RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 MAP4K3Q8IVH8 894 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 LRRN4CLQ8ND94 238 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 PHC3Q8NDX5 983 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 OR9K2Q8NGE7 335 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 JPH3Q8WXH2 748 aaPredicted RBP6.7□□□□□ -1.34
SYNE2-216ENST00000555002 KCTD7Q96MP8 289 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 KCNH6Q9H252 994 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 RANBP3Q9H6Z4 567 aaPredicted RBP6.7□□□□□ -1.34
SYNE2-216ENST00000555002 S100A14Q9HCY8 104 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 TIGARQ9NQ88 270 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 PCTPQ9UKL6 214 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 MMP20O60882 483 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 OR4F21O95013 312 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 LCP2Q13094 533 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 TRIM28Q13263 835 aaKnown RBP6.7□□□□□ -1.34
SYNE2-216ENST00000555002 UGCGQ16739 394 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 SLC25A52Q3SY17 297 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 KHDC1LQ5JSQ8 128 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 TMEM69Q5SWH9 247 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 TIGD4Q8IY51 512 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 NFKBIDQ8NI38 313 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 SLC22A17Q8WUG5 538 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 C22orf15Q8WYQ4 148 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 CAMK1GQ96NX5 476 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 DUSP26Q9BV47 211 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 CACNG4Q9UBN1 327 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 SSX4O60224 188 aa6.69□□□□□ -1.34
SYNE2-216ENST00000555002 OPN1SWP03999 348 aa6.69□□□□□ -1.34
SYNE2-216ENST00000555002 ZNF773Q6PK81 442 aa6.69□□□□□ -1.34
SYNE2-216ENST00000555002 KIF18BQ86Y91 864 aa6.69□□□□□ -1.34
SYNE2-216ENST00000555002 PEX13Q92968 403 aa6.69□□□□□ -1.34
SYNE2-216ENST00000555002 P2RY11Q96G91 374 aa6.69□□□□□ -1.34
SYNE2-216ENST00000555002 SNX27Q96L92 541 aa6.69□□□□□ -1.34
SYNE2-216ENST00000555002 MAP3K3Q99759 626 aa6.69□□□□□ -1.34
SYNE2-216ENST00000555002 ATG5Q9H1Y0 275 aa6.69□□□□□ -1.34
SYNE2-216ENST00000555002 DDX4Q9NQI0 724 aaKnown RBP6.69□□□□□ -1.34
SYNE2-216ENST00000555002 GLOD5A6NK44 160 aa6.69□□□□□ -1.34
SYNE2-216ENST00000555002 ZNF84P51523 738 aa6.69□□□□□ -1.34
SYNE2-216ENST00000555002 CRHR2Q13324 411 aa6.69□□□□□ -1.34
SYNE2-216ENST00000555002 ATPAF1Q5TC12 328 aaPredicted RBP6.69□□□□□ -1.34
SYNE2-216ENST00000555002 EIF5AL1Q6IS14 154 aaKnown RBP6.69□□□□□ -1.34
SYNE2-216ENST00000555002 ZC3H14Q6PJT7 736 aaKnown RBP6.69□□□□□ -1.34
SYNE2-216ENST00000555002 OR10G2Q8NGC3 310 aa6.69□□□□□ -1.34
SYNE2-216ENST00000555002 SPPL2BQ8TCT7 592 aa6.69□□□□□ -1.34
SYNE2-216ENST00000555002 EPS8L1Q8TE68 723 aa6.69□□□□□ -1.34
SYNE2-216ENST00000555002 SH3RF2Q8TEC5 729 aa6.69□□□□□ -1.34
SYNE2-216ENST00000555002 CCNL2Q96S94 520 aaPredicted RBP6.69□□□□□ -1.34
SYNE2-216ENST00000555002 C17orf62Q9BQA9 187 aa6.69□□□□□ -1.34
SYNE2-216ENST00000555002 ASLP04424 464 aa6.69□□□□□ -1.34
SYNE2-216ENST00000555002 CLCN4P51793 760 aa6.69□□□□□ -1.34
SYNE2-216ENST00000555002 PNLIPRP1P54315 467 aa6.69□□□□□ -1.34
SYNE2-216ENST00000555002 SEC23BQ15437 767 aa6.69□□□□□ -1.34
SYNE2-216ENST00000555002 EXOC3L2Q2M3D2 409 aa6.69□□□□□ -1.34
SYNE2-216ENST00000555002 SLC9B2Q86UD5 537 aa6.69□□□□□ -1.34
SYNE2-216ENST00000555002 SLC43A2Q8N370 569 aa6.69□□□□□ -1.34
SYNE2-216ENST00000555002 TTLQ8NG68 377 aa6.69□□□□□ -1.34
SYNE2-216ENST00000555002 STYXQ8WUJ0 223 aa6.69□□□□□ -1.34
SYNE2-216ENST00000555002 ZNF347Q96SE7 839 aa6.69□□□□□ -1.34
SYNE2-216ENST00000555002 PCDHB16Q9NRJ7 776 aa6.69□□□□□ -1.34
SYNE2-216ENST00000555002 TAS2R1Q9NYW7 299 aa6.69□□□□□ -1.34
SYNE2-216ENST00000555002 RPH3ALQ9UNE2 315 aa6.69□□□□□ -1.34
SYNE2-216ENST00000555002 PIP5K1CO60331 668 aa6.69□□□□□ -1.34
SYNE2-216ENST00000555002 MTX2O75431 263 aa6.69□□□□□ -1.34
SYNE2-216ENST00000555002 MT-ND5P03915 603 aa6.69□□□□□ -1.34
SYNE2-216ENST00000555002 NMBRP28336 390 aa6.69□□□□□ -1.34
SYNE2-216ENST00000555002 SLC24A5Q71RS6 500 aa6.69□□□□□ -1.34
SYNE2-216ENST00000555002 PHC2Q8IXK0 858 aa6.69□□□□□ -1.34
SYNE2-216ENST00000555002 ELMOD2Q8IZ81 293 aa6.69□□□□□ -1.34
SYNE2-216ENST00000555002 CIDECQ96AQ7 238 aaPredicted RBP6.69□□□□□ -1.34
SYNE2-216ENST00000555002 HOPXQ9BPY8 73 aaPredicted RBP6.69□□□□□ -1.34
SYNE2-216ENST00000555002 RIOX1Q9H6W3 641 aa6.69□□□□□ -1.34
SYNE2-216ENST00000555002 B3GNT2Q9NY97 397 aa6.69□□□□□ -1.34
SYNE2-216ENST00000555002 MAGEA8P43361 318 aa6.69□□□□□ -1.34
SYNE2-216ENST00000555002 ZNF267Q14586 743 aaPredicted RBP6.69□□□□□ -1.34
SYNE2-216ENST00000555002 LPAL2Q16609 132 aa6.69□□□□□ -1.34
SYNE2-216ENST00000555002 RBM20Q5T481 1227 aaKnown RBP6.69□□□□□ -1.34
SYNE2-216ENST00000555002 POTEHQ6S545 545 aa6.69□□□□□ -1.34
SYNE2-216ENST00000555002 ARHGAP12Q8IWW6 846 aa6.69□□□□□ -1.34
SYNE2-216ENST00000555002 OR5B12Q96R08 314 aa6.69□□□□□ -1.34
SYNE2-216ENST00000555002 ZCCHC3Q9NUD5 404 aaKnown RBP6.69□□□□□ -1.34
SYNE2-216ENST00000555002 CDH22Q9UJ99 828 aa6.69□□□□□ -1.34
SYNE2-216ENST00000555002 PXDNLA1KZ92 1463 aa6.69□□□□□ -1.34
SYNE2-216ENST00000555002 CYP3A5P20815 502 aa6.69□□□□□ -1.34
SYNE2-216ENST00000555002 UBE2NP61088 152 aaKnown RBP6.69□□□□□ -1.34
SYNE2-216ENST00000555002 RSU1Q15404 277 aa6.69□□□□□ -1.34
SYNE2-216ENST00000555002 TPRG1LQ5T0D9 272 aa6.69□□□□□ -1.34
SYNE2-216ENST00000555002 TMEM214Q6NUQ4 689 aaKnown RBP6.69□□□□□ -1.34
SYNE2-216ENST00000555002 PQLC1Q8N2U9 271 aa6.69□□□□□ -1.34
SYNE2-216ENST00000555002 PRR11Q96HE9 360 aaPredicted RBP6.69□□□□□ -1.34
SYNE2-216ENST00000555002 WACQ9BTA9 647 aa6.69□□□□□ -1.34
SYNE2-216ENST00000555002 C11orf49Q9H6J7 331 aa6.69□□□□□ -1.34
SYNE2-216ENST00000555002 PDE10AQ9Y233 779 aa6.69□□□□□ -1.34
SYNE2-216ENST00000555002 RPL36Q9Y3U8 105 aaKnown RBP6.69□□□□□ -1.34
SYNE2-216ENST00000555002 NUP214P35658 2090 aaPredicted RBP6.69□□□□□ -1.34
SYNE2-216ENST00000555002 PRDM15P57071 1507 aaPredicted RBP6.69□□□□□ -1.34
SYNE2-216ENST00000555002 ZNF860A6NHJ4 632 aa6.69□□□□□ -1.34
SYNE2-216ENST00000555002 PET100P0DJ07 73 aa6.69□□□□□ -1.34
SYNE2-216ENST00000555002 ITPRIPL2Q3MIP1 535 aa6.69□□□□□ -1.34
SYNE2-216ENST00000555002 GALNT12Q8IXK2 581 aa6.69□□□□□ -1.34
SYNE2-216ENST00000555002 PGAM5Q96HS1 289 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms