RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 EEF1DP29692 281 aaKnown RBP13.26□□□□□ -0.29
SLIRP-210ENST00000557431 BCL6P41182 706 aa13.26□□□□□ -0.29
SLIRP-210ENST00000557431 CSNK1G2P78368 415 aa13.26□□□□□ -0.29
SLIRP-210ENST00000557431 ABATP80404 500 aa13.26□□□□□ -0.29
SLIRP-210ENST00000557431 MPP1Q00013 466 aa13.26□□□□□ -0.29
SLIRP-210ENST00000557431 MEF2AQ02078 507 aaPredicted RBP13.26□□□□□ -0.29
SLIRP-210ENST00000557431 CCNG2Q16589 344 aa13.26□□□□□ -0.29
SLIRP-210ENST00000557431 MEP1AQ16819 746 aa13.26□□□□□ -0.29
SLIRP-210ENST00000557431 RNFT1Q5M7Z0 435 aa13.26□□□□□ -0.29
SLIRP-210ENST00000557431 TMEM214Q6NUQ4 689 aaKnown RBP13.26□□□□□ -0.29
SLIRP-210ENST00000557431 NEPROQ6NW34 567 aa13.26□□□□□ -0.29
SLIRP-210ENST00000557431 MTFR2Q6P444 385 aa13.26□□□□□ -0.29
SLIRP-210ENST00000557431 XKRXQ6PP77 449 aa13.26□□□□□ -0.29
SLIRP-210ENST00000557431 UBE2R2Q712K3 238 aaPredicted RBP13.26□□□□□ -0.29
SLIRP-210ENST00000557431 FGD2Q7Z6J4 655 aa13.26□□□□□ -0.29
SLIRP-210ENST00000557431 SLC26A11Q86WA9 606 aa13.26□□□□□ -0.29
SLIRP-210ENST00000557431 CHERPQ8IWX8 916 aaKnown RBP13.26□□□□□ -0.29
SLIRP-210ENST00000557431 CPSF7Q8N684 471 aaKnown RBP13.26□□□□□ -0.29
SLIRP-210ENST00000557431 AGAP11Q8TF27 550 aa13.26□□□□□ -0.29
SLIRP-210ENST00000557431 SCMH1Q96GD3 660 aa13.26□□□□□ -0.29
SLIRP-210ENST00000557431 UTP23Q9BRU9 249 aaKnown RBP13.26□□□□□ -0.29
SLIRP-210ENST00000557431 ATG10Q9H0Y0 220 aa13.26□□□□□ -0.29
SLIRP-210ENST00000557431 CDCP1Q9H5V8 836 aa13.26□□□□□ -0.29
SLIRP-210ENST00000557431 UTP6Q9NYH9 597 aaKnown RBP13.26□□□□□ -0.29
SLIRP-210ENST00000557431 C19orf25Q9UFG5 118 aaPredicted RBP13.26□□□□□ -0.29
SLIRP-210ENST00000557431 MEMO1Q9Y316 297 aa13.26□□□□□ -0.29
SLIRP-210ENST00000557431 NAALAD2Q9Y3Q0 740 aa13.26□□□□□ -0.29
SLIRP-210ENST00000557431 HIVEP1P15822 2718 aa13.26□□□□□ -0.29
SLIRP-210ENST00000557431 ZNF839A8K0R7 811 aa13.25□□□□□ -0.29
SLIRP-210ENST00000557431 GOLGA8MH3BSY2 632 aa13.25□□□□□ -0.29
SLIRP-210ENST00000557431 TXNDC9O14530 226 aa13.25□□□□□ -0.29
SLIRP-210ENST00000557431 MPC1LP0DKB6 136 aa13.25□□□□□ -0.29
SLIRP-210ENST00000557431 ABOP16442 354 aa13.25□□□□□ -0.29
SLIRP-210ENST00000557431 TPSB2P20231 275 aa13.25□□□□□ -0.29
SLIRP-210ENST00000557431 RFC3P40938 356 aa13.25□□□□□ -0.29
SLIRP-210ENST00000557431 SLC1A2P43004 574 aa13.25□□□□□ -0.29
SLIRP-210ENST00000557431 SMSP52788 366 aa13.25□□□□□ -0.29
SLIRP-210ENST00000557431 PGGT1BP53609 377 aa13.25□□□□□ -0.29
SLIRP-210ENST00000557431 ADARP55265 1226 aaKnown RBP13.25□□□□□ -0.29
SLIRP-210ENST00000557431 RHAGQ02094 409 aa13.25□□□□□ -0.29
SLIRP-210ENST00000557431 DHX34Q14147 1143 aaKnown RBP13.25□□□□□ -0.29
SLIRP-210ENST00000557431 ABRAXAS2Q15018 415 aa13.25□□□□□ -0.29
SLIRP-210ENST00000557431 TPSAB1Q15661 275 aa13.25□□□□□ -0.29
SLIRP-210ENST00000557431 MAPKAPK3Q16644 382 aa13.25□□□□□ -0.29
SLIRP-210ENST00000557431 SIAH3Q8IW03 269 aa13.25□□□□□ -0.29
SLIRP-210ENST00000557431 CEP97Q8IW35 865 aa13.25□□□□□ -0.29
SLIRP-210ENST00000557431 CD200R1Q8TD46 325 aa13.25□□□□□ -0.29
SLIRP-210ENST00000557431 ASB11Q8WXH4 323 aa13.25□□□□□ -0.29
SLIRP-210ENST00000557431 TCF12Q99081 682 aa13.25□□□□□ -0.29
SLIRP-210ENST00000557431 ANKHQ9HCJ1 492 aa13.25□□□□□ -0.29
SLIRP-210ENST00000557431 CCDC177Q9NQR7 707 aaPredicted RBP13.25□□□□□ -0.29
SLIRP-210ENST00000557431 LANCL2Q9NS86 450 aa13.25□□□□□ -0.29
SLIRP-210ENST00000557431 TMEM184CQ9NVA4 438 aa13.25□□□□□ -0.29
SLIRP-210ENST00000557431 DRG1Q9Y295 367 aaKnown RBP13.25□□□□□ -0.29
SLIRP-210ENST00000557431 ASPDHA6ND91 283 aa13.24□□□□□ -0.29
SLIRP-210ENST00000557431 GFYI3L273 518 aa13.24□□□□□ -0.29
SLIRP-210ENST00000557431 ASNA1O43681 348 aa13.24□□□□□ -0.29
SLIRP-210ENST00000557431 KIF5CO60282 957 aa13.24□□□□□ -0.29
SLIRP-210ENST00000557431 DIAPH2O60879 1101 aa13.24□□□□□ -0.29
SLIRP-210ENST00000557431 NEURL1O76050 574 aa13.24□□□□□ -0.29
SLIRP-210ENST00000557431 FGGP02679 453 aa13.24□□□□□ -0.29
SLIRP-210ENST00000557431 CDH1P12830 882 aa13.24□□□□□ -0.29
SLIRP-210ENST00000557431 CD46P15529 392 aa13.24□□□□□ -0.29
SLIRP-210ENST00000557431 PTGER1P34995 402 aa13.24□□□□□ -0.29
SLIRP-210ENST00000557431 SKIV2L2P42285 1042 aaKnown RBP13.24□□□□□ -0.29
SLIRP-210ENST00000557431 NR0B1P51843 470 aaKnown RBP13.24□□□□□ -0.29
SLIRP-210ENST00000557431 SLC26A5P58743 744 aa13.24□□□□□ -0.29
SLIRP-210ENST00000557431 RPS15AP62244 130 aaKnown RBP13.24□□□□□ -0.29
SLIRP-210ENST00000557431 AP2B1P63010 937 aa13.24□□□□□ -0.29
SLIRP-210ENST00000557431 TLE4Q04727 773 aa13.24□□□□□ -0.29
SLIRP-210ENST00000557431 ACTN3Q08043 901 aaPredicted RBP13.24□□□□□ -0.29
SLIRP-210ENST00000557431 USP10Q14694 798 aaKnown RBP13.24□□□□□ -0.29
SLIRP-210ENST00000557431 RPS6KA1Q15418 735 aa13.24□□□□□ -0.29
SLIRP-210ENST00000557431 NSDHLQ15738 373 aa13.24□□□□□ -0.29
SLIRP-210ENST00000557431 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.24□□□□□ -0.295e-7■■■■□ 21.9
SLIRP-210ENST00000557431 TTLL9Q3SXZ7 439 aa13.24□□□□□ -0.29
SLIRP-210ENST00000557431 MEI1Q5TIA1 1274 aa13.24□□□□□ -0.29
SLIRP-210ENST00000557431 Q6ZPB1 254 aaPredicted RBP13.24□□□□□ -0.29
SLIRP-210ENST00000557431 ASPGQ86U10 573 aa13.24□□□□□ -0.29
SLIRP-210ENST00000557431 CAND1Q86VP6 1230 aaKnown RBP13.24□□□□□ -0.29
SLIRP-210ENST00000557431 DOLPP1Q86YN1 238 aa13.24□□□□□ -0.29
SLIRP-210ENST00000557431 AGGF1Q8N302 714 aaeCLIP13.24□□□□□ -0.29
SLIRP-210ENST00000557431 FBXO15Q8NCQ5 510 aaPredicted RBP13.24□□□□□ -0.29
SLIRP-210ENST00000557431 THAP3Q8WTV1 239 aaPredicted RBP13.24□□□□□ -0.29
SLIRP-210ENST00000557431 SDCCAG3Q96C92 435 aa13.24□□□□□ -0.29
SLIRP-210ENST00000557431 NDNQ99608 321 aa13.24□□□□□ -0.29
SLIRP-210ENST00000557431 TRIM51Q9BSJ1 452 aa13.24□□□□□ -0.29
SLIRP-210ENST00000557431 SPNS1Q9H2V7 528 aa13.24□□□□□ -0.29
SLIRP-210ENST00000557431 MMP25Q9NPA2 562 aa13.24□□□□□ -0.29
SLIRP-210ENST00000557431 LRFN1Q9P244 771 aa13.24□□□□□ -0.29
SLIRP-210ENST00000557431 DHRS7Q9Y394 339 aa13.24□□□□□ -0.29
SLIRP-210ENST00000557431 AKAP6Q13023 2319 aa13.24□□□□□ -0.29
SLIRP-210ENST00000557431 CTAGE15A4D2H0 777 aa13.23□□□□□ -0.29
SLIRP-210ENST00000557431 A8MUA0 341 aa13.23□□□□□ -0.29
SLIRP-210ENST00000557431 ADAM10O14672 748 aa13.23□□□□□ -0.29
SLIRP-210ENST00000557431 PFDN6O15212 129 aa13.23□□□□□ -0.29
SLIRP-210ENST00000557431 ZBTB14O43829 449 aa13.23□□□□□ -0.29
SLIRP-210ENST00000557431 HAUS5O94927 633 aa13.23□□□□□ -0.29
SLIRP-210ENST00000557431 SERPIND1P05546 499 aa13.23□□□□□ -0.29
SLIRP-210ENST00000557431 SP1P08047 785 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms