SMAD3-206ENST00000558739 TRILQ7L0X0 811 aa11.05□□□□□ -0.64
SMAD3-206ENST00000558739 PDSS2Q86YH6 399 aa11.05□□□□□ -0.64
SMAD3-206ENST00000558739 SLC13A5Q86YT5 568 aaPredicted RBP11.05□□□□□ -0.64
SMAD3-206ENST00000558739 KRT222Q8N1A0 295 aa11.05□□□□□ -0.64
SMAD3-206ENST00000558739 TNIP2Q8NFZ5 429 aa11.05□□□□□ -0.64
SMAD3-206ENST00000558739 PPP1R14CQ8TAE6 165 aa11.05□□□□□ -0.64
SMAD3-206ENST00000558739 SREK1Q8WXA9 508 aaKnown RBP11.05□□□□□ -0.64
SMAD3-206ENST00000558739 CAPZA3Q96KX2 299 aa11.05□□□□□ -0.64
SMAD3-206ENST00000558739 TTTY12Q9BZ98 90 aa11.05□□□□□ -0.64
SMAD3-206ENST00000558739 GBA3Q9H227 469 aa11.05□□□□□ -0.64
SMAD3-206ENST00000558739 LANCL2Q9NS86 450 aa11.05□□□□□ -0.64
SMAD3-206ENST00000558739 PIH1D1Q9NWS0 290 aaKnown RBP11.05□□□□□ -0.64
SMAD3-206ENST00000558739 KCMF1Q9P0J7 381 aa11.05□□□□□ -0.64
SMAD3-206ENST00000558739 SPRR3Q9UBC9 169 aa11.05□□□□□ -0.64
SMAD3-206ENST00000558739 PCYOX1Q9UHG3 505 aa11.05□□□□□ -0.64
SMAD3-206ENST00000558739 TSR3Q9UJK0 312 aaKnown RBP11.05□□□□□ -0.64
SMAD3-206ENST00000558739 RAI1Q7Z5J4 1906 aaPredicted RBP11.05□□□□□ -0.64
SMAD3-206ENST00000558739 FEZF1A0PJY2 475 aa11.04□□□□□ -0.64
SMAD3-206ENST00000558739 OR14I1A6ND48 311 aa11.04□□□□□ -0.64
SMAD3-206ENST00000558739 ZNF487B1APH4 448 aa11.04□□□□□ -0.64
SMAD3-206ENST00000558739 H7C0S8 307 aa11.04□□□□□ -0.64
SMAD3-206ENST00000558739 CLDN4O14493 209 aa11.04□□□□□ -0.64
SMAD3-206ENST00000558739 HAT1O14929 419 aa11.04□□□□□ -0.64
SMAD3-206ENST00000558739 SIAH2O43255 324 aa11.04□□□□□ -0.64
SMAD3-206ENST00000558739 DNAJB6O75190 326 aa11.04□□□□□ -0.64
SMAD3-206ENST00000558739 VPS26AO75436 327 aa11.04□□□□□ -0.64
SMAD3-206ENST00000558739 GPC4O75487 556 aa11.04□□□□□ -0.64
SMAD3-206ENST00000558739 GLSO94925 669 aaPredicted RBP11.04□□□□□ -0.64
SMAD3-206ENST00000558739 SIX3O95343 332 aaPredicted RBP11.04□□□□□ -0.64
SMAD3-206ENST00000558739 IGHG3P01860 377 aa11.04□□□□□ -0.64
SMAD3-206ENST00000558739 PSMB4P28070 264 aa11.04□□□□□ -0.64
SMAD3-206ENST00000558739 AVPR1BP47901 424 aa11.04□□□□□ -0.64
SMAD3-206ENST00000558739 AGFG1P52594 562 aaKnown RBP11.04□□□□□ -0.64
SMAD3-206ENST00000558739 OR4D2P58180 307 aa11.04□□□□□ -0.64
SMAD3-206ENST00000558739 PLGLB1Q02325 96 aa11.04□□□□□ -0.64
SMAD3-206ENST00000558739 DMTNQ08495 405 aa11.04□□□□□ -0.64
SMAD3-206ENST00000558739 FAM53BQ14153 422 aa11.04□□□□□ -0.64
SMAD3-206ENST00000558739 CAPRIN1Q14444 709 aaKnown RBP11.04□□□□□ -0.64
SMAD3-206ENST00000558739 ZNF425Q6IV72 752 aa11.04□□□□□ -0.64
SMAD3-206ENST00000558739 MFSD7Q6UXD7 560 aa11.04□□□□□ -0.64
SMAD3-206ENST00000558739 PSD4Q8NDX1 1056 aa11.04□□□□□ -0.64
SMAD3-206ENST00000558739 OR2M7Q8NG81 312 aa11.04□□□□□ -0.64
SMAD3-206ENST00000558739 OR5T3Q8NGG3 340 aa11.04□□□□□ -0.64
SMAD3-206ENST00000558739 ZCCHC10Q8TBK6 192 aa11.04□□□□□ -0.64
SMAD3-206ENST00000558739 QKIQ96PU8 341 aaKnown RBP eCLIP11.04□□□□□ -0.64
SMAD3-206ENST00000558739 MAK16Q9BXY0 300 aaKnown RBP11.04□□□□□ -0.64
SMAD3-206ENST00000558739 ACAD8Q9UKU7 415 aa11.04□□□□□ -0.64
SMAD3-206ENST00000558739 TTC7AQ9ULT0 858 aaPredicted RBP11.04□□□□□ -0.64
SMAD3-206ENST00000558739 DRG1Q9Y295 367 aaKnown RBP11.04□□□□□ -0.64
SMAD3-206ENST00000558739 NPFFR2Q9Y5X5 522 aa11.04□□□□□ -0.64
SMAD3-206ENST00000558739 DUSP10Q9Y6W6 482 aa11.04□□□□□ -0.64
SMAD3-206ENST00000558739 A0A087X0T9 212 aa11.03□□□□□ -0.64
SMAD3-206ENST00000558739 WDR1O75083 606 aa11.03□□□□□ -0.64
SMAD3-206ENST00000558739 NSA2O95478 260 aaKnown RBP11.03□□□□□ -0.64
SMAD3-206ENST00000558739 C1orf105O95561 183 aa11.03□□□□□ -0.64
SMAD3-206ENST00000558739 TUBB4AP04350 444 aa11.03□□□□□ -0.64
SMAD3-206ENST00000558739 RPN2P04844 631 aa11.03□□□□□ -0.64
SMAD3-206ENST00000558739 CYC1P08574 325 aa11.03□□□□□ -0.64
SMAD3-206ENST00000558739 FAM228BP0C875 321 aa11.03□□□□□ -0.64
SMAD3-206ENST00000558739 TPH1P17752 444 aa11.03□□□□□ -0.64
SMAD3-206ENST00000558739 CMPK1P30085 196 aa11.03□□□□□ -0.64
SMAD3-206ENST00000558739 FOXN2P32314 431 aa11.03□□□□□ -0.64
SMAD3-206ENST00000558739 RUNX1T1Q06455 604 aa11.03□□□□□ -0.64
SMAD3-206ENST00000558739 HYAL2Q12891 473 aa11.03□□□□□ -0.64
SMAD3-206ENST00000558739 TSTA3Q13630 321 aaPredicted RBP11.03□□□□□ -0.64
SMAD3-206ENST00000558739 VN1R4Q7Z5H5 301 aa11.03□□□□□ -0.64
SMAD3-206ENST00000558739 CCDC50Q8IVM0 306 aa11.03□□□□□ -0.64
SMAD3-206ENST00000558739 TMEM251Q8N6I4 163 aa11.03□□□□□ -0.64
SMAD3-206ENST00000558739 HMGCLL1Q8TB92 370 aa11.03□□□□□ -0.64
SMAD3-206ENST00000558739 RERGQ96A58 199 aaPredicted RBP11.03□□□□□ -0.64
SMAD3-206ENST00000558739 PEX11GQ96HA9 241 aa11.03□□□□□ -0.64
SMAD3-206ENST00000558739 CDKN2AIPNLQ96HQ2 116 aa11.03□□□□□ -0.64
SMAD3-206ENST00000558739 CCL19Q99731 98 aa11.03□□□□□ -0.64
SMAD3-206ENST00000558739 PIGQQ9BRB3 760 aa11.03□□□□□ -0.64
SMAD3-206ENST00000558739 RAB11FIP5Q9BXF6 653 aa11.03□□□□□ -0.64
SMAD3-206ENST00000558739 PACSIN1Q9BY11 444 aa11.03□□□□□ -0.64
SMAD3-206ENST00000558739 MRPS30Q9NP92 439 aaKnown RBP11.03□□□□□ -0.64
SMAD3-206ENST00000558739 NLE1Q9NVX2 485 aaPredicted RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms