RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 ARFGAP2Q8N6H7 521 aa13.64□□□□□ -0.23
CHD8-208ENST00000555301 ANKRD53Q8N9V6 530 aa13.64□□□□□ -0.23
CHD8-208ENST00000555301 OR7G3Q8NG95 312 aa13.64□□□□□ -0.23
CHD8-208ENST00000555301 OR6Y1Q8NGX8 325 aa13.64□□□□□ -0.23
CHD8-208ENST00000555301 RAB3IL1Q8TBN0 382 aa13.64□□□□□ -0.23
CHD8-208ENST00000555301 AGAP11Q8TF27 550 aa13.64□□□□□ -0.23
CHD8-208ENST00000555301 TM4SF19Q96DZ7 209 aa13.64□□□□□ -0.23
CHD8-208ENST00000555301 NDC1Q9BTX1 674 aa13.64□□□□□ -0.23
CHD8-208ENST00000555301 SLC7A5P2Q9GIP4 190 aa13.64□□□□□ -0.23
CHD8-208ENST00000555301 SPRTNQ9H040 489 aaPredicted RBP13.64□□□□□ -0.23
CHD8-208ENST00000555301 RHBGQ9H310 441 aa13.64□□□□□ -0.23
CHD8-208ENST00000555301 MID1IP1Q9NPA3 183 aa13.64□□□□□ -0.23
CHD8-208ENST00000555301 THSD1Q9NS62 852 aa13.64□□□□□ -0.23
CHD8-208ENST00000555301 ZNF490Q9ULM2 529 aaPredicted RBP13.64□□□□□ -0.23
CHD8-208ENST00000555301 SRPK3Q9UPE1 567 aa13.64□□□□□ -0.23
CHD8-208ENST00000555301 B3GALT1Q9Y5Z6 326 aa13.64□□□□□ -0.23
CHD8-208ENST00000555301 URADA6NGE7 173 aa13.63□□□□□ -0.23
CHD8-208ENST00000555301 CDRT15L2A8MXV6 281 aa13.63□□□□□ -0.23
CHD8-208ENST00000555301 TMEM114B3SHH9 223 aa13.63□□□□□ -0.23
CHD8-208ENST00000555301 NDUFS4O43181 175 aa13.63□□□□□ -0.23
CHD8-208ENST00000555301 ZNF749O43361 778 aa13.63□□□□□ -0.23
CHD8-208ENST00000555301 CLEC3AO75596 197 aa13.63□□□□□ -0.23
CHD8-208ENST00000555301 OR4F21O95013 312 aa13.63□□□□□ -0.23
CHD8-208ENST00000555301 PCNAP12004 261 aa13.63□□□□□ -0.23
CHD8-208ENST00000555301 CD82P27701 267 aa13.63□□□□□ -0.23
CHD8-208ENST00000555301 RGS1Q08116 209 aa13.63□□□□□ -0.23
CHD8-208ENST00000555301 IFT88Q13099 833 aa13.63□□□□□ -0.23
CHD8-208ENST00000555301 ZRSR2Q15696 482 aaKnown RBP13.63□□□□□ -0.23
CHD8-208ENST00000555301 NDUFA9Q16795 377 aa13.63□□□□□ -0.23
CHD8-208ENST00000555301 PRTGQ2VWP7 1150 aa13.63□□□□□ -0.23
CHD8-208ENST00000555301 ARL13AQ5H913 290 aaPredicted RBP13.63□□□□□ -0.23
CHD8-208ENST00000555301 GARNL3Q5VVW2 1013 aa13.63□□□□□ -0.23
CHD8-208ENST00000555301 TTC19Q6DKK2 380 aaPredicted RBP13.63□□□□□ -0.23
CHD8-208ENST00000555301 LETMD1Q6P1Q0 360 aa13.63□□□□□ -0.23
CHD8-208ENST00000555301 SYVN1Q86TM6 617 aa13.63□□□□□ -0.23
CHD8-208ENST00000555301 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.63□□□□□ -0.23
CHD8-208ENST00000555301 MDM1Q8TC05 714 aa13.63□□□□□ -0.23
CHD8-208ENST00000555301 NT5CQ8TCD5 201 aa13.63□□□□□ -0.23
CHD8-208ENST00000555301 PMEPA1Q969W9 287 aa13.63□□□□□ -0.23
CHD8-208ENST00000555301 ZNF578Q96N58 590 aaPredicted RBP13.63□□□□□ -0.23
CHD8-208ENST00000555301 SLC29A3Q9BZD2 475 aa13.63□□□□□ -0.23
CHD8-208ENST00000555301 ULBP3Q9BZM4 244 aa13.63□□□□□ -0.23
CHD8-208ENST00000555301 ELOVL6Q9H5J4 265 aa13.63□□□□□ -0.23
CHD8-208ENST00000555301 SYNPO2LQ9H987 977 aa13.63□□□□□ -0.23
CHD8-208ENST00000555301 ACTR5Q9H9F9 607 aaPredicted RBP13.63□□□□□ -0.23
CHD8-208ENST00000555301 PRM3Q9NNZ6 103 aa13.63□□□□□ -0.23
CHD8-208ENST00000555301 INTS9Q9NV88 658 aaKnown RBP13.63□□□□□ -0.23
CHD8-208ENST00000555301 ZNF225Q9UK10 706 aa13.63□□□□□ -0.23
CHD8-208ENST00000555301 SNX6Q9UNH7 406 aa13.63□□□□□ -0.23
CHD8-208ENST00000555301 RUVBL1Q9Y265 456 aaKnown RBP13.63□□□□□ -0.23
CHD8-208ENST00000555301 A0A1B0GTL3 188 aa13.62□□□□□ -0.23
CHD8-208ENST00000555301 HYKKA2RU49 373 aa13.62□□□□□ -0.23
CHD8-208ENST00000555301 UBFD1O14562 309 aaKnown RBP13.62□□□□□ -0.23
CHD8-208ENST00000555301 BRINP1O60477 761 aa13.62□□□□□ -0.23
CHD8-208ENST00000555301 CPNE3O75131 537 aaKnown RBP13.62□□□□□ -0.23
CHD8-208ENST00000555301 CRCPO75575 148 aa13.62□□□□□ -0.23
CHD8-208ENST00000555301 KRT6AP02538 564 aa13.62□□□□□ -0.23
CHD8-208ENST00000555301 KRT6BP04259 564 aa13.62□□□□□ -0.23
CHD8-208ENST00000555301 SERPIND1P05546 499 aa13.62□□□□□ -0.23
CHD8-208ENST00000555301 CAPN1P07384 714 aa13.62□□□□□ -0.23
CHD8-208ENST00000555301 CTSBP07858 339 aa13.62□□□□□ -0.23
CHD8-208ENST00000555301 SERPINA6P08185 405 aa13.62□□□□□ -0.23
CHD8-208ENST00000555301 CHN1P15882 459 aa13.62□□□□□ -0.23
CHD8-208ENST00000555301 BGNP21810 368 aa13.62□□□□□ -0.23
CHD8-208ENST00000555301 HMOX2P30519 316 aa13.62□□□□□ -0.23
CHD8-208ENST00000555301 SLC5A2P31639 672 aa13.62□□□□□ -0.23
CHD8-208ENST00000555301 PIK3CBP42338 1070 aa13.62□□□□□ -0.23
CHD8-208ENST00000555301 KRT6CP48668 564 aa13.62□□□□□ -0.23
CHD8-208ENST00000555301 STXBP1P61764 594 aaKnown RBP13.62□□□□□ -0.23
CHD8-208ENST00000555301 CYP4F2P78329 520 aa13.62□□□□□ -0.23
CHD8-208ENST00000555301 STX3Q13277 289 aa13.62□□□□□ -0.23
CHD8-208ENST00000555301 MUM1Q2TAK8 710 aa13.62□□□□□ -0.23
CHD8-208ENST00000555301 HKDC1Q2TB90 917 aa13.62□□□□□ -0.23
CHD8-208ENST00000555301 FRG2Q64ET8 278 aa13.62□□□□□ -0.23
CHD8-208ENST00000555301 ATG16L1Q676U5 607 aa13.62□□□□□ -0.23
CHD8-208ENST00000555301 CUZD1Q86UP6 607 aa13.62□□□□□ -0.23
CHD8-208ENST00000555301 CDYL2Q8N8U2 506 aa13.62□□□□□ -0.23
CHD8-208ENST00000555301 METTL6Q8TCB7 284 aa13.62□□□□□ -0.23
CHD8-208ENST00000555301 CREB3L4Q8TEY5 395 aa13.62□□□□□ -0.23
CHD8-208ENST00000555301 ZNF473Q8WTR7 871 aaKnown RBP13.62□□□□□ -0.23
CHD8-208ENST00000555301 DYDC1Q8WWB3 177 aa13.62□□□□□ -0.23
CHD8-208ENST00000555301 CCT6BQ92526 530 aa13.62□□□□□ -0.23
CHD8-208ENST00000555301 CLIP3Q96DZ5 547 aa13.62□□□□□ -0.23
CHD8-208ENST00000555301 LRFN5Q96NI6 719 aa13.62□□□□□ -0.23
CHD8-208ENST00000555301 FRG2BQ96QU4 278 aa13.62□□□□□ -0.23
CHD8-208ENST00000555301 ASCL3Q9NQ33 180 aa13.62□□□□□ -0.23
CHD8-208ENST00000555301 STARD5Q9NSY2 213 aa13.62□□□□□ -0.23
CHD8-208ENST00000555301 CUTCQ9NTM9 273 aa13.62□□□□□ -0.23
CHD8-208ENST00000555301 TXLNGQ9NUQ3 528 aa13.62□□□□□ -0.23
CHD8-208ENST00000555301 PSD3Q9NYI0 1048 aa13.62□□□□□ -0.23
CHD8-208ENST00000555301 FOXJ2Q9P0K8 574 aa13.62□□□□□ -0.23
CHD8-208ENST00000555301 FOXE1O00358 373 aaPredicted RBP13.61□□□□□ -0.23
CHD8-208ENST00000555301 P2RX6O15547 441 aa13.61□□□□□ -0.23
CHD8-208ENST00000555301 STK17BO94768 372 aa13.61□□□□□ -0.23
CHD8-208ENST00000555301 KIAA0754O94854 1291 aa13.61□□□□□ -0.23
CHD8-208ENST00000555301 TIAF1O95411 115 aa13.61□□□□□ -0.23
CHD8-208ENST00000555301 HSPA4LO95757 839 aa13.61□□□□□ -0.23
CHD8-208ENST00000555301 CHRNGP07510 517 aa13.61□□□□□ -0.23
CHD8-208ENST00000555301 UROSP10746 265 aa13.61□□□□□ -0.23
CHD8-208ENST00000555301 CCR10P46092 362 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms