RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 BTBD16Q32M84 506 aa13.83□□□□□ -0.2
SHMT2-235ENST00000557740 MSS51Q4VC12 460 aa13.83□□□□□ -0.2
SHMT2-235ENST00000557740 ZNF787Q6DD87 383 aa13.83□□□□□ -0.2
SHMT2-235ENST00000557740 CPEB2Q7Z5Q1 589 aaKnown RBP13.83□□□□□ -0.2
SHMT2-235ENST00000557740 GALNT7Q86SF2 657 aa13.83□□□□□ -0.2
SHMT2-235ENST00000557740 TBC1D19Q8N5T2 526 aa13.83□□□□□ -0.2
SHMT2-235ENST00000557740 KCT2Q8NC54 265 aa13.83□□□□□ -0.2
SHMT2-235ENST00000557740 ATL1Q8WXF7 558 aa13.83□□□□□ -0.2
SHMT2-235ENST00000557740 NR4A3Q92570 626 aa13.83□□□□□ -0.2
SHMT2-235ENST00000557740 SLCO2A1Q92959 643 aa13.83□□□□□ -0.2
SHMT2-235ENST00000557740 IMMP1LQ96LU5 166 aa13.83□□□□□ -0.2
SHMT2-235ENST00000557740 CYTH2Q99418 400 aa13.83□□□□□ -0.2
SHMT2-235ENST00000557740 SLC17A6Q9P2U8 582 aa13.83□□□□□ -0.2
SHMT2-235ENST00000557740 CORO1CQ9ULV4 474 aaPredicted RBP13.83□□□□□ -0.2
SHMT2-235ENST00000557740 CHMP2BQ9UQN3 213 aa13.83□□□□□ -0.2
SHMT2-235ENST00000557740 MDC1Q14676 2089 aaKnown RBP13.83□□□□□ -0.2
SHMT2-235ENST00000557740 IGHV3-20A0A0C4DH32 117 aa13.82□□□□□ -0.2
SHMT2-235ENST00000557740 OR5H15A6NDH6 313 aa13.82□□□□□ -0.2
SHMT2-235ENST00000557740 NDUFS4O43181 175 aa13.82□□□□□ -0.2
SHMT2-235ENST00000557740 TSPAN12O95859 305 aa13.82□□□□□ -0.2
SHMT2-235ENST00000557740 TCP1P17987 556 aaKnown RBP13.82□□□□□ -0.2
SHMT2-235ENST00000557740 AGTR2P50052 363 aa13.82□□□□□ -0.2
SHMT2-235ENST00000557740 SKP1P63208 163 aa13.82□□□□□ -0.2
SHMT2-235ENST00000557740 MORF4L2Q15014 288 aa13.82□□□□□ -0.2
SHMT2-235ENST00000557740 HERC3Q15034 1050 aa13.82□□□□□ -0.2
SHMT2-235ENST00000557740 HECTD2Q5U5R9 776 aa13.82□□□□□ -0.2
SHMT2-235ENST00000557740 DUPD1Q68J44 220 aa13.82□□□□□ -0.2
SHMT2-235ENST00000557740 PLAG1Q6DJT9 500 aa13.82□□□□□ -0.2
SHMT2-235ENST00000557740 FAM45BPQ6NSW5 357 aa13.82□□□□□ -0.2
SHMT2-235ENST00000557740 SLC26A11Q86WA9 606 aa13.82□□□□□ -0.2
SHMT2-235ENST00000557740 IGDCC3Q8IVU1 814 aa13.82□□□□□ -0.2
SHMT2-235ENST00000557740 MFSD9Q8NBP5 474 aa13.82□□□□□ -0.2
SHMT2-235ENST00000557740 FAM45AQ8TCE6 357 aa13.82□□□□□ -0.2
SHMT2-235ENST00000557740 PYCR2Q96C36 320 aa13.82□□□□□ -0.2
SHMT2-235ENST00000557740 TM4SF19Q96DZ7 209 aa13.82□□□□□ -0.2
SHMT2-235ENST00000557740 TAAR6Q96RI8 345 aa13.82□□□□□ -0.2
SHMT2-235ENST00000557740 RBCK1Q9BYM8 510 aa13.82□□□□□ -0.2
SHMT2-235ENST00000557740 TRMT1Q9NXH9 659 aaKnown RBP13.82□□□□□ -0.2
SHMT2-235ENST00000557740 NAALAD2Q9Y3Q0 740 aa13.82□□□□□ -0.2
SHMT2-235ENST00000557740 SLC22A7Q9Y694 548 aa13.82□□□□□ -0.2
SHMT2-235ENST00000557740 CENPEQ02224 2701 aa13.82□□□□□ -0.2
SHMT2-235ENST00000557740 MYO9AB2RTY4 2548 aa13.82□□□□□ -0.2
SHMT2-235ENST00000557740 A0A1B0GUH1 482 aa13.81□□□□□ -0.2
SHMT2-235ENST00000557740 ZNF860A6NHJ4 632 aa13.81□□□□□ -0.2
SHMT2-235ENST00000557740 A8MUI8 341 aa13.81□□□□□ -0.2
SHMT2-235ENST00000557740 OR1F1O43749 312 aa13.81□□□□□ -0.2
SHMT2-235ENST00000557740 LCMT2O60294 686 aaKnown RBP13.81□□□□□ -0.2
SHMT2-235ENST00000557740 RASAL1O95294 804 aa13.81□□□□□ -0.2
SHMT2-235ENST00000557740 CRYABP02511 175 aaKnown RBP13.81□□□□□ -0.2
SHMT2-235ENST00000557740 SERPIND1P05546 499 aa13.81□□□□□ -0.2
SHMT2-235ENST00000557740 STSP08842 583 aa13.81□□□□□ -0.2
SHMT2-235ENST00000557740 ENO2P09104 434 aaPredicted RBP13.81□□□□□ -0.2
SHMT2-235ENST00000557740 NPPBP16860 134 aa13.81□□□□□ -0.2
SHMT2-235ENST00000557740 ELK3P41970 407 aa13.81□□□□□ -0.2
SHMT2-235ENST00000557740 ABRAXAS2Q15018 415 aa13.81□□□□□ -0.2
SHMT2-235ENST00000557740 EXT1Q16394 746 aa13.81□□□□□ -0.2
SHMT2-235ENST00000557740 HP1BP3Q5SSJ5 553 aaPredicted RBP13.81□□□□□ -0.2
SHMT2-235ENST00000557740 TEDDM1Q5T9Z0 273 aa13.81□□□□□ -0.2
SHMT2-235ENST00000557740 ZNF324BQ6AW86 544 aaPredicted RBP13.81□□□□□ -0.2
SHMT2-235ENST00000557740 GFRALQ6UXV0 394 aa13.81□□□□□ -0.2
SHMT2-235ENST00000557740 SYDE1Q6ZW31 735 aaPredicted RBP13.81□□□□□ -0.2
SHMT2-235ENST00000557740 ANKRD37Q7Z713 158 aa13.81□□□□□ -0.2
SHMT2-235ENST00000557740 FJX1Q86VR8 437 aa13.81□□□□□ -0.2
SHMT2-235ENST00000557740 PDSS2Q86YH6 399 aa13.81□□□□□ -0.2
SHMT2-235ENST00000557740 KLHL7Q8IXQ5 586 aa13.81□□□□□ -0.2
SHMT2-235ENST00000557740 ABHD11Q8NFV4 315 aa13.81□□□□□ -0.2
SHMT2-235ENST00000557740 OR56A3Q8NH54 315 aa13.81□□□□□ -0.2
SHMT2-235ENST00000557740 FBXL8Q96CD0 374 aa13.81□□□□□ -0.2
SHMT2-235ENST00000557740 SNF8Q96H20 258 aa13.81□□□□□ -0.2
SHMT2-235ENST00000557740 CAPZA3Q96KX2 299 aa13.81□□□□□ -0.2
SHMT2-235ENST00000557740 RUNDC3BQ96NL0 473 aa13.81□□□□□ -0.2
SHMT2-235ENST00000557740 OR1F2PQ96R84 312 aa13.81□□□□□ -0.2
SHMT2-235ENST00000557740 STMN3Q9NZ72 180 aa13.81□□□□□ -0.2
SHMT2-235ENST00000557740 ABI3Q9P2A4 366 aa13.81□□□□□ -0.2
SHMT2-235ENST00000557740 DIDO1Q9BTC0 2240 aaKnown RBP13.8□□□□□ -0.2
SHMT2-235ENST00000557740 NBPF19A0A087WUL8 3843 aa13.8□□□□□ -0.2
SHMT2-235ENST00000557740 TRBC2A0A5B9 178 aa13.8□□□□□ -0.2
SHMT2-235ENST00000557740 PRAMEF2O60811 474 aa13.8□□□□□ -0.2
SHMT2-235ENST00000557740 CDC123O75794 336 aaPredicted RBP13.8□□□□□ -0.2
SHMT2-235ENST00000557740 GUCA1CO95843 209 aa13.8□□□□□ -0.2
SHMT2-235ENST00000557740 IL10P22301 178 aa13.8□□□□□ -0.2
SHMT2-235ENST00000557740 TDGF1P3P51864 188 aa13.8□□□□□ -0.2
SHMT2-235ENST00000557740 ARL4CP56559 192 aa13.8□□□□□ -0.2
SHMT2-235ENST00000557740 KCNK10P57789 538 aa13.8□□□□□ -0.2
SHMT2-235ENST00000557740 DR1Q01658 176 aa13.8□□□□□ -0.2
SHMT2-235ENST00000557740 MEF2AQ02078 507 aaPredicted RBP13.8□□□□□ -0.2
SHMT2-235ENST00000557740 ACTN3Q08043 901 aaPredicted RBP13.8□□□□□ -0.2
SHMT2-235ENST00000557740 RGS1Q08116 209 aa13.8□□□□□ -0.2
SHMT2-235ENST00000557740 CSHL1Q14406 222 aa13.8□□□□□ -0.2
SHMT2-235ENST00000557740 NSDHLQ15738 373 aa13.8□□□□□ -0.2
SHMT2-235ENST00000557740 SFT2D3Q587I9 215 aa13.8□□□□□ -0.2
SHMT2-235ENST00000557740 ACER2Q5QJU3 275 aa13.8□□□□□ -0.2
SHMT2-235ENST00000557740 C1QL3Q5VWW1 255 aa13.8□□□□□ -0.2
SHMT2-235ENST00000557740 TRMT10BQ6PF06 316 aaKnown RBP13.8□□□□□ -0.2
SHMT2-235ENST00000557740 LRRC39Q96DD0 335 aa13.8□□□□□ -0.2
SHMT2-235ENST00000557740 PEX11GQ96HA9 241 aa13.8□□□□□ -0.2
SHMT2-235ENST00000557740 ZNF354BQ96LW1 612 aa13.8□□□□□ -0.2
SHMT2-235ENST00000557740 KCNK13Q9HB14 408 aa13.8□□□□□ -0.2
SHMT2-235ENST00000557740 ZFATQ9P243 1243 aa13.8□□□□□ -0.2
SHMT2-235ENST00000557740 VWA7Q9Y334 891 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms