RNA–Protein interactions for RNA: ENST00000555055.5

XRCC3-211, Transcript of X-ray repair cross complementing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC3, Length 2,584 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-211ENST00000555055 ADRB3P13945 408 aa14.31□□□□□ -0.12
XRCC3-211ENST00000555055 PRKACGP22612 351 aa14.31□□□□□ -0.12
XRCC3-211ENST00000555055 HOXA9P31269 272 aa14.31□□□□□ -0.12
XRCC3-211ENST00000555055 SOX9P48436 509 aa14.31□□□□□ -0.12
XRCC3-211ENST00000555055 HNMTP50135 292 aa14.31□□□□□ -0.12
XRCC3-211ENST00000555055 DCDC1P59894 354 aa14.31□□□□□ -0.12
XRCC3-211ENST00000555055 MAD2L1Q13257 205 aaPredicted RBP14.31□□□□□ -0.12
XRCC3-211ENST00000555055 AQP6Q13520 282 aa14.31□□□□□ -0.12
XRCC3-211ENST00000555055 SPCS2Q15005 226 aa14.31□□□□□ -0.12
XRCC3-211ENST00000555055 HKDC1Q2TB90 917 aa14.31□□□□□ -0.12
XRCC3-211ENST00000555055 FAM83HQ6ZRV2 1179 aaPredicted RBP14.31□□□□□ -0.12
XRCC3-211ENST00000555055 SYT12Q8IV01 421 aa14.31□□□□□ -0.12
XRCC3-211ENST00000555055 L3MBTL4Q8NA19 623 aa14.31□□□□□ -0.12
XRCC3-211ENST00000555055 ZNF740Q8NDX6 193 aa14.31□□□□□ -0.12
XRCC3-211ENST00000555055 NUS1Q96E22 293 aa14.31□□□□□ -0.12
XRCC3-211ENST00000555055 TRPM6Q9BX84 2022 aa14.31□□□□□ -0.12
XRCC3-211ENST00000555055 ANKMY1Q9P2S6 941 aa14.31□□□□□ -0.12
XRCC3-211ENST00000555055 TSC22D4Q9Y3Q8 395 aa14.31□□□□□ -0.12
XRCC3-211ENST00000555055 TSPAN11A1L157 253 aa14.3□□□□□ -0.12
XRCC3-211ENST00000555055 ANXA6P08133 673 aa14.3□□□□□ -0.12
XRCC3-211ENST00000555055 RAP2AP10114 183 aa14.3□□□□□ -0.12
XRCC3-211ENST00000555055 JUPP14923 745 aa14.3□□□□□ -0.12
XRCC3-211ENST00000555055 ZNF8P17098 575 aaPredicted RBP14.3□□□□□ -0.12
XRCC3-211ENST00000555055 CTF1Q16619 201 aa14.3□□□□□ -0.12
XRCC3-211ENST00000555055 HNRNPA1L2Q32P51 320 aaKnown RBP14.3□□□□□ -0.12
XRCC3-211ENST00000555055 C6orf141Q5SZD1 244 aa14.3□□□□□ -0.12
XRCC3-211ENST00000555055 ZNF480Q8WV37 535 aa14.3□□□□□ -0.12
XRCC3-211ENST00000555055 ZNF566Q969W8 418 aa14.3□□□□□ -0.12
XRCC3-211ENST00000555055 TMBIM1Q969X1 311 aa14.3□□□□□ -0.12
XRCC3-211ENST00000555055 OTUB2Q96DC9 234 aa14.3□□□□□ -0.12
XRCC3-211ENST00000555055 CTRCQ99895 268 aa14.3□□□□□ -0.12
XRCC3-211ENST00000555055 LGR4Q9BXB1 951 aa14.3□□□□□ -0.12
XRCC3-211ENST00000555055 PLA2G2FQ9BZM2 168 aa14.3□□□□□ -0.12
XRCC3-211ENST00000555055 ANKHQ9HCJ1 492 aa14.3□□□□□ -0.12
XRCC3-211ENST00000555055 NECTIN3Q9NQS3 549 aa14.3□□□□□ -0.12
XRCC3-211ENST00000555055 B4GAT1O43505 415 aa14.3□□□□□ -0.12
XRCC3-211ENST00000555055 DIRAS1O95057 198 aa14.3□□□□□ -0.12
XRCC3-211ENST00000555055 ABCB1P08183 1280 aaPredicted RBP14.3□□□□□ -0.12
XRCC3-211ENST00000555055 MTHFRP42898 656 aa14.3□□□□□ -0.12
XRCC3-211ENST00000555055 CLDN8P56748 225 aa14.3□□□□□ -0.12
XRCC3-211ENST00000555055 TBPL1P62380 186 aa14.3□□□□□ -0.12
XRCC3-211ENST00000555055 RUNDC3AQ59EK9 446 aa14.3□□□□□ -0.12
XRCC3-211ENST00000555055 LDLRAP1Q5SW96 308 aa14.3□□□□□ -0.12
XRCC3-211ENST00000555055 C1orf52Q8N6N3 182 aaKnown RBP14.3□□□□□ -0.12
XRCC3-211ENST00000555055 CHDHQ8NE62 594 aaPredicted RBP14.3□□□□□ -0.12
XRCC3-211ENST00000555055 COQ10AQ96MF6 247 aa14.3□□□□□ -0.12
XRCC3-211ENST00000555055 RPP25Q9BUL9 199 aaKnown RBP14.3□□□□□ -0.12
XRCC3-211ENST00000555055 SMURF2Q9HAU4 748 aa14.3□□□□□ -0.12
XRCC3-211ENST00000555055 ELOVL7A1L3X0 281 aa14.29□□□□□ -0.12
XRCC3-211ENST00000555055 EPOPA6NHQ4 379 aa14.29□□□□□ -0.12
XRCC3-211ENST00000555055 CXCR6O00574 342 aa14.29□□□□□ -0.12
XRCC3-211ENST00000555055 RFXANKO14593 260 aa14.29□□□□□ -0.12
XRCC3-211ENST00000555055 LINC01565O15544 149 aa14.29□□□□□ -0.12
XRCC3-211ENST00000555055 HTR1AP08908 422 aa14.29□□□□□ -0.12
XRCC3-211ENST00000555055 LAMP1P11279 417 aa14.29□□□□□ -0.12
XRCC3-211ENST00000555055 GRK3P35626 688 aa14.29□□□□□ -0.12
XRCC3-211ENST00000555055 SERPINB10P48595 397 aa14.29□□□□□ -0.12
XRCC3-211ENST00000555055 AP1S2P56377 157 aa14.29□□□□□ -0.12
XRCC3-211ENST00000555055 CDC20Q12834 499 aa14.29□□□□□ -0.12
XRCC3-211ENST00000555055 IL18R1Q13478 541 aa14.29□□□□□ -0.12
XRCC3-211ENST00000555055 UGT8Q16880 541 aa14.29□□□□□ -0.12
XRCC3-211ENST00000555055 ZNF621Q6ZSS3 439 aa14.29□□□□□ -0.12
XRCC3-211ENST00000555055 STK32CQ86UX6 486 aa14.29□□□□□ -0.12
XRCC3-211ENST00000555055 PLPP6Q8IY26 295 aa14.29□□□□□ -0.12
XRCC3-211ENST00000555055 SVOPLQ8N434 492 aa14.29□□□□□ -0.12
XRCC3-211ENST00000555055 MFSD4AQ8N468 514 aa14.29□□□□□ -0.12
XRCC3-211ENST00000555055 HUS1BQ8NHY5 278 aa14.29□□□□□ -0.12
XRCC3-211ENST00000555055 WDR20Q8TBZ3 569 aa14.29□□□□□ -0.12
XRCC3-211ENST00000555055 SH3KBP1Q96B97 665 aa14.29□□□□□ -0.12
XRCC3-211ENST00000555055 KXD1Q9BQD3 176 aa14.29□□□□□ -0.12
XRCC3-211ENST00000555055 KAT8Q9H7Z6 458 aaKnown RBP14.29□□□□□ -0.12
XRCC3-211ENST00000555055 BAG5Q9UL15 447 aa14.29□□□□□ -0.12
XRCC3-211ENST00000555055 GON4LQ3T8J9 2241 aa14.29□□□□□ -0.12
XRCC3-211ENST00000555055 PCM1Q15154 2024 aa14.29□□□□□ -0.12
XRCC3-211ENST00000555055 HOXC11O43248 304 aaPredicted RBP14.29□□□□□ -0.12
XRCC3-211ENST00000555055 SERPINA1P01009 418 aa14.29□□□□□ -0.12
XRCC3-211ENST00000555055 CATP04040 527 aaKnown RBP14.29□□□□□ -0.12
XRCC3-211ENST00000555055 PCCBP05166 539 aa14.29□□□□□ -0.12
XRCC3-211ENST00000555055 SRPRAP08240 638 aaKnown RBP14.29□□□□□ -0.12
XRCC3-211ENST00000555055 HOXB6P17509 224 aaKnown RBP14.29□□□□□ -0.12
XRCC3-211ENST00000555055 HTR1BP28222 390 aa14.29□□□□□ -0.12
XRCC3-211ENST00000555055 PTPN6P29350 595 aa14.29□□□□□ -0.12
XRCC3-211ENST00000555055 RPS13P62277 151 aaKnown RBP14.29□□□□□ -0.12
XRCC3-211ENST00000555055 CNTN1Q12860 1018 aa14.29□□□□□ -0.12
XRCC3-211ENST00000555055 SP140Q13342 867 aa14.29□□□□□ -0.12
XRCC3-211ENST00000555055 ZNF362Q5T0B9 420 aaPredicted RBP14.29□□□□□ -0.12
XRCC3-211ENST00000555055 PLEKHG7Q6ZR37 379 aa14.29□□□□□ -0.12
XRCC3-211ENST00000555055 LACC1Q8IV20 430 aa14.29□□□□□ -0.12
XRCC3-211ENST00000555055 TCAIMQ8N3R3 496 aa14.29□□□□□ -0.12
XRCC3-211ENST00000555055 OR8J3Q8NGG0 315 aa14.29□□□□□ -0.12
XRCC3-211ENST00000555055 PHF10Q8WUB8 498 aaKnown RBP14.29□□□□□ -0.12
XRCC3-211ENST00000555055 OR8D1Q8WZ84 308 aa14.29□□□□□ -0.12
XRCC3-211ENST00000555055 SMARCD2Q92925 531 aa14.29□□□□□ -0.12
XRCC3-211ENST00000555055 FAM120BQ96EK7 910 aaKnown RBP14.29□□□□□ -0.12
XRCC3-211ENST00000555055 CMTM7Q96FZ5 175 aa14.29□□□□□ -0.12
XRCC3-211ENST00000555055 CCDC115Q96NT0 180 aa14.29□□□□□ -0.12
XRCC3-211ENST00000555055 PANX1Q96RD7 426 aa14.29□□□□□ -0.12
XRCC3-211ENST00000555055 THG1LQ9NWX6 298 aaKnown RBP14.29□□□□□ -0.12
XRCC3-211ENST00000555055 DKK3Q9UBP4 350 aa14.29□□□□□ -0.12
XRCC3-211ENST00000555055 VPS29Q9UBQ0 182 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms