RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 SEC24DO94855 1032 aaPredicted RBP21.35■■□□□ 1.01
ACTN1-220ENST00000556433 CYC1P08574 325 aa21.35■■□□□ 1.01
ACTN1-220ENST00000556433 PER3P56645 1201 aa21.35■■□□□ 1.01
ACTN1-220ENST00000556433 PDAP1Q13442 181 aaKnown RBP21.35■■□□□ 1.01
ACTN1-220ENST00000556433 HP1BP3Q5SSJ5 553 aaPredicted RBP21.35■■□□□ 1.01
ACTN1-220ENST00000556433 TEDDM1Q5T9Z0 273 aa21.35■■□□□ 1.01
ACTN1-220ENST00000556433 HIBCHQ6NVY1 386 aaPredicted RBP21.35■■□□□ 1.01
ACTN1-220ENST00000556433 LANCL3Q6ZV70 420 aa21.35■■□□□ 1.01
ACTN1-220ENST00000556433 GPATCH11Q8N954 259 aa21.35■■□□□ 1.01
ACTN1-220ENST00000556433 MFSD9Q8NBP5 474 aa21.35■■□□□ 1.01
ACTN1-220ENST00000556433 SLCO2A1Q92959 643 aa21.35■■□□□ 1.01
ACTN1-220ENST00000556433 HAUS8Q9BT25 410 aa21.35■■□□□ 1.01
ACTN1-220ENST00000556433 TRIM54Q9BYV2 358 aa21.35■■□□□ 1.01
ACTN1-220ENST00000556433 ARL15Q9NXU5 204 aa21.35■■□□□ 1.01
ACTN1-220ENST00000556433 TEKT2Q9UIF3 430 aa21.35■■□□□ 1.01
ACTN1-220ENST00000556433 DIDO1Q9BTC0 2240 aaKnown RBP21.35■■□□□ 1.01
ACTN1-220ENST00000556433 CACNA1DQ01668 2161 aa21.34■■□□□ 1.01
ACTN1-220ENST00000556433 TSPAN12O95859 305 aa21.34■■□□□ 1.01
ACTN1-220ENST00000556433 IVDP26440 423 aa21.34■■□□□ 1.01
ACTN1-220ENST00000556433 DCTP40126 519 aa21.34■■□□□ 1.01
ACTN1-220ENST00000556433 PGGT1BP53609 377 aa21.34■■□□□ 1.01
ACTN1-220ENST00000556433 ZNF33BQ06732 778 aa21.34■■□□□ 1.01
ACTN1-220ENST00000556433 INAQ16352 499 aa21.34■■□□□ 1.01
ACTN1-220ENST00000556433 ZXDCQ2QGD7 858 aaPredicted RBP21.34■■□□□ 1.01
ACTN1-220ENST00000556433 HECTD2Q5U5R9 776 aa21.34■■□□□ 1.01
ACTN1-220ENST00000556433 DUPD1Q68J44 220 aa21.34■■□□□ 1.01
ACTN1-220ENST00000556433 ZNF324BQ6AW86 544 aaPredicted RBP21.34■■□□□ 1.01
ACTN1-220ENST00000556433 GALNT7Q86SF2 657 aa21.34■■□□□ 1.01
ACTN1-220ENST00000556433 PDIK1LQ8N165 341 aa21.34■■□□□ 1.01
ACTN1-220ENST00000556433 SUN3Q8TAQ9 357 aa21.34■■□□□ 1.01
ACTN1-220ENST00000556433 PYCR2Q96C36 320 aa21.34■■□□□ 1.01
ACTN1-220ENST00000556433 CFAP36Q96G28 342 aa21.34■■□□□ 1.01
ACTN1-220ENST00000556433 SNF8Q96H20 258 aa21.34■■□□□ 1.01
ACTN1-220ENST00000556433 RNF32Q9H0A6 362 aa21.34■■□□□ 1.01
ACTN1-220ENST00000556433 PLAC1Q9HBJ0 212 aa21.34■■□□□ 1.01
ACTN1-220ENST00000556433 VWA7Q9Y334 891 aa21.34■■□□□ 1.01
ACTN1-220ENST00000556433 NAALAD2Q9Y3Q0 740 aa21.34■■□□□ 1.01
ACTN1-220ENST00000556433 SCN3AQ9NY46 2000 aa21.33■■□□□ 1.01
ACTN1-220ENST00000556433 RDH16O75452 317 aa21.33■■□□□ 1.01
ACTN1-220ENST00000556433 SLC35G6P0C7Q6 338 aa21.33■■□□□ 1.01
ACTN1-220ENST00000556433 MYBL2P10244 700 aa21.33■■□□□ 1.01
ACTN1-220ENST00000556433 ELK3P41970 407 aa21.33■■□□□ 1.01
ACTN1-220ENST00000556433 CCR8P51685 355 aa21.33■■□□□ 1.01
ACTN1-220ENST00000556433 BTBD16Q32M84 506 aa21.33■■□□□ 1.01
ACTN1-220ENST00000556433 ANKRD37Q7Z713 158 aa21.33■■□□□ 1.01
ACTN1-220ENST00000556433 PDSS2Q86YH6 399 aa21.33■■□□□ 1.01
ACTN1-220ENST00000556433 ABHD11Q8NFV4 315 aa21.33■■□□□ 1.01
ACTN1-220ENST00000556433 OR56A3Q8NH54 315 aa21.33■■□□□ 1.01
ACTN1-220ENST00000556433 NR4A3Q92570 626 aa21.33■■□□□ 1.01
ACTN1-220ENST00000556433 PWWP2AQ96N64 755 aa21.33■■□□□ 1.01
ACTN1-220ENST00000556433 SLC22A7Q9Y694 548 aa21.33■■□□□ 1.01
ACTN1-220ENST00000556433 OR5H15A6NDH6 313 aa21.32■■□□□ 1
ACTN1-220ENST00000556433 OR1F1O43749 312 aa21.32■■□□□ 1
ACTN1-220ENST00000556433 STSP08842 583 aa21.32■■□□□ 1
ACTN1-220ENST00000556433 TCP1P17987 556 aaKnown RBP21.32■■□□□ 1
ACTN1-220ENST00000556433 AGTR2P50052 363 aa21.32■■□□□ 1
ACTN1-220ENST00000556433 AP1S2P56377 157 aa21.32■■□□□ 1
ACTN1-220ENST00000556433 KCNK10P57789 538 aa21.32■■□□□ 1
ACTN1-220ENST00000556433 MEF2AQ02078 507 aaPredicted RBP21.32■■□□□ 1
ACTN1-220ENST00000556433 MORF4L2Q15014 288 aa21.32■■□□□ 1
ACTN1-220ENST00000556433 PLAG1Q6DJT9 500 aa21.32■■□□□ 1
ACTN1-220ENST00000556433 PEX11GQ96HA9 241 aa21.32■■□□□ 1
ACTN1-220ENST00000556433 CHMP2BQ9UQN3 213 aa21.32■■□□□ 1
ACTN1-220ENST00000556433 TEX15Q9BXT5 2789 aa21.32■■□□□ 1
ACTN1-220ENST00000556433 A0A1B0GUH1 482 aa21.31■■□□□ 1
ACTN1-220ENST00000556433 PRAMEF2O60811 474 aa21.31■■□□□ 1
ACTN1-220ENST00000556433 RASAL1O95294 804 aa21.31■■□□□ 1
ACTN1-220ENST00000556433 GUCA1CO95843 209 aa21.31■■□□□ 1
ACTN1-220ENST00000556433 TDGF1P3P51864 188 aa21.31■■□□□ 1
ACTN1-220ENST00000556433 FAM45BPQ6NSW5 357 aa21.31■■□□□ 1
ACTN1-220ENST00000556433 TRMT10BQ6PF06 316 aaKnown RBP21.31■■□□□ 1
ACTN1-220ENST00000556433 KLHL7Q8IXQ5 586 aa21.31■■□□□ 1
ACTN1-220ENST00000556433 OR4K1Q8NGD4 311 aa21.31■■□□□ 1
ACTN1-220ENST00000556433 FAM45AQ8TCE6 357 aa21.31■■□□□ 1
ACTN1-220ENST00000556433 ATL1Q8WXF7 558 aa21.31■■□□□ 1
ACTN1-220ENST00000556433 FBXL8Q96CD0 374 aa21.31■■□□□ 1
ACTN1-220ENST00000556433 MOCOSQ96EN8 888 aa21.31■■□□□ 1
ACTN1-220ENST00000556433 ZNF354BQ96LW1 612 aa21.31■■□□□ 1
ACTN1-220ENST00000556433 OR4K3Q96R72 315 aa21.31■■□□□ 1
ACTN1-220ENST00000556433 OLFM1Q99784 485 aa21.31■■□□□ 1
ACTN1-220ENST00000556433 KCNK13Q9HB14 408 aa21.31■■□□□ 1
ACTN1-220ENST00000556433 CORO1CQ9ULV4 474 aaPredicted RBP21.31■■□□□ 1
ACTN1-220ENST00000556433 ZNF860A6NHJ4 632 aa21.3■■□□□ 1
ACTN1-220ENST00000556433 NDUFS4O43181 175 aa21.3■■□□□ 1
ACTN1-220ENST00000556433 CRYABP02511 175 aaKnown RBP21.3■■□□□ 1
ACTN1-220ENST00000556433 SERPIND1P05546 499 aa21.3■■□□□ 1
ACTN1-220ENST00000556433 IL10P22301 178 aa21.3■■□□□ 1
ACTN1-220ENST00000556433 ACTN3Q08043 901 aaPredicted RBP21.3■■□□□ 1
ACTN1-220ENST00000556433 CSHL1Q14406 222 aa21.3■■□□□ 1
ACTN1-220ENST00000556433 HERC3Q15034 1050 aa21.3■■□□□ 1
ACTN1-220ENST00000556433 ZRSR2Q15696 482 aaKnown RBP21.3■■□□□ 1
ACTN1-220ENST00000556433 NSDHLQ15738 373 aa21.3■■□□□ 1
ACTN1-220ENST00000556433 CATSPEREQ5SY80 951 aa21.3■■□□□ 1
ACTN1-220ENST00000556433 C1QL3Q5VWW1 255 aa21.3■■□□□ 1
ACTN1-220ENST00000556433 FCRLBQ6BAA4 426 aa21.3■■□□□ 1
ACTN1-220ENST00000556433 GFRALQ6UXV0 394 aa21.3■■□□□ 1
ACTN1-220ENST00000556433 SYDE1Q6ZW31 735 aaPredicted RBP21.3■■□□□ 1
ACTN1-220ENST00000556433 FJX1Q86VR8 437 aa21.3■■□□□ 1
ACTN1-220ENST00000556433 TBC1D19Q8N5T2 526 aa21.3■■□□□ 1
ACTN1-220ENST00000556433 PLPP5Q8NEB5 264 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms