RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 SDHDO14521 159 aa10.56□□□□□ -0.72
TMEM260-208ENST00000555905 TOX3O15405 576 aaPredicted RBP10.56□□□□□ -0.72
TMEM260-208ENST00000555905 KIF1CO43896 1103 aaKnown RBP10.56□□□□□ -0.72
TMEM260-208ENST00000555905 LCMT2O60294 686 aaKnown RBP10.56□□□□□ -0.72
TMEM260-208ENST00000555905 GDF9O60383 454 aa10.56□□□□□ -0.72
TMEM260-208ENST00000555905 NRP2O60462 931 aa10.56□□□□□ -0.72
TMEM260-208ENST00000555905 CBFA2T3O75081 653 aa10.56□□□□□ -0.72
TMEM260-208ENST00000555905 CLEC3AO75596 197 aa10.56□□□□□ -0.72
TMEM260-208ENST00000555905 ATP6AP2O75787 350 aa10.56□□□□□ -0.72
TMEM260-208ENST00000555905 SERPIND1P05546 499 aa10.56□□□□□ -0.72
TMEM260-208ENST00000555905 PTX3P26022 381 aaPredicted RBP10.56□□□□□ -0.72
TMEM260-208ENST00000555905 EPHA3P29320 983 aa10.56□□□□□ -0.72
TMEM260-208ENST00000555905 MLLT3P42568 568 aaPredicted RBP10.56□□□□□ -0.72
TMEM260-208ENST00000555905 RPS13P62277 151 aaKnown RBP10.56□□□□□ -0.72
TMEM260-208ENST00000555905 CYP4F2P78329 520 aa10.56□□□□□ -0.72
TMEM260-208ENST00000555905 NHLH1Q02575 133 aa10.56□□□□□ -0.72
TMEM260-208ENST00000555905 CFHR1Q03591 330 aa10.56□□□□□ -0.72
TMEM260-208ENST00000555905 RGS1Q08116 209 aa10.56□□□□□ -0.72
TMEM260-208ENST00000555905 SPIDRQ14159 915 aa10.56□□□□□ -0.72
TMEM260-208ENST00000555905 NR6A1Q15406 480 aa10.56□□□□□ -0.72
TMEM260-208ENST00000555905 ATP6AP1LQ52LC2 224 aa10.56□□□□□ -0.72
TMEM260-208ENST00000555905 XKR7Q5GH72 579 aa10.56□□□□□ -0.72
TMEM260-208ENST00000555905 ZC3H12BQ5HYM0 836 aaKnown RBP10.56□□□□□ -0.72
TMEM260-208ENST00000555905 SPDYAQ5MJ70 313 aa10.56□□□□□ -0.72
TMEM260-208ENST00000555905 FAM219BQ5XKK7 198 aa10.56□□□□□ -0.72
TMEM260-208ENST00000555905 FBXO42Q6P3S6 717 aa10.56□□□□□ -0.72
TMEM260-208ENST00000555905 RNF44Q7L0R7 432 aa10.56□□□□□ -0.72
TMEM260-208ENST00000555905 ASCL5Q7RTU5 278 aa10.56□□□□□ -0.72
TMEM260-208ENST00000555905 KMT5CQ86Y97 462 aa10.56□□□□□ -0.72
TMEM260-208ENST00000555905 CACNA2D3Q8IZS8 1091 aa10.56□□□□□ -0.72
TMEM260-208ENST00000555905 ZNF655Q8N720 491 aaPredicted RBP10.56□□□□□ -0.72
TMEM260-208ENST00000555905 ANKRD53Q8N9V6 530 aa10.56□□□□□ -0.72
TMEM260-208ENST00000555905 CCDC197Q8NCU1 140 aa10.56□□□□□ -0.72
TMEM260-208ENST00000555905 TRPV3Q8NET8 790 aa10.56□□□□□ -0.72
TMEM260-208ENST00000555905 OR4D9Q8NGE8 314 aa10.56□□□□□ -0.72
TMEM260-208ENST00000555905 CEP70Q8NHQ1 597 aa10.56□□□□□ -0.72
TMEM260-208ENST00000555905 C10orf82Q8WW14 230 aa10.56□□□□□ -0.72
TMEM260-208ENST00000555905 CMTM7Q96FZ5 175 aa10.56□□□□□ -0.72
TMEM260-208ENST00000555905 PPP3R2Q96LZ3 170 aa10.56□□□□□ -0.72
TMEM260-208ENST00000555905 C3orf30Q96M34 536 aa10.56□□□□□ -0.72
TMEM260-208ENST00000555905 SERPINI1Q99574 410 aa10.56□□□□□ -0.72
TMEM260-208ENST00000555905 EBF4Q9BQW3 602 aa10.56□□□□□ -0.72
TMEM260-208ENST00000555905 CENPKQ9BS16 269 aa10.56□□□□□ -0.72
TMEM260-208ENST00000555905 CCDC28BQ9BUN5 200 aa10.56□□□□□ -0.72
TMEM260-208ENST00000555905 ACPTQ9BZG2 426 aa10.56□□□□□ -0.72
TMEM260-208ENST00000555905 CHRNA10Q9GZZ6 450 aa10.56□□□□□ -0.72
TMEM260-208ENST00000555905 WDR55Q9H6Y2 383 aaPredicted RBP10.56□□□□□ -0.72
TMEM260-208ENST00000555905 PDE7BQ9NP56 450 aa10.56□□□□□ -0.72
TMEM260-208ENST00000555905 DMRT3Q9NQL9 472 aa10.56□□□□□ -0.72
TMEM260-208ENST00000555905 ZFP69BQ9UJL9 534 aa10.56□□□□□ -0.72
TMEM260-208ENST00000555905 PILRAQ9UKJ1 303 aa10.56□□□□□ -0.72
TMEM260-208ENST00000555905 ATXN7L1Q9ULK2 861 aaPredicted RBP10.56□□□□□ -0.72
TMEM260-208ENST00000555905 PPT2Q9UMR5 302 aa10.56□□□□□ -0.72
TMEM260-208ENST00000555905 SLC12A4Q9UP95 1085 aa10.56□□□□□ -0.72
TMEM260-208ENST00000555905 TRIM33Q9UPN9 1127 aa10.56□□□□□ -0.72
TMEM260-208ENST00000555905 AP1M2Q9Y6Q5 423 aa10.56□□□□□ -0.72
TMEM260-208ENST00000555905 MDC1Q14676 2089 aaKnown RBP10.56□□□□□ -0.72
TMEM260-208ENST00000555905 A0A0J9YVX5 310 aa10.55□□□□□ -0.72
TMEM260-208ENST00000555905 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.55□□□□□ -0.72
TMEM260-208ENST00000555905 A8MU76 341 aa10.55□□□□□ -0.72
TMEM260-208ENST00000555905 NDUFS4O43181 175 aa10.55□□□□□ -0.72
TMEM260-208ENST00000555905 CTSVO60911 334 aa10.55□□□□□ -0.72
TMEM260-208ENST00000555905 PEX11AO75192 247 aa10.55□□□□□ -0.72
TMEM260-208ENST00000555905 RSL1D1O76021 490 aaKnown RBP10.55□□□□□ -0.72
TMEM260-208ENST00000555905 SLC35G6P0C7Q6 338 aa10.55□□□□□ -0.72
TMEM260-208ENST00000555905 LBPP18428 481 aa10.55□□□□□ -0.72
TMEM260-208ENST00000555905 ACADVLP49748 655 aa10.55□□□□□ -0.72
TMEM260-208ENST00000555905 LIMK1P53667 647 aa10.55□□□□□ -0.72
TMEM260-208ENST00000555905 HSD11B2P80365 405 aa10.55□□□□□ -0.72
TMEM260-208ENST00000555905 E2F1Q01094 437 aa10.55□□□□□ -0.72
TMEM260-208ENST00000555905 HMGCS1Q01581 520 aa10.55□□□□□ -0.72
TMEM260-208ENST00000555905 GABPB1Q06547 395 aaPredicted RBP10.55□□□□□ -0.72
TMEM260-208ENST00000555905 ILKQ13418 452 aa10.55□□□□□ -0.72
TMEM260-208ENST00000555905 ZIC1Q15915 447 aa10.55□□□□□ -0.72
TMEM260-208ENST00000555905 GALNTL6Q49A17 601 aa10.55□□□□□ -0.72
TMEM260-208ENST00000555905 TMTC4Q5T4D3 741 aa10.55□□□□□ -0.72
TMEM260-208ENST00000555905 ADNP2Q6IQ32 1131 aa10.55□□□□□ -0.72
TMEM260-208ENST00000555905 Q6ZSR9 355 aa10.55□□□□□ -0.72
TMEM260-208ENST00000555905 CHSY3Q70JA7 882 aa10.55□□□□□ -0.72
TMEM260-208ENST00000555905 PIP4P1Q86T03 277 aa10.55□□□□□ -0.72
TMEM260-208ENST00000555905 ASPGQ86U10 573 aa10.55□□□□□ -0.72
TMEM260-208ENST00000555905 MCATQ8IVS2 390 aaKnown RBP10.55□□□□□ -0.72
TMEM260-208ENST00000555905 RNF175Q8N4F7 328 aa10.55□□□□□ -0.72
TMEM260-208ENST00000555905 OR2T11Q8NH01 316 aa10.55□□□□□ -0.72
TMEM260-208ENST00000555905 SLC13A3Q8WWT9 602 aa10.55□□□□□ -0.72
TMEM260-208ENST00000555905 N4BP2L2Q92802 583 aaPredicted RBP10.55□□□□□ -0.72
TMEM260-208ENST00000555905 MAELQ96JY0 434 aaKnown RBP10.55□□□□□ -0.72
TMEM260-208ENST00000555905 OR52B2Q96RD2 323 aa10.55□□□□□ -0.72
TMEM260-208ENST00000555905 PHOX2BQ99453 314 aa10.55□□□□□ -0.72
TMEM260-208ENST00000555905 NLNQ9BYT8 704 aa10.55□□□□□ -0.72
TMEM260-208ENST00000555905 AKTIPQ9H8T0 292 aa10.55□□□□□ -0.72
TMEM260-208ENST00000555905 LRTM1Q9HBL6 345 aa10.55□□□□□ -0.72
TMEM260-208ENST00000555905 TMEM9Q9P0T7 183 aa10.55□□□□□ -0.72
TMEM260-208ENST00000555905 SEMA5BQ9P283 1151 aa10.55□□□□□ -0.72
TMEM260-208ENST00000555905 VPS29Q9UBQ0 182 aa10.55□□□□□ -0.72
TMEM260-208ENST00000555905 IGHV5-10-1A0A0J9YXX1 117 aa10.54□□□□□ -0.72
TMEM260-208ENST00000555905 D6RAR5 112 aa10.54□□□□□ -0.72
TMEM260-208ENST00000555905 E9PBE3 544 aa10.54□□□□□ -0.72
TMEM260-208ENST00000555905 H0YGG7 62 aa10.54□□□□□ -0.72
TMEM260-208ENST00000555905 NTN3O00634 580 aaPredicted RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms