RNA–Protein interactions for RNA: ENST00000556951.5

PSEN1-219, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-219ENST00000556951 TAS2R13Q9NYV9 303 aa12.15□□□□□ -0.46
PSEN1-219ENST00000556951 RUVBL2Q9Y230 463 aaKnown RBP12.15□□□□□ -0.46
PSEN1-219ENST00000556951 CDYLQ9Y232 598 aa12.15□□□□□ -0.46
PSEN1-219ENST00000556951 RPH3AQ9Y2J0 694 aaPredicted RBP12.15□□□□□ -0.46
PSEN1-219ENST00000556951 PADI2Q9Y2J8 665 aa12.15□□□□□ -0.46
PSEN1-219ENST00000556951 VPS13CQ709C8 3753 aa12.15□□□□□ -0.47
PSEN1-219ENST00000556951 MGAT4DA6NG13 374 aa12.14□□□□□ -0.47
PSEN1-219ENST00000556951 BIRC5O15392 142 aa12.14□□□□□ -0.47
PSEN1-219ENST00000556951 OR1I1O60431 355 aa12.14□□□□□ -0.47
PSEN1-219ENST00000556951 PLIN3O60664 434 aa12.14□□□□□ -0.47
PSEN1-219ENST00000556951 ALOX12BO75342 701 aa12.14□□□□□ -0.47
PSEN1-219ENST00000556951 JRKO75564 520 aa12.14□□□□□ -0.47
PSEN1-219ENST00000556951 KLHL2O95198 593 aa12.14□□□□□ -0.47
PSEN1-219ENST00000556951 WISP3O95389 354 aaPredicted RBP12.14□□□□□ -0.47
PSEN1-219ENST00000556951 PROCP04070 461 aa12.14□□□□□ -0.47
PSEN1-219ENST00000556951 HBQ1P09105 142 aa12.14□□□□□ -0.47
PSEN1-219ENST00000556951 FOSL1P15407 271 aa12.14□□□□□ -0.47
PSEN1-219ENST00000556951 HTR1EP28566 365 aa12.14□□□□□ -0.47
PSEN1-219ENST00000556951 PBLDP30039 288 aaPredicted RBP12.14□□□□□ -0.47
PSEN1-219ENST00000556951 FOLR3P41439 243 aa12.14□□□□□ -0.47
PSEN1-219ENST00000556951 SERPINB4P48594 390 aa12.14□□□□□ -0.47
PSEN1-219ENST00000556951 TDGF1P3P51864 188 aa12.14□□□□□ -0.47
PSEN1-219ENST00000556951 IRF9Q00978 393 aa12.14□□□□□ -0.47
PSEN1-219ENST00000556951 TIAL1Q01085 375 aaKnown RBP eCLIP12.14□□□□□ -0.47
PSEN1-219ENST00000556951 ZIC1Q15915 447 aa12.14□□□□□ -0.47
PSEN1-219ENST00000556951 TSNAXIP1Q2TAA8 658 aa12.14□□□□□ -0.47
PSEN1-219ENST00000556951 GPRC6AQ5T6X5 926 aa12.14□□□□□ -0.47
PSEN1-219ENST00000556951 C1orf189Q5VU69 101 aa12.14□□□□□ -0.47
PSEN1-219ENST00000556951 RHBDD2Q6NTF9 364 aa12.14□□□□□ -0.47
PSEN1-219ENST00000556951 UGT3A1Q6NUS8 523 aa12.14□□□□□ -0.47
PSEN1-219ENST00000556951 TBC1D1Q86TI0 1168 aaPredicted RBP12.14□□□□□ -0.47
PSEN1-219ENST00000556951 TRIM42Q8IWZ5 723 aa12.14□□□□□ -0.47
PSEN1-219ENST00000556951 PLD6Q8N2A8 252 aaKnown RBP12.14□□□□□ -0.47
PSEN1-219ENST00000556951 CATSPER1Q8NEC5 780 aa12.14□□□□□ -0.47
PSEN1-219ENST00000556951 ARMC2Q8NEN0 867 aa12.14□□□□□ -0.47
PSEN1-219ENST00000556951 HEXDCQ8WVB3 486 aa12.14□□□□□ -0.47
PSEN1-219ENST00000556951 C14orf79Q96F83 325 aa12.14□□□□□ -0.47
PSEN1-219ENST00000556951 COPS8Q99627 209 aa12.14□□□□□ -0.47
PSEN1-219ENST00000556951 NMRAL1Q9HBL8 299 aa12.14□□□□□ -0.47
PSEN1-219ENST00000556951 GPAMQ9HCL2 828 aa12.14□□□□□ -0.47
PSEN1-219ENST00000556951 SLC6A20Q9NP91 592 aa12.14□□□□□ -0.47
PSEN1-219ENST00000556951 DLL4Q9NR61 685 aa12.14□□□□□ -0.47
PSEN1-219ENST00000556951 TMEM216Q9P0N5 145 aa12.14□□□□□ -0.47
PSEN1-219ENST00000556951 GNPTGQ9UJJ9 305 aa12.14□□□□□ -0.47
PSEN1-219ENST00000556951 EMCNQ9ULC0 261 aa12.14□□□□□ -0.47
PSEN1-219ENST00000556951 ACSL5Q9ULC5 683 aa12.14□□□□□ -0.47
PSEN1-219ENST00000556951 PCM1Q15154 2024 aa12.13□□□□□ -0.47
PSEN1-219ENST00000556951 IGLV3-16A0A075B6K0 115 aa12.13□□□□□ -0.47
PSEN1-219ENST00000556951 BTN3A1O00481 513 aa12.13□□□□□ -0.47
PSEN1-219ENST00000556951 PCDH17O14917 1159 aa12.13□□□□□ -0.47
PSEN1-219ENST00000556951 VPS26AO75436 327 aa12.13□□□□□ -0.47
PSEN1-219ENST00000556951 LTA4HP09960 611 aaKnown RBP12.13□□□□□ -0.47
PSEN1-219ENST00000556951 NSG1P42857 185 aa12.13□□□□□ -0.47
PSEN1-219ENST00000556951 KCNK10P57789 538 aa12.13□□□□□ -0.47
PSEN1-219ENST00000556951 CDC16Q13042 620 aa12.13□□□□□ -0.47
PSEN1-219ENST00000556951 AIMP2Q13155 320 aaKnown RBP12.13□□□□□ -0.47
PSEN1-219ENST00000556951 PDAP1Q13442 181 aaKnown RBP12.13□□□□□ -0.47
PSEN1-219ENST00000556951 ZNF169Q14929 603 aaPredicted RBP12.13□□□□□ -0.47
PSEN1-219ENST00000556951 PDK4Q16654 411 aa12.13□□□□□ -0.47
PSEN1-219ENST00000556951 FAM83EQ2M2I3 478 aa12.13□□□□□ -0.47
PSEN1-219ENST00000556951 CTSL3PQ5NE16 218 aa12.13□□□□□ -0.47
PSEN1-219ENST00000556951 LDLRAP1Q5SW96 308 aa12.13□□□□□ -0.47
PSEN1-219ENST00000556951 B3GNTL1Q67FW5 361 aaPredicted RBP12.13□□□□□ -0.47
PSEN1-219ENST00000556951 PTRHD1Q6GMV3 140 aaKnown RBP12.13□□□□□ -0.47
PSEN1-219ENST00000556951 RPUSD3Q6P087 351 aaKnown RBP12.13□□□□□ -0.47
PSEN1-219ENST00000556951 BNC2Q6ZN30 1099 aaPredicted RBP12.13□□□□□ -0.47
PSEN1-219ENST00000556951 RGS9BPQ6ZS82 235 aa12.13□□□□□ -0.47
PSEN1-219ENST00000556951 ADGRF3Q8IZF5 1079 aa12.13□□□□□ -0.47
PSEN1-219ENST00000556951 OR2L2Q8NH16 312 aa12.13□□□□□ -0.47
PSEN1-219ENST00000556951 RDH11Q8TC12 318 aa12.13□□□□□ -0.47
PSEN1-219ENST00000556951 KCTD4Q8WVF5 259 aa12.13□□□□□ -0.47
PSEN1-219ENST00000556951 KCNJ9Q92806 393 aa12.13□□□□□ -0.47
PSEN1-219ENST00000556951 CHMP6Q96FZ7 201 aa12.13□□□□□ -0.47
PSEN1-219ENST00000556951 UBXN10Q96LJ8 280 aa12.13□□□□□ -0.47
PSEN1-219ENST00000556951 GPR78Q96P69 363 aa12.13□□□□□ -0.47
PSEN1-219ENST00000556951 MID2Q9UJV3 735 aa12.13□□□□□ -0.47
PSEN1-219ENST00000556951 WDR91A4D1P6 747 aa12.12□□□□□ -0.47
PSEN1-219ENST00000556951 CFAP99D6REC4 459 aa12.12□□□□□ -0.47
PSEN1-219ENST00000556951 F8W8V4 182 aa12.12□□□□□ -0.47
PSEN1-219ENST00000556951 SOCS6O14544 535 aa12.12□□□□□ -0.47
PSEN1-219ENST00000556951 KLHL18O94889 574 aa12.12□□□□□ -0.47
PSEN1-219ENST00000556951 BPGMP07738 259 aa12.12□□□□□ -0.47
PSEN1-219ENST00000556951 RBP1P09455 135 aa12.12□□□□□ -0.47
PSEN1-219ENST00000556951 CCDC166P0CW27 439 aa12.12□□□□□ -0.47
PSEN1-219ENST00000556951 NEFHP12036 1026 aa12.12□□□□□ -0.47
PSEN1-219ENST00000556951 CPA3P15088 417 aa12.12□□□□□ -0.47
PSEN1-219ENST00000556951 CHRM3P20309 590 aa12.12□□□□□ -0.47
PSEN1-219ENST00000556951 TAC1P20366 129 aa12.12□□□□□ -0.47
PSEN1-219ENST00000556951 ITGAXP20702 1163 aa12.12□□□□□ -0.47
PSEN1-219ENST00000556951 NDUFS1P28331 727 aa12.12□□□□□ -0.47
PSEN1-219ENST00000556951 GCGRP47871 477 aa12.12□□□□□ -0.47
PSEN1-219ENST00000556951 DCDP81605 110 aaKnown RBP12.12□□□□□ -0.47
PSEN1-219ENST00000556951 Q0VFX4 171 aa12.12□□□□□ -0.47
PSEN1-219ENST00000556951 ZNF460Q14592 562 aa12.12□□□□□ -0.47
PSEN1-219ENST00000556951 SLC9A5Q14940 896 aa12.12□□□□□ -0.47
PSEN1-219ENST00000556951 ACAP2Q15057 778 aa12.12□□□□□ -0.47
PSEN1-219ENST00000556951 PRAMEF13Q5VWM6 474 aa12.12□□□□□ -0.47
PSEN1-219ENST00000556951 KLC3Q6P597 504 aa12.12□□□□□ -0.47
PSEN1-219ENST00000556951 MRGPRGQ86SM5 289 aa12.12□□□□□ -0.47
PSEN1-219ENST00000556951 NUDCD3Q8IVD9 361 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms