RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 CUL3Q13618 768 aa16.14■□□□□ 0.17
SNX1-203ENST00000558040 SPIN4Q56A73 249 aa16.14■□□□□ 0.17
SNX1-203ENST00000558040 C6orf136Q5SQH8 315 aa16.14■□□□□ 0.17
SNX1-203ENST00000558040 CACHD1Q5VU97 1274 aa16.14■□□□□ 0.17
SNX1-203ENST00000558040 ADNP2Q6IQ32 1131 aa16.14■□□□□ 0.17
SNX1-203ENST00000558040 USP53Q70EK8 1073 aa16.14■□□□□ 0.17
SNX1-203ENST00000558040 CHSY3Q70JA7 882 aa16.14■□□□□ 0.17
SNX1-203ENST00000558040 PRSS42Q7Z5A4 293 aa16.14■□□□□ 0.17
SNX1-203ENST00000558040 VN1R5Q7Z5H4 357 aa16.14■□□□□ 0.17
SNX1-203ENST00000558040 MTDHQ86UE4 582 aaKnown RBP16.14■□□□□ 0.17
SNX1-203ENST00000558040 ZFAND4Q86XD8 727 aa16.14■□□□□ 0.17
SNX1-203ENST00000558040 ZNF655Q8N720 491 aaPredicted RBP16.14■□□□□ 0.17
SNX1-203ENST00000558040 RERGQ96A58 199 aaPredicted RBP16.14■□□□□ 0.17
SNX1-203ENST00000558040 CHRNA10Q9GZZ6 450 aa16.14■□□□□ 0.17
SNX1-203ENST00000558040 PARD6AQ9NPB6 346 aa16.14■□□□□ 0.17
SNX1-203ENST00000558040 PILRAQ9UKJ1 303 aa16.14■□□□□ 0.17
SNX1-203ENST00000558040 TMED5Q9Y3A6 229 aa16.14■□□□□ 0.17
SNX1-203ENST00000558040 CACNA1HO95180 2353 aa16.14■□□□□ 0.17
SNX1-203ENST00000558040 C4orf47A7E2U8 309 aa16.13■□□□□ 0.17
SNX1-203ENST00000558040 PROB1E7EW31 1015 aa16.13■□□□□ 0.17
SNX1-203ENST00000558040 FCHO1O14526 889 aa16.13■□□□□ 0.17
SNX1-203ENST00000558040 TOX3O15405 576 aaPredicted RBP16.13■□□□□ 0.17
SNX1-203ENST00000558040 NRP2O60462 931 aa16.13■□□□□ 0.17
SNX1-203ENST00000558040 CTSVO60911 334 aa16.13■□□□□ 0.17
SNX1-203ENST00000558040 SEMA3DO95025 777 aa16.13■□□□□ 0.17
SNX1-203ENST00000558040 TGFB1P01137 390 aa16.13■□□□□ 0.17
SNX1-203ENST00000558040 SERPIND1P05546 499 aa16.13■□□□□ 0.17
SNX1-203ENST00000558040 SLC35G6P0C7Q6 338 aa16.13■□□□□ 0.17
SNX1-203ENST00000558040 MLLT3P42568 568 aaPredicted RBP16.13■□□□□ 0.17
SNX1-203ENST00000558040 ARL4DP49703 201 aa16.13■□□□□ 0.17
SNX1-203ENST00000558040 STX1BP61266 288 aa16.13■□□□□ 0.17
SNX1-203ENST00000558040 RPL38P63173 70 aaKnown RBP16.13■□□□□ 0.17
SNX1-203ENST00000558040 CCL7P80098 99 aa16.13■□□□□ 0.17
SNX1-203ENST00000558040 EMX2Q04743 252 aa16.13■□□□□ 0.17
SNX1-203ENST00000558040 RGS1Q08116 209 aa16.13■□□□□ 0.17
SNX1-203ENST00000558040 GSTA3Q16772 222 aa16.13■□□□□ 0.17
SNX1-203ENST00000558040 TMEM35AQ53FP2 167 aa16.13■□□□□ 0.17
SNX1-203ENST00000558040 KHDRBS2Q5VWX1 349 aaKnown RBP16.13■□□□□ 0.17
SNX1-203ENST00000558040 FBXO42Q6P3S6 717 aa16.13■□□□□ 0.17
SNX1-203ENST00000558040 TMEM71Q6P5X7 295 aa16.13■□□□□ 0.17
SNX1-203ENST00000558040 ASPGQ86U10 573 aa16.13■□□□□ 0.17
SNX1-203ENST00000558040 KMT5CQ86Y97 462 aa16.13■□□□□ 0.17
SNX1-203ENST00000558040 RNF175Q8N4F7 328 aa16.13■□□□□ 0.17
SNX1-203ENST00000558040 CDC6Q99741 560 aa16.13■□□□□ 0.17
SNX1-203ENST00000558040 MS4A8Q9BY19 250 aa16.13■□□□□ 0.17
SNX1-203ENST00000558040 NMUR2Q9GZQ4 415 aa16.13■□□□□ 0.17
SNX1-203ENST00000558040 SYNDIG1Q9H7V2 258 aa16.13■□□□□ 0.17
SNX1-203ENST00000558040 PDE7BQ9NP56 450 aa16.13■□□□□ 0.17
SNX1-203ENST00000558040 RXFP3Q9NSD7 469 aa16.13■□□□□ 0.17
SNX1-203ENST00000558040 SOHLH2Q9NX45 425 aa16.13■□□□□ 0.17
SNX1-203ENST00000558040 AHSPQ9NZD4 102 aa16.13■□□□□ 0.17
SNX1-203ENST00000558040 NOP53Q9NZM5 478 aaKnown RBP16.13■□□□□ 0.17
SNX1-203ENST00000558040 KLHL3Q9UH77 587 aa16.13■□□□□ 0.17
SNX1-203ENST00000558040 EIF3LQ9Y262 564 aaKnown RBP16.13■□□□□ 0.17
SNX1-203ENST00000558040 HEATR5BQ9P2D3 2071 aa16.12■□□□□ 0.17
SNX1-203ENST00000558040 A0A0J9YVX5 310 aa16.12■□□□□ 0.17
SNX1-203ENST00000558040 EBAG9O00559 213 aa16.12■□□□□ 0.17
SNX1-203ENST00000558040 NDUFS4O43181 175 aa16.12■□□□□ 0.17
SNX1-203ENST00000558040 KIF1CO43896 1103 aaKnown RBP16.12■□□□□ 0.17
SNX1-203ENST00000558040 SH3BP5O60239 455 aa16.12■□□□□ 0.17
SNX1-203ENST00000558040 MYO1DO94832 1006 aa16.12■□□□□ 0.17
SNX1-203ENST00000558040 HOXB3P14651 431 aaPredicted RBP16.12■□□□□ 0.17
SNX1-203ENST00000558040 IDO1P14902 403 aa16.12■□□□□ 0.17
SNX1-203ENST00000558040 ACPPP15309 386 aa16.12■□□□□ 0.17
SNX1-203ENST00000558040 PCSK2P16519 638 aa16.12■□□□□ 0.17
SNX1-203ENST00000558040 ATP4BP51164 291 aa16.12■□□□□ 0.17
SNX1-203ENST00000558040 RAP1GDS1P52306 607 aa16.12■□□□□ 0.17
SNX1-203ENST00000558040 STXBP1P61764 594 aaKnown RBP16.12■□□□□ 0.17
SNX1-203ENST00000558040 CFHR1Q03591 330 aa16.12■□□□□ 0.17
SNX1-203ENST00000558040 ACSM2AQ08AH3 577 aa16.12■□□□□ 0.17
SNX1-203ENST00000558040 PWP1Q13610 501 aa16.12■□□□□ 0.17
SNX1-203ENST00000558040 SQLEQ14534 574 aa16.12■□□□□ 0.17
SNX1-203ENST00000558040 ZIC1Q15915 447 aa16.12■□□□□ 0.17
SNX1-203ENST00000558040 DEPDC1Q5TB30 811 aa16.12■□□□□ 0.17
SNX1-203ENST00000558040 TMEM198Q66K66 360 aa16.12■□□□□ 0.17
SNX1-203ENST00000558040 ACSM2BQ68CK6 577 aa16.12■□□□□ 0.17
SNX1-203ENST00000558040 TRPM8Q7Z2W7 1104 aa16.12■□□□□ 0.17
SNX1-203ENST00000558040 CAMKVQ8NCB2 501 aa16.12■□□□□ 0.17
SNX1-203ENST00000558040 OR4D9Q8NGE8 314 aa16.12■□□□□ 0.17
SNX1-203ENST00000558040 WDR48Q8TAF3 677 aa16.12■□□□□ 0.17
SNX1-203ENST00000558040 CREB3L4Q8TEY5 395 aa16.12■□□□□ 0.17
SNX1-203ENST00000558040 SLC13A3Q8WWT9 602 aa16.12■□□□□ 0.17
SNX1-203ENST00000558040 CATSPER2Q96P56 530 aa16.12■□□□□ 0.17
SNX1-203ENST00000558040 OR2A5Q96R48 311 aa16.12■□□□□ 0.17
SNX1-203ENST00000558040 GFM1Q96RP9 751 aaKnown RBP16.12■□□□□ 0.17
SNX1-203ENST00000558040 NUDT22Q9BRQ3 303 aa16.12■□□□□ 0.17
SNX1-203ENST00000558040 NLNQ9BYT8 704 aa16.12■□□□□ 0.17
SNX1-203ENST00000558040 OR51B5Q9H339 312 aa16.12■□□□□ 0.17
SNX1-203ENST00000558040 ASIC5Q9NY37 505 aa16.12■□□□□ 0.17
SNX1-203ENST00000558040 SEMA5BQ9P283 1151 aa16.12■□□□□ 0.17
SNX1-203ENST00000558040 GIMAP2Q9UG22 337 aa16.12■□□□□ 0.17
SNX1-203ENST00000558040 RUVBL1Q9Y265 456 aaKnown RBP16.12■□□□□ 0.17
SNX1-203ENST00000558040 IGHV5-51A0A0C4DH38 117 aa16.11■□□□□ 0.17
SNX1-203ENST00000558040 A0A1W2PQM1 296 aa16.11■□□□□ 0.17
SNX1-203ENST00000558040 URADA6NGE7 173 aa16.11■□□□□ 0.17
SNX1-203ENST00000558040 SNRNP200O75643 2136 aaKnown RBP16.11■□□□□ 0.17
SNX1-203ENST00000558040 ETHE1O95571 254 aa16.11■□□□□ 0.17
SNX1-203ENST00000558040 TGM1P22735 817 aa16.11■□□□□ 0.17
SNX1-203ENST00000558040 ADSLP30566 484 aaPredicted RBP16.11■□□□□ 0.17
SNX1-203ENST00000558040 HSD11B2P80365 405 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms