RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 LIASO43766 372 aa11.18□□□□□ -0.62
ACTN1-221ENST00000556571 KIF5CO60282 957 aa11.18□□□□□ -0.62
ACTN1-221ENST00000556571 NME2P1O60361 137 aa11.18□□□□□ -0.62
ACTN1-221ENST00000556571 SLC25A12O75746 678 aa11.18□□□□□ -0.62
ACTN1-221ENST00000556571 CCDC175P0C221 793 aa11.18□□□□□ -0.62
ACTN1-221ENST00000556571 IGFBP2P18065 325 aa11.18□□□□□ -0.62
ACTN1-221ENST00000556571 IL10P22301 178 aa11.18□□□□□ -0.62
ACTN1-221ENST00000556571 NME2P22392 152 aa11.18□□□□□ -0.62
ACTN1-221ENST00000556571 ST13P50502 369 aaKnown RBP11.18□□□□□ -0.62
ACTN1-221ENST00000556571 ART1P52961 327 aa11.18□□□□□ -0.62
ACTN1-221ENST00000556571 SESN2P58004 480 aaPredicted RBP11.18□□□□□ -0.62
ACTN1-221ENST00000556571 RPS15AP62244 130 aaKnown RBP11.18□□□□□ -0.62
ACTN1-221ENST00000556571 SNRPNP63162 240 aaKnown RBP11.18□□□□□ -0.62
ACTN1-221ENST00000556571 OASLQ15646 514 aaKnown RBP11.18□□□□□ -0.62
ACTN1-221ENST00000556571 SFT2D3Q587I9 215 aa11.18□□□□□ -0.62
ACTN1-221ENST00000556571 ACSBG2Q5FVE4 666 aa11.18□□□□□ -0.62
ACTN1-221ENST00000556571 RNFT1Q5M7Z0 435 aa11.18□□□□□ -0.62
ACTN1-221ENST00000556571 THEMIS2Q5TEJ8 643 aa11.18□□□□□ -0.62
ACTN1-221ENST00000556571 MEI1Q5TIA1 1274 aa11.18□□□□□ -0.62
ACTN1-221ENST00000556571 TMEM211Q6ICI0 200 aa11.18□□□□□ -0.62
ACTN1-221ENST00000556571 PRSS41Q7RTY9 318 aa11.18□□□□□ -0.62
ACTN1-221ENST00000556571 VN1R4Q7Z5H5 301 aa11.18□□□□□ -0.62
ACTN1-221ENST00000556571 FGD2Q7Z6J4 655 aa11.18□□□□□ -0.62
ACTN1-221ENST00000556571 RPS19BP1Q86WX3 136 aaKnown RBP11.18□□□□□ -0.62
ACTN1-221ENST00000556571 LRRC8AQ8IWT6 810 aa11.18□□□□□ -0.62
ACTN1-221ENST00000556571 RNF10Q8N5U6 811 aaKnown RBP11.18□□□□□ -0.62
ACTN1-221ENST00000556571 FBXO15Q8NCQ5 510 aaPredicted RBP11.18□□□□□ -0.62
ACTN1-221ENST00000556571 PPFIBP2Q8ND30 876 aa11.18□□□□□ -0.62
ACTN1-221ENST00000556571 ASB5Q8WWX0 329 aa11.18□□□□□ -0.62
ACTN1-221ENST00000556571 FAM136AQ96C01 138 aa11.18□□□□□ -0.62
ACTN1-221ENST00000556571 THAP11Q96EK4 314 aa11.18□□□□□ -0.62
ACTN1-221ENST00000556571 PRAP1Q96NZ9 151 aa11.18□□□□□ -0.62
ACTN1-221ENST00000556571 CDCP1Q9H5V8 836 aa11.18□□□□□ -0.62
ACTN1-221ENST00000556571 ANKHQ9HCJ1 492 aa11.18□□□□□ -0.62
ACTN1-221ENST00000556571 ABCF3Q9NUQ8 709 aa11.18□□□□□ -0.62
ACTN1-221ENST00000556571 TMEM184CQ9NVA4 438 aa11.18□□□□□ -0.62
ACTN1-221ENST00000556571 BFARQ9NZS9 450 aa11.18□□□□□ -0.62
ACTN1-221ENST00000556571 PAK5Q9P286 719 aa11.18□□□□□ -0.62
ACTN1-221ENST00000556571 TNFRSF10DQ9UBN6 386 aa11.18□□□□□ -0.62
ACTN1-221ENST00000556571 GUCA1BQ9UMX6 200 aa11.18□□□□□ -0.62
ACTN1-221ENST00000556571 ZNF148Q9UQR1 794 aa11.18□□□□□ -0.62
ACTN1-221ENST00000556571 DRG1Q9Y295 367 aaKnown RBP11.18□□□□□ -0.62
ACTN1-221ENST00000556571 INTS1Q8N201 2190 aaKnown RBP11.18□□□□□ -0.62
ACTN1-221ENST00000556571 ACANP16112 2415 aa11.18□□□□□ -0.62
ACTN1-221ENST00000556571 E5RI56 91 aa11.17□□□□□ -0.62
ACTN1-221ENST00000556571 SGK494L7N484 410 aa11.17□□□□□ -0.62
ACTN1-221ENST00000556571 VAPBO95292 243 aa11.17□□□□□ -0.62
ACTN1-221ENST00000556571 NADKO95544 446 aaPredicted RBP11.17□□□□□ -0.62
ACTN1-221ENST00000556571 STATHP02808 62 aa11.17□□□□□ -0.62
ACTN1-221ENST00000556571 CD99P14209 185 aa11.17□□□□□ -0.62
ACTN1-221ENST00000556571 IL1RNP18510 177 aa11.17□□□□□ -0.62
ACTN1-221ENST00000556571 NMBRP28336 390 aa11.17□□□□□ -0.62
ACTN1-221ENST00000556571 PTGS2P35354 604 aa11.17□□□□□ -0.62
ACTN1-221ENST00000556571 NPY2RP49146 381 aa11.17□□□□□ -0.62
ACTN1-221ENST00000556571 CYB561P49447 251 aa11.17□□□□□ -0.62
ACTN1-221ENST00000556571 CRADDP78560 199 aa11.17□□□□□ -0.62
ACTN1-221ENST00000556571 USP10Q14694 798 aaKnown RBP11.17□□□□□ -0.62
ACTN1-221ENST00000556571 ABRAXAS2Q15018 415 aa11.17□□□□□ -0.62
ACTN1-221ENST00000556571 TYSND1Q2T9J0 566 aa11.17□□□□□ -0.62
ACTN1-221ENST00000556571 TMEM214Q6NUQ4 689 aaKnown RBP11.17□□□□□ -0.62
ACTN1-221ENST00000556571 REXO1L1PQ8IX06 675 aa11.17□□□□□ -0.62
ACTN1-221ENST00000556571 LRRC56Q8IYG6 542 aaPredicted RBP11.17□□□□□ -0.62
ACTN1-221ENST00000556571 SHISA5Q8N114 240 aa11.17□□□□□ -0.62
ACTN1-221ENST00000556571 CPSF7Q8N684 471 aaKnown RBP11.17□□□□□ -0.62
ACTN1-221ENST00000556571 CCDC89Q8N998 374 aa11.17□□□□□ -0.62
ACTN1-221ENST00000556571 POGLUT1Q8NBL1 392 aa11.17□□□□□ -0.62
ACTN1-221ENST00000556571 CAMKVQ8NCB2 501 aa11.17□□□□□ -0.62
ACTN1-221ENST00000556571 LILRB4Q8NHJ6 448 aa11.17□□□□□ -0.62
ACTN1-221ENST00000556571 FAM57AQ8TBR7 257 aa11.17□□□□□ -0.62
ACTN1-221ENST00000556571 ELP5Q8TE02 316 aa11.17□□□□□ -0.62
ACTN1-221ENST00000556571 TMEM125Q96AQ2 219 aa11.17□□□□□ -0.62
ACTN1-221ENST00000556571 FAM129AQ9BZQ8 928 aa11.17□□□□□ -0.62
ACTN1-221ENST00000556571 TRIM45Q9H8W5 580 aaPredicted RBP11.17□□□□□ -0.62
ACTN1-221ENST00000556571 EIF2B3Q9NR50 452 aaKnown RBP11.17□□□□□ -0.62
ACTN1-221ENST00000556571 GALPQ9UBC7 116 aa11.17□□□□□ -0.62
ACTN1-221ENST00000556571 PACSIN2Q9UNF0 486 aaPredicted RBP11.17□□□□□ -0.62
ACTN1-221ENST00000556571 CRYL1Q9Y2S2 319 aa11.17□□□□□ -0.62
ACTN1-221ENST00000556571 AKAP6Q13023 2319 aa11.17□□□□□ -0.62
ACTN1-221ENST00000556571 FAM221AA4D161 298 aa11.16□□□□□ -0.62
ACTN1-221ENST00000556571 MAGEB17A8MXT2 336 aa11.16□□□□□ -0.62
ACTN1-221ENST00000556571 ZBTB14O43829 449 aa11.16□□□□□ -0.62
ACTN1-221ENST00000556571 SYF2O95926 243 aaKnown RBP11.16□□□□□ -0.62
ACTN1-221ENST00000556571 FTCDO95954 541 aa11.16□□□□□ -0.62
ACTN1-221ENST00000556571 ETS1P14921 441 aa11.16□□□□□ -0.62
ACTN1-221ENST00000556571 ARNTP27540 789 aa11.16□□□□□ -0.62
ACTN1-221ENST00000556571 CHRNB4P30926 498 aa11.16□□□□□ -0.62
ACTN1-221ENST00000556571 PTGER1P34995 402 aa11.16□□□□□ -0.62
ACTN1-221ENST00000556571 OR4D2P58180 307 aa11.16□□□□□ -0.62
ACTN1-221ENST00000556571 SLC26A5P58743 744 aa11.16□□□□□ -0.62
ACTN1-221ENST00000556571 MPP1Q00013 466 aa11.16□□□□□ -0.62
ACTN1-221ENST00000556571 RHAGQ02094 409 aa11.16□□□□□ -0.62
ACTN1-221ENST00000556571 KCNJ11Q14654 390 aa11.16□□□□□ -0.62
ACTN1-221ENST00000556571 TTLL9Q3SXZ7 439 aa11.16□□□□□ -0.62
ACTN1-221ENST00000556571 ZNF468Q5VIY5 522 aaPredicted RBP11.16□□□□□ -0.62
ACTN1-221ENST00000556571 CEP128Q6ZU80 1094 aa11.16□□□□□ -0.62
ACTN1-221ENST00000556571 PRUNE1Q86TP1 453 aa11.16□□□□□ -0.62
ACTN1-221ENST00000556571 ASB11Q8WXH4 323 aa11.16□□□□□ -0.62
ACTN1-221ENST00000556571 TM4SF19Q96DZ7 209 aa11.16□□□□□ -0.62
ACTN1-221ENST00000556571 OR1F2PQ96R84 312 aa11.16□□□□□ -0.62
ACTN1-221ENST00000556571 MACROD1Q9BQ69 325 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms