RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 STT3BQ8TCJ2 826 aa10.96□□□□□ -0.65
SLIRP-205ENST00000556310 TM4SF19Q96DZ7 209 aa10.96□□□□□ -0.65
SLIRP-205ENST00000556310 TSNARE1Q96NA8 513 aa10.96□□□□□ -0.65
SLIRP-205ENST00000556310 TMEM79Q9BSE2 394 aa10.96□□□□□ -0.65
SLIRP-205ENST00000556310 SOX17Q9H6I2 414 aaPredicted RBP10.96□□□□□ -0.65
SLIRP-205ENST00000556310 CNOT10Q9H9A5 744 aaKnown RBP10.96□□□□□ -0.65
SLIRP-205ENST00000556310 NMRAL1Q9HBL8 299 aa10.96□□□□□ -0.65
SLIRP-205ENST00000556310 C14orf105Q9NVL8 296 aa10.96□□□□□ -0.65
SLIRP-205ENST00000556310 P4HTMQ9NXG6 502 aa10.96□□□□□ -0.65
SLIRP-205ENST00000556310 WWOXQ9NZC7 414 aa10.96□□□□□ -0.65
SLIRP-205ENST00000556310 RNF112Q9ULX5 631 aa10.96□□□□□ -0.65
SLIRP-205ENST00000556310 SLC22A14Q9Y267 594 aa10.96□□□□□ -0.65
SLIRP-205ENST00000556310 TP53TG5Q9Y2B4 290 aa10.96□□□□□ -0.65
SLIRP-205ENST00000556310 MAP4K5Q9Y4K4 846 aa10.96□□□□□ -0.65
SLIRP-205ENST00000556310 PCDHGA9Q9Y5G4 932 aaKnown RBP10.96□□□□□ -0.65
SLIRP-205ENST00000556310 HEMK1Q9Y5R4 338 aaPredicted RBP10.96□□□□□ -0.65
SLIRP-205ENST00000556310 A0A087X1B8 175 aa10.95□□□□□ -0.66
SLIRP-205ENST00000556310 A0A0A6YYC8 382 aaPredicted RBP10.95□□□□□ -0.66
SLIRP-205ENST00000556310 HMX2A2RU54 273 aa10.95□□□□□ -0.66
SLIRP-205ENST00000556310 H0YIG0 161 aa10.95□□□□□ -0.66
SLIRP-205ENST00000556310 I3L1I5 382 aaPredicted RBP10.95□□□□□ -0.66
SLIRP-205ENST00000556310 OR1F1O43749 312 aa10.95□□□□□ -0.66
SLIRP-205ENST00000556310 LCMT2O60294 686 aaKnown RBP10.95□□□□□ -0.66
SLIRP-205ENST00000556310 KERAO60938 352 aa10.95□□□□□ -0.66
SLIRP-205ENST00000556310 CEACAM4O75871 244 aa10.95□□□□□ -0.66
SLIRP-205ENST00000556310 WDR47O94967 919 aa10.95□□□□□ -0.66
SLIRP-205ENST00000556310 NSA2O95478 260 aaKnown RBP10.95□□□□□ -0.66
SLIRP-205ENST00000556310 STATHP02808 62 aa10.95□□□□□ -0.66
SLIRP-205ENST00000556310 S100BP04271 92 aaPredicted RBP10.95□□□□□ -0.66
SLIRP-205ENST00000556310 INHBAP08476 426 aa10.95□□□□□ -0.66
SLIRP-205ENST00000556310 LTA4HP09960 611 aaKnown RBP10.95□□□□□ -0.66
SLIRP-205ENST00000556310 ZGLP1P0C6A0 271 aa10.95□□□□□ -0.66
SLIRP-205ENST00000556310 GNAZP19086 355 aa10.95□□□□□ -0.66
SLIRP-205ENST00000556310 TFEBP19484 476 aa10.95□□□□□ -0.66
SLIRP-205ENST00000556310 GGT5P36269 586 aa10.95□□□□□ -0.66
SLIRP-205ENST00000556310 SCTRP47872 440 aa10.95□□□□□ -0.66
SLIRP-205ENST00000556310 AVPR1BP47901 424 aa10.95□□□□□ -0.66
SLIRP-205ENST00000556310 SERPINB8P50452 374 aa10.95□□□□□ -0.66
SLIRP-205ENST00000556310 MEF2AQ02078 507 aaPredicted RBP10.95□□□□□ -0.66
SLIRP-205ENST00000556310 DLG1Q12959 904 aa10.95□□□□□ -0.66
SLIRP-205ENST00000556310 CDC16Q13042 620 aa10.95□□□□□ -0.66
SLIRP-205ENST00000556310 MROH9Q5TGP6 573 aa10.95□□□□□ -0.66
SLIRP-205ENST00000556310 SULT1C3Q6IMI6 304 aa10.95□□□□□ -0.66
SLIRP-205ENST00000556310 NXPE4Q6UWF7 544 aa10.95□□□□□ -0.66
SLIRP-205ENST00000556310 SHISA6Q6ZSJ9 500 aa10.95□□□□□ -0.66
SLIRP-205ENST00000556310 TAOK1Q7L7X3 1001 aa10.95□□□□□ -0.66
SLIRP-205ENST00000556310 ZNF605Q86T29 641 aa10.95□□□□□ -0.66
SLIRP-205ENST00000556310 CENPLQ8N0S6 344 aaPredicted RBP10.95□□□□□ -0.66
SLIRP-205ENST00000556310 STAG3L4Q8TBR4 150 aa10.95□□□□□ -0.66
SLIRP-205ENST00000556310 SLC44A1Q8WWI5 657 aa10.95□□□□□ -0.66
SLIRP-205ENST00000556310 SLC13A3Q8WWT9 602 aa10.95□□□□□ -0.66
SLIRP-205ENST00000556310 MIEF2Q96C03 454 aa10.95□□□□□ -0.66
SLIRP-205ENST00000556310 MRRFQ96E11 262 aaKnown RBP10.95□□□□□ -0.66
SLIRP-205ENST00000556310 MMABQ96EY8 250 aaPredicted RBP10.95□□□□□ -0.66
SLIRP-205ENST00000556310 FER1L6-AS2Q96M78 137 aa10.95□□□□□ -0.66
SLIRP-205ENST00000556310 AIF1LQ9BQI0 150 aa10.95□□□□□ -0.66
SLIRP-205ENST00000556310 CRB3Q9BUF7 120 aa10.95□□□□□ -0.66
SLIRP-205ENST00000556310 SLC25A23Q9BV35 468 aa10.95□□□□□ -0.66
SLIRP-205ENST00000556310 SPNS1Q9H2V7 528 aa10.95□□□□□ -0.66
SLIRP-205ENST00000556310 ALG9Q9H6U8 611 aa10.95□□□□□ -0.66
SLIRP-205ENST00000556310 L2HGDHQ9H9P8 463 aa10.95□□□□□ -0.66
SLIRP-205ENST00000556310 MKKSQ9NPJ1 570 aaPredicted RBP10.95□□□□□ -0.66
SLIRP-205ENST00000556310 ZNF71Q9NQZ8 489 aaPredicted RBP10.95□□□□□ -0.66
SLIRP-205ENST00000556310 SNX15Q9NRS6 342 aa10.95□□□□□ -0.66
SLIRP-205ENST00000556310 SEMA3GQ9NS98 782 aa10.95□□□□□ -0.66
SLIRP-205ENST00000556310 IGSF5Q9NSI5 407 aa10.95□□□□□ -0.66
SLIRP-205ENST00000556310 NUDT4Q9NZJ9 180 aa10.95□□□□□ -0.66
SLIRP-205ENST00000556310 CD274Q9NZQ7 290 aa10.95□□□□□ -0.66
SLIRP-205ENST00000556310 TRPC4Q9UBN4 977 aa10.95□□□□□ -0.66
SLIRP-205ENST00000556310 NFU1Q9UMS0 254 aa10.95□□□□□ -0.66
SLIRP-205ENST00000556310 G3BP2Q9UN86 482 aaKnown RBP10.95□□□□□ -0.66
SLIRP-205ENST00000556310 ACOT9Q9Y305 439 aa10.95□□□□□ -0.66
SLIRP-205ENST00000556310 MRPS2Q9Y399 296 aaKnown RBP10.95□□□□□ -0.66
SLIRP-205ENST00000556310 HS3ST3B1Q9Y662 390 aa10.95□□□□□ -0.66
SLIRP-205ENST00000556310 SCN3AQ9NY46 2000 aa10.95□□□□□ -0.66
SLIRP-205ENST00000556310 DOCK10Q96BY6 2186 aa10.94□□□□□ -0.66
SLIRP-205ENST00000556310 A0A087WUV0 522 aaPredicted RBP10.94□□□□□ -0.66
SLIRP-205ENST00000556310 CCDC189A1A4V9 331 aa10.94□□□□□ -0.66
SLIRP-205ENST00000556310 AGPSO00116 658 aa10.94□□□□□ -0.66
SLIRP-205ENST00000556310 SOCS6O14544 535 aa10.94□□□□□ -0.66
SLIRP-205ENST00000556310 TAPBPO15533 448 aa10.94□□□□□ -0.66
SLIRP-205ENST00000556310 NDUFS4O43181 175 aa10.94□□□□□ -0.66
SLIRP-205ENST00000556310 ALDOAP04075 364 aaKnown RBP10.94□□□□□ -0.66
SLIRP-205ENST00000556310 C2P06681 752 aa10.94□□□□□ -0.66
SLIRP-205ENST00000556310 ABHD2P08910 425 aa10.94□□□□□ -0.66
SLIRP-205ENST00000556310 RHOXF2BP0C7M4 288 aa10.94□□□□□ -0.66
SLIRP-205ENST00000556310 IL1RNP18510 177 aa10.94□□□□□ -0.66
SLIRP-205ENST00000556310 NR1D1P20393 614 aa10.94□□□□□ -0.66
SLIRP-205ENST00000556310 AHRP35869 848 aa10.94□□□□□ -0.66
SLIRP-205ENST00000556310 GMPRP36959 345 aa10.94□□□□□ -0.66
SLIRP-205ENST00000556310 GDF5P43026 501 aa10.94□□□□□ -0.66
SLIRP-205ENST00000556310 SERPINB9P50453 376 aa10.94□□□□□ -0.66
SLIRP-205ENST00000556310 CCL11P51671 97 aa10.94□□□□□ -0.66
SLIRP-205ENST00000556310 PGDP52209 483 aa10.94□□□□□ -0.66
SLIRP-205ENST00000556310 SNRPNP63162 240 aaKnown RBP10.94□□□□□ -0.66
SLIRP-205ENST00000556310 KLC1Q07866 573 aa10.94□□□□□ -0.66
SLIRP-205ENST00000556310 PWP1Q13610 501 aa10.94□□□□□ -0.66
SLIRP-205ENST00000556310 RBBP7Q16576 425 aa10.94□□□□□ -0.66
SLIRP-205ENST00000556310 FAM83EQ2M2I3 478 aa10.94□□□□□ -0.66
SLIRP-205ENST00000556310 C18orf21Q32NC0 220 aaPredicted RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms