RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 CAVIN1Q6NZI2 390 aaKnown RBP13.08□□□□□ -0.32
ACTN1-219ENST00000556432 ARHGAP11AQ6P4F7 1023 aa13.08□□□□□ -0.32
ACTN1-219ENST00000556432 BIVMQ86UB2 503 aa13.08□□□□□ -0.32
ACTN1-219ENST00000556432 SHISA5Q8N114 240 aa13.08□□□□□ -0.32
ACTN1-219ENST00000556432 PPFIBP2Q8ND30 876 aa13.08□□□□□ -0.32
ACTN1-219ENST00000556432 GOT1L1Q8NHS2 421 aaPredicted RBP13.08□□□□□ -0.32
ACTN1-219ENST00000556432 ZCCHC10Q8TBK6 192 aa13.08□□□□□ -0.32
ACTN1-219ENST00000556432 ZNF778Q96MU6 729 aa13.08□□□□□ -0.32
ACTN1-219ENST00000556432 GPATCH1Q9BRR8 931 aaKnown RBP13.08□□□□□ -0.32
ACTN1-219ENST00000556432 REPIN1Q9BWE0 567 aaKnown RBP13.08□□□□□ -0.32
ACTN1-219ENST00000556432 SLC6A16Q9GZN6 736 aa13.08□□□□□ -0.32
ACTN1-219ENST00000556432 CLEC4MQ9H2X3 399 aaPredicted RBP13.08□□□□□ -0.32
ACTN1-219ENST00000556432 FAM114A2Q9NRY5 505 aa13.08□□□□□ -0.32
ACTN1-219ENST00000556432 MARCH4Q9P2E8 410 aaPredicted RBP13.08□□□□□ -0.32
ACTN1-219ENST00000556432 EFR3BQ9Y2G0 817 aa13.08□□□□□ -0.32
ACTN1-219ENST00000556432 ZNF469Q96JG9 3925 aaPredicted RBP13.07□□□□□ -0.32
ACTN1-219ENST00000556432 ARHGEF33A8MVX0 844 aa13.07□□□□□ -0.32
ACTN1-219ENST00000556432 KLRC4-KLRK1H3BQV0 150 aa13.07□□□□□ -0.32
ACTN1-219ENST00000556432 SMAPO00193 183 aa13.07□□□□□ -0.32
ACTN1-219ENST00000556432 KLK8O60259 260 aa13.07□□□□□ -0.32
ACTN1-219ENST00000556432 RDH16O75452 317 aa13.07□□□□□ -0.32
ACTN1-219ENST00000556432 CTNNA1P35221 906 aaKnown RBP13.07□□□□□ -0.32
ACTN1-219ENST00000556432 PNLIPRP1P54315 467 aa13.07□□□□□ -0.32
ACTN1-219ENST00000556432 HADHBP55084 474 aaKnown RBP13.07□□□□□ -0.32
ACTN1-219ENST00000556432 SLC26A5P58743 744 aa13.07□□□□□ -0.32
ACTN1-219ENST00000556432 CMPK2Q5EBM0 449 aa13.07□□□□□ -0.32
ACTN1-219ENST00000556432 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.07□□□□□ -0.32
ACTN1-219ENST00000556432 SULF2Q8IWU5 870 aa13.07□□□□□ -0.32
ACTN1-219ENST00000556432 CYP4X1Q8N118 509 aa13.07□□□□□ -0.32
ACTN1-219ENST00000556432 TSLPQ969D9 159 aa13.07□□□□□ -0.32
ACTN1-219ENST00000556432 ALPK1Q96QP1 1244 aa13.07□□□□□ -0.32
ACTN1-219ENST00000556432 EBNA1BP2Q99848 306 aaKnown RBP13.07□□□□□ -0.32
ACTN1-219ENST00000556432 SMR3AQ99954 134 aa13.07□□□□□ -0.32
ACTN1-219ENST00000556432 MACROD1Q9BQ69 325 aa13.07□□□□□ -0.32
ACTN1-219ENST00000556432 ANKHQ9HCJ1 492 aa13.07□□□□□ -0.32
ACTN1-219ENST00000556432 ZNF358Q9NW07 568 aa13.07□□□□□ -0.32
ACTN1-219ENST00000556432 HEATR5BQ9P2D3 2071 aa13.07□□□□□ -0.32
ACTN1-219ENST00000556432 NSD1Q96L73 2696 aaPredicted RBP13.06□□□□□ -0.32
ACTN1-219ENST00000556432 GOLGA6L9A6NEM1 432 aa13.06□□□□□ -0.32
ACTN1-219ENST00000556432 E7EVH7 732 aa13.06□□□□□ -0.32
ACTN1-219ENST00000556432 H7BY64 318 aa13.06□□□□□ -0.32
ACTN1-219ENST00000556432 FCHO1O14526 889 aa13.06□□□□□ -0.32
ACTN1-219ENST00000556432 CD3EAPO15446 510 aaKnown RBP13.06□□□□□ -0.32
ACTN1-219ENST00000556432 PROM1O43490 865 aa13.06□□□□□ -0.32
ACTN1-219ENST00000556432 PEX1O43933 1283 aa13.06□□□□□ -0.32
ACTN1-219ENST00000556432 SYF2O95926 243 aaKnown RBP13.06□□□□□ -0.32
ACTN1-219ENST00000556432 CATP04040 527 aaKnown RBP13.06□□□□□ -0.32
ACTN1-219ENST00000556432 ERGP11308 486 aa13.06□□□□□ -0.32
ACTN1-219ENST00000556432 ADRA1DP25100 572 aa13.06□□□□□ -0.32
ACTN1-219ENST00000556432 ADSLP30566 484 aaPredicted RBP13.06□□□□□ -0.32
ACTN1-219ENST00000556432 PTPN7P35236 360 aa13.06□□□□□ -0.32
ACTN1-219ENST00000556432 BCL6P41182 706 aa13.06□□□□□ -0.32
ACTN1-219ENST00000556432 MAGEA1P43355 309 aa13.06□□□□□ -0.32
ACTN1-219ENST00000556432 HLCSP50747 726 aa13.06□□□□□ -0.32
ACTN1-219ENST00000556432 GPR85P60893 370 aa13.06□□□□□ -0.32
ACTN1-219ENST00000556432 ADAM8P78325 824 aa13.06□□□□□ -0.32
ACTN1-219ENST00000556432 ARHGAP19Q14CB8 494 aa13.06□□□□□ -0.32
ACTN1-219ENST00000556432 SKOR2Q2VWA4 1001 aaPredicted RBP13.06□□□□□ -0.32
ACTN1-219ENST00000556432 AADACL2Q6P093 401 aa13.06□□□□□ -0.32
ACTN1-219ENST00000556432 LRRC6Q86X45 466 aa13.06□□□□□ -0.32
ACTN1-219ENST00000556432 PPHLN1Q8NEY8 458 aaKnown RBP13.06□□□□□ -0.32
ACTN1-219ENST00000556432 OR5M9Q8NGP3 310 aa13.06□□□□□ -0.32
ACTN1-219ENST00000556432 PEX11GQ96HA9 241 aa13.06□□□□□ -0.32
ACTN1-219ENST00000556432 PRAP1Q96NZ9 151 aa13.06□□□□□ -0.32
ACTN1-219ENST00000556432 DEFB127Q9H1M4 99 aa13.06□□□□□ -0.32
ACTN1-219ENST00000556432 RIMKLBQ9ULI2 386 aa13.06□□□□□ -0.32
ACTN1-219ENST00000556432 L3MBTL1Q9Y468 752 aa13.06□□□□□ -0.32
ACTN1-219ENST00000556432 TCAF1Q9Y4C2 921 aa13.06□□□□□ -0.32
ACTN1-219ENST00000556432 DUSP10Q9Y6W6 482 aa13.06□□□□□ -0.32
ACTN1-219ENST00000556432 ZNF860A6NHJ4 632 aa13.05□□□□□ -0.32
ACTN1-219ENST00000556432 NPIPA2E9PIF3 369 aa13.05□□□□□ -0.32
ACTN1-219ENST00000556432 NPIPA3F8WFD2 350 aa13.05□□□□□ -0.32
ACTN1-219ENST00000556432 MYO1CO00159 1063 aa13.05□□□□□ -0.32
ACTN1-219ENST00000556432 MFAP3LO75121 409 aa13.05□□□□□ -0.32
ACTN1-219ENST00000556432 MATN4O95460 622 aa13.05□□□□□ -0.32
ACTN1-219ENST00000556432 SLC16A8O95907 504 aa13.05□□□□□ -0.32
ACTN1-219ENST00000556432 HSD17B2P37059 387 aa13.05□□□□□ -0.32
ACTN1-219ENST00000556432 GDF10P55107 478 aa13.05□□□□□ -0.32
ACTN1-219ENST00000556432 RWDD2BP57060 319 aa13.05□□□□□ -0.32
ACTN1-219ENST00000556432 MLF1P58340 268 aa13.05□□□□□ -0.32
ACTN1-219ENST00000556432 ABATP80404 500 aa13.05□□□□□ -0.32
ACTN1-219ENST00000556432 RHAGQ02094 409 aa13.05□□□□□ -0.32
ACTN1-219ENST00000556432 RELAQ04206 551 aa13.05□□□□□ -0.32
ACTN1-219ENST00000556432 ACVR1Q04771 509 aa13.05□□□□□ -0.32
ACTN1-219ENST00000556432 SNTB1Q13884 538 aaKnown RBP13.05□□□□□ -0.32
ACTN1-219ENST00000556432 FBXW10Q5XX13 1052 aa13.05□□□□□ -0.32
ACTN1-219ENST00000556432 PAOXQ6QHF9 649 aa13.05□□□□□ -0.32
ACTN1-219ENST00000556432 ARSKQ6UWY0 536 aa13.05□□□□□ -0.32
ACTN1-219ENST00000556432 ZNF227Q86WZ6 799 aa13.05□□□□□ -0.32
ACTN1-219ENST00000556432 ACRBPQ8NEB7 543 aa13.05□□□□□ -0.32
ACTN1-219ENST00000556432 OR52N2Q8NGI0 321 aa13.05□□□□□ -0.32
ACTN1-219ENST00000556432 PKP4Q99569 1192 aa13.05□□□□□ -0.32
ACTN1-219ENST00000556432 P2RY12Q9H244 342 aa13.05□□□□□ -0.32
ACTN1-219ENST00000556432 PCDHA3Q9Y5H8 950 aa13.05□□□□□ -0.32
ACTN1-219ENST00000556432 DNAJC13O75165 2243 aa13.05□□□□□ -0.32
ACTN1-219ENST00000556432 ERI2A8K979 691 aaKnown RBP13.04□□□□□ -0.32
ACTN1-219ENST00000556432 MAGEB17A8MXT2 336 aa13.04□□□□□ -0.32
ACTN1-219ENST00000556432 CDK2AP1O14519 115 aa13.04□□□□□ -0.32
ACTN1-219ENST00000556432 NIPSNAP2O75323 286 aa13.04□□□□□ -0.32
ACTN1-219ENST00000556432 CHRM3P20309 590 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms