RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 SPATA16Q9BXB7 569 aa4.34□□□□□ -1.71
SRP54-212ENST00000556992 NUSAP1Q9BXS6 441 aaKnown RBP4.34□□□□□ -1.71
SRP54-212ENST00000556992 EBF3Q9H4W6 596 aa4.34□□□□□ -1.71
SRP54-212ENST00000556992 EPHX3Q9H6B9 360 aa4.34□□□□□ -1.71
SRP54-212ENST00000556992 DCLRE1BQ9H816 532 aa4.34□□□□□ -1.71
SRP54-212ENST00000556992 CERS4Q9HA82 394 aa4.34□□□□□ -1.71
SRP54-212ENST00000556992 RDH14Q9HBH5 336 aa4.34□□□□□ -1.71
SRP54-212ENST00000556992 PCDH12Q9NPG4 1184 aa4.34□□□□□ -1.71
SRP54-212ENST00000556992 DYRK4Q9NR20 520 aa4.34□□□□□ -1.71
SRP54-212ENST00000556992 SMOXQ9NWM0 555 aa4.34□□□□□ -1.71
SRP54-212ENST00000556992 UTP6Q9NYH9 597 aaKnown RBP4.34□□□□□ -1.71
SRP54-212ENST00000556992 NFKBIL1Q9UBC1 381 aaPredicted RBP4.34□□□□□ -1.71
SRP54-212ENST00000556992 PTBP2Q9UKA9 531 aaKnown RBP4.34□□□□□ -1.71
SRP54-212ENST00000556992 ANGPTL3Q9Y5C1 460 aa4.34□□□□□ -1.71
SRP54-212ENST00000556992 ARHGEF17Q96PE2 2063 aaPredicted RBP4.33□□□□□ -1.72
SRP54-212ENST00000556992 TSC2P49815 1807 aa4.33□□□□□ -1.72
SRP54-212ENST00000556992 COL4A6Q14031 1691 aa4.33□□□□□ -1.72
SRP54-212ENST00000556992 A0A088AWK7 358 aa4.33□□□□□ -1.72
SRP54-212ENST00000556992 ZNF891A8MT65 544 aaPredicted RBP4.33□□□□□ -1.72
SRP54-212ENST00000556992 IQCF5A8MTL0 148 aa4.33□□□□□ -1.72
SRP54-212ENST00000556992 TMEM233B4DJY2 109 aa4.33□□□□□ -1.72
SRP54-212ENST00000556992 PRRT4C9JH25 899 aa4.33□□□□□ -1.72
SRP54-212ENST00000556992 KPNA3O00505 521 aaPredicted RBP4.33□□□□□ -1.72
SRP54-212ENST00000556992 SDHDO14521 159 aa4.33□□□□□ -1.72
SRP54-212ENST00000556992 NEMP1O14524 444 aa4.33□□□□□ -1.72
SRP54-212ENST00000556992 FFAR2O15552 330 aa4.33□□□□□ -1.72
SRP54-212ENST00000556992 RNASEH1O60930 286 aaKnown RBP4.33□□□□□ -1.72
SRP54-212ENST00000556992 KATNA1O75449 491 aa4.33□□□□□ -1.72
SRP54-212ENST00000556992 SIX3O95343 332 aaPredicted RBP4.33□□□□□ -1.72
SRP54-212ENST00000556992 MATN4O95460 622 aa4.33□□□□□ -1.72
SRP54-212ENST00000556992 FTH1P02794 183 aa4.33□□□□□ -1.72
SRP54-212ENST00000556992 RPS17P08708 135 aaKnown RBP4.33□□□□□ -1.72
SRP54-212ENST00000556992 ANXA5P08758 320 aa4.33□□□□□ -1.72
SRP54-212ENST00000556992 MPC1LP0DKB6 136 aa4.33□□□□□ -1.72
SRP54-212ENST00000556992 LAMP2P13473 410 aa4.33□□□□□ -1.72
SRP54-212ENST00000556992 IDO1P14902 403 aa4.33□□□□□ -1.72
SRP54-212ENST00000556992 ARSAP15289 507 aa4.33□□□□□ -1.72
SRP54-212ENST00000556992 PSMC3P17980 439 aa4.33□□□□□ -1.72
SRP54-212ENST00000556992 LBPP18428 481 aa4.33□□□□□ -1.72
SRP54-212ENST00000556992 LHCGRP22888 699 aa4.33□□□□□ -1.72
SRP54-212ENST00000556992 AKT1P31749 480 aa4.33□□□□□ -1.72
SRP54-212ENST00000556992 GCKP35557 465 aa4.33□□□□□ -1.72
SRP54-212ENST00000556992 GGT5P36269 586 aa4.33□□□□□ -1.72
SRP54-212ENST00000556992 CPOXP36551 454 aa4.33□□□□□ -1.72
SRP54-212ENST00000556992 MPLP40238 635 aa4.33□□□□□ -1.72
SRP54-212ENST00000556992 EIF2DP41214 584 aaKnown RBP4.33□□□□□ -1.72
SRP54-212ENST00000556992 TNFRSF4P43489 277 aa4.33□□□□□ -1.72
SRP54-212ENST00000556992 HNMTP50135 292 aa4.33□□□□□ -1.72
SRP54-212ENST00000556992 STX1BP61266 288 aa4.33□□□□□ -1.72
SRP54-212ENST00000556992 CDKL1Q00532 357 aa4.33□□□□□ -1.72
SRP54-212ENST00000556992 PLOD1Q02809 727 aaPredicted RBP4.33□□□□□ -1.72
SRP54-212ENST00000556992 CUL3Q13618 768 aa4.33□□□□□ -1.72
SRP54-212ENST00000556992 SQLEQ14534 574 aa4.33□□□□□ -1.72
SRP54-212ENST00000556992 ELAVL3Q14576 367 aaKnown RBP4.33□□□□□ -1.72
SRP54-212ENST00000556992 ACOX1Q15067 660 aa4.33□□□□□ -1.72
SRP54-212ENST00000556992 PDCD2Q16342 344 aaPredicted RBP4.33□□□□□ -1.72
SRP54-212ENST00000556992 RBBP7Q16576 425 aa4.33□□□□□ -1.72
SRP54-212ENST00000556992 GSTA3Q16772 222 aa4.33□□□□□ -1.72
SRP54-212ENST00000556992 TRMT5Q32P41 509 aaKnown RBP4.33□□□□□ -1.72
SRP54-212ENST00000556992 ITPRIPL2Q3MIP1 535 aa4.33□□□□□ -1.72
SRP54-212ENST00000556992 ACSBG2Q5FVE4 666 aa4.33□□□□□ -1.72
SRP54-212ENST00000556992 TANGO2Q6ICL3 276 aa4.33□□□□□ -1.72
SRP54-212ENST00000556992 SDE2Q6IQ49 451 aa4.33□□□□□ -1.72
SRP54-212ENST00000556992 PGM2L1Q6PCE3 622 aa4.33□□□□□ -1.72
SRP54-212ENST00000556992 SERPINA13PQ6UXR4 307 aa4.33□□□□□ -1.72
SRP54-212ENST00000556992 Q6ZVL8 140 aa4.33□□□□□ -1.72
SRP54-212ENST00000556992 NEK10Q6ZWH5 1172 aa4.33□□□□□ -1.72
SRP54-212ENST00000556992 HSD11B1LQ7Z5J1 315 aa4.33□□□□□ -1.72
SRP54-212ENST00000556992 TECPR1Q7Z6L1 1165 aa4.33□□□□□ -1.72
SRP54-212ENST00000556992 DDIASQ8IXT1 998 aa4.33□□□□□ -1.72
SRP54-212ENST00000556992 PELI3Q8N2H9 469 aa4.33□□□□□ -1.72
SRP54-212ENST00000556992 MIER2Q8N344 545 aa4.33□□□□□ -1.72
SRP54-212ENST00000556992 FBXW8Q8N3Y1 598 aa4.33□□□□□ -1.72
SRP54-212ENST00000556992 ENDOVQ8N8Q3 282 aaKnown RBP4.33□□□□□ -1.72
SRP54-212ENST00000556992 PCYOX1LQ8NBM8 494 aa4.33□□□□□ -1.72
SRP54-212ENST00000556992 DDHD1Q8NEL9 900 aa4.33□□□□□ -1.72
SRP54-212ENST00000556992 METTL6Q8TCB7 284 aa4.33□□□□□ -1.72
SRP54-212ENST00000556992 TSPEARQ8WU66 669 aa4.33□□□□□ -1.72
SRP54-212ENST00000556992 STMN2Q93045 179 aa4.33□□□□□ -1.72
SRP54-212ENST00000556992 EXT2Q93063 718 aa4.33□□□□□ -1.72
SRP54-212ENST00000556992 ELSPBP1Q96BH3 223 aa4.33□□□□□ -1.72
SRP54-212ENST00000556992 AP2M1Q96CW1 435 aa4.33□□□□□ -1.72
SRP54-212ENST00000556992 C19orf60Q96EN9 201 aa4.33□□□□□ -1.72
SRP54-212ENST00000556992 PRR11Q96HE9 360 aaPredicted RBP4.33□□□□□ -1.72
SRP54-212ENST00000556992 ZNF514Q96K75 400 aaPredicted RBP4.33□□□□□ -1.72
SRP54-212ENST00000556992 COQ10AQ96MF6 247 aa4.33□□□□□ -1.72
SRP54-212ENST00000556992 RIPOR3Q96MK2 946 aa4.33□□□□□ -1.72
SRP54-212ENST00000556992 ANKRD27Q96NW4 1050 aa4.33□□□□□ -1.72
SRP54-212ENST00000556992 VPS35Q96QK1 796 aa4.33□□□□□ -1.72
SRP54-212ENST00000556992 ZNF382Q96SR6 550 aa4.33□□□□□ -1.72
SRP54-212ENST00000556992 SLC25A23Q9BV35 468 aa4.33□□□□□ -1.72
SRP54-212ENST00000556992 RIOK2Q9BVS4 552 aaKnown RBP4.33□□□□□ -1.72
SRP54-212ENST00000556992 TRMT61BQ9BVS5 477 aaKnown RBP4.33□□□□□ -1.72
SRP54-212ENST00000556992 TMEM245Q9H330 911 aa4.33□□□□□ -1.72
SRP54-212ENST00000556992 DENND2DQ9H6A0 471 aaPredicted RBP4.33□□□□□ -1.72
SRP54-212ENST00000556992 ZNF385DQ9H6B1 395 aa4.33□□□□□ -1.72
SRP54-212ENST00000556992 PARVBQ9HBI1 364 aa4.33□□□□□ -1.72
SRP54-212ENST00000556992 ZBTB26Q9HCK0 441 aa4.33□□□□□ -1.72
SRP54-212ENST00000556992 SEMA4BQ9NPR2 832 aaPredicted RBP4.33□□□□□ -1.72
SRP54-212ENST00000556992 USP36Q9P275 1121 aaKnown RBP4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms