RNA–Protein interactions for RNA: ENST00000554943.5

PPP4R3A-206, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5 BASIC

Gene PPP4R3A, Length 3,369 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-206ENST00000554943 ANKRD46Q86W74 232 aa12.13□□□□□ -0.47
PPP4R3A-206ENST00000554943 PSMA8Q8TAA3 256 aa12.13□□□□□ -0.47
PPP4R3A-206ENST00000554943 RNF217Q8TC41 542 aa12.13□□□□□ -0.47
PPP4R3A-206ENST00000554943 HSPBAP1Q96EW2 488 aa12.13□□□□□ -0.47
PPP4R3A-206ENST00000554943 FZD3Q9NPG1 666 aa12.13□□□□□ -0.47
PPP4R3A-206ENST00000554943 NDUFAF4Q9P032 175 aa12.13□□□□□ -0.47
PPP4R3A-206ENST00000554943 CORO2BQ9UQ03 480 aa12.13□□□□□ -0.47
PPP4R3A-206ENST00000554943 PCDHGA2Q9Y5H1 932 aa12.13□□□□□ -0.47
PPP4R3A-206ENST00000554943 CLDN24A6NM45 220 aa12.13□□□□□ -0.47
PPP4R3A-206ENST00000554943 CKMP06732 381 aa12.13□□□□□ -0.47
PPP4R3A-206ENST00000554943 EPHA2P29317 976 aa12.13□□□□□ -0.47
PPP4R3A-206ENST00000554943 CCR3P51677 355 aa12.13□□□□□ -0.47
PPP4R3A-206ENST00000554943 ERVFC1P60507 584 aa12.13□□□□□ -0.47
PPP4R3A-206ENST00000554943 FCHO2Q0JRZ9 810 aa12.13□□□□□ -0.47
PPP4R3A-206ENST00000554943 HABP4Q5JVS0 413 aaKnown RBP12.13□□□□□ -0.47
PPP4R3A-206ENST00000554943 Q6ZVL8 140 aa12.13□□□□□ -0.47
PPP4R3A-206ENST00000554943 ENTHD1Q8IYW4 607 aa12.13□□□□□ -0.47
PPP4R3A-206ENST00000554943 CLEC4FQ8N1N0 589 aa12.13□□□□□ -0.47
PPP4R3A-206ENST00000554943 MRPL43Q8N983 215 aaKnown RBP12.13□□□□□ -0.47
PPP4R3A-206ENST00000554943 ZNF555Q8NEP9 628 aa12.13□□□□□ -0.47
PPP4R3A-206ENST00000554943 MTERF3Q96E29 417 aa12.13□□□□□ -0.47
PPP4R3A-206ENST00000554943 HSH2DQ96JZ2 352 aa12.13□□□□□ -0.47
PPP4R3A-206ENST00000554943 APOLD1Q96LR9 279 aa12.13□□□□□ -0.47
PPP4R3A-206ENST00000554943 RIOK2Q9BVS4 552 aaKnown RBP12.13□□□□□ -0.47
PPP4R3A-206ENST00000554943 ALOXE3Q9BYJ1 711 aa12.13□□□□□ -0.47
PPP4R3A-206ENST00000554943 RHBGQ9H310 441 aa12.13□□□□□ -0.47
PPP4R3A-206ENST00000554943 CD84Q9UIB8 345 aa12.13□□□□□ -0.47
PPP4R3A-206ENST00000554943 LYVE1Q9Y5Y7 322 aa12.13□□□□□ -0.47
PPP4R3A-206ENST00000554943 TRANK1O15050 2925 aa12.13□□□□□ -0.47
PPP4R3A-206ENST00000554943 ZNF99A8MXY4 864 aaPredicted RBP12.13□□□□□ -0.47
PPP4R3A-206ENST00000554943 CACNB4O00305 520 aaPredicted RBP12.13□□□□□ -0.47
PPP4R3A-206ENST00000554943 FOXD2O60548 495 aaPredicted RBP12.13□□□□□ -0.47
PPP4R3A-206ENST00000554943 PPIBP23284 216 aaKnown RBP12.13□□□□□ -0.47
PPP4R3A-206ENST00000554943 FSHRP23945 695 aa12.13□□□□□ -0.47
PPP4R3A-206ENST00000554943 IGFBP5P24593 272 aa12.13□□□□□ -0.47
PPP4R3A-206ENST00000554943 SELENOWP63302 87 aa12.13□□□□□ -0.47
PPP4R3A-206ENST00000554943 HSPA14Q0VDF9 509 aa12.13□□□□□ -0.47
PPP4R3A-206ENST00000554943 AGERQ15109 404 aa12.13□□□□□ -0.47
PPP4R3A-206ENST00000554943 ADPRMQ3LIE5 342 aa12.13□□□□□ -0.47
PPP4R3A-206ENST00000554943 TOR1AIP1Q5JTV8 583 aa12.13□□□□□ -0.47
PPP4R3A-206ENST00000554943 SPESP1Q6UW49 350 aa12.13□□□□□ -0.47
PPP4R3A-206ENST00000554943 ARMCX6Q7L4S7 300 aa12.13□□□□□ -0.47
PPP4R3A-206ENST00000554943 TMIEQ8NEW7 156 aa12.13□□□□□ -0.47
PPP4R3A-206ENST00000554943 HUS1BQ8NHY5 278 aa12.13□□□□□ -0.47
PPP4R3A-206ENST00000554943 PHF10Q8WUB8 498 aaKnown RBP12.13□□□□□ -0.47
PPP4R3A-206ENST00000554943 ZNF480Q8WV37 535 aa12.13□□□□□ -0.47
PPP4R3A-206ENST00000554943 PLEKHA8Q96JA3 519 aa12.13□□□□□ -0.47
PPP4R3A-206ENST00000554943 ZSWIM3Q96MP5 696 aa12.13□□□□□ -0.47
PPP4R3A-206ENST00000554943 LINC00597Q9H2U6 94 aa12.13□□□□□ -0.47
PPP4R3A-206ENST00000554943 ASAH2Q9NR71 780 aa12.13□□□□□ -0.47
PPP4R3A-206ENST00000554943 TDP1Q9NUW8 608 aa12.13□□□□□ -0.47
PPP4R3A-206ENST00000554943 GIN1Q9NXP7 522 aa12.13□□□□□ -0.47
PPP4R3A-206ENST00000554943 GSTA4O15217 222 aa12.12□□□□□ -0.47
PPP4R3A-206ENST00000554943 PCDHGA12O60330 932 aa12.12□□□□□ -0.47
PPP4R3A-206ENST00000554943 SLC16A8O95907 504 aa12.12□□□□□ -0.47
PPP4R3A-206ENST00000554943 GALK1P51570 392 aa12.12□□□□□ -0.47
PPP4R3A-206ENST00000554943 MVKQ03426 396 aa12.12□□□□□ -0.47
PPP4R3A-206ENST00000554943 FOXD4Q12950 439 aaPredicted RBP12.12□□□□□ -0.47
PPP4R3A-206ENST00000554943 TMEM52BQ4KMG9 183 aa12.12□□□□□ -0.47
PPP4R3A-206ENST00000554943 PARS2Q7L3T8 475 aaKnown RBP12.12□□□□□ -0.47
PPP4R3A-206ENST00000554943 METTL4Q8N3J2 472 aa12.12□□□□□ -0.47
PPP4R3A-206ENST00000554943 ABHD11Q8NFV4 315 aa12.12□□□□□ -0.47
PPP4R3A-206ENST00000554943 CNIH3Q8TBE1 160 aa12.12□□□□□ -0.47
PPP4R3A-206ENST00000554943 NEIL2Q969S2 332 aa12.12□□□□□ -0.47
PPP4R3A-206ENST00000554943 FAM131CQ96AQ9 280 aa12.12□□□□□ -0.47
PPP4R3A-206ENST00000554943 SH3YL1Q96HL8 342 aaPredicted RBP12.12□□□□□ -0.47
PPP4R3A-206ENST00000554943 NODALQ96S42 347 aa12.12□□□□□ -0.47
PPP4R3A-206ENST00000554943 TPT1P8Q9HAU6 139 aa12.12□□□□□ -0.47
PPP4R3A-206ENST00000554943 ACOT13Q9NPJ3 140 aa12.12□□□□□ -0.47
PPP4R3A-206ENST00000554943 ERGIC3Q9Y282 383 aa12.12□□□□□ -0.47
PPP4R3A-206ENST00000554943 RFPL2O75678 378 aa12.12□□□□□ -0.47
PPP4R3A-206ENST00000554943 GSNP06396 782 aa12.12□□□□□ -0.47
PPP4R3A-206ENST00000554943 NUDT7P0C024 238 aa12.12□□□□□ -0.47
PPP4R3A-206ENST00000554943 DDX5P17844 614 aaKnown RBP12.12□□□□□ -0.47
PPP4R3A-206ENST00000554943 UGT2B10P36537 528 aa12.12□□□□□ -0.47
PPP4R3A-206ENST00000554943 PIK3CBP42338 1070 aa12.12□□□□□ -0.47
PPP4R3A-206ENST00000554943 SLC15A1P46059 708 aa12.12□□□□□ -0.47
PPP4R3A-206ENST00000554943 PLIN5Q00G26 463 aa12.12□□□□□ -0.47
PPP4R3A-206ENST00000554943 TEAD2Q15562 447 aa12.12□□□□□ -0.47
PPP4R3A-206ENST00000554943 LRRC23Q53EV4 343 aaPredicted RBP12.12□□□□□ -0.47
PPP4R3A-206ENST00000554943 KIAA1614Q5VZ46 1190 aa12.12□□□□□ -0.47
PPP4R3A-206ENST00000554943 VTCN1Q7Z7D3 282 aa12.12□□□□□ -0.47
PPP4R3A-206ENST00000554943 NPAS3Q8IXF0 933 aa12.12□□□□□ -0.47
PPP4R3A-206ENST00000554943 SLC15A4Q8N697 577 aa12.12□□□□□ -0.47
PPP4R3A-206ENST00000554943 FOXJ1Q92949 421 aa12.12□□□□□ -0.47
PPP4R3A-206ENST00000554943 ZNF707Q96C28 371 aaPredicted RBP12.12□□□□□ -0.47
PPP4R3A-206ENST00000554943 DOHHQ9BU89 302 aa12.12□□□□□ -0.47
PPP4R3A-206ENST00000554943 BEGAINQ9BUH8 593 aa12.12□□□□□ -0.47
PPP4R3A-206ENST00000554943 DUSP26Q9BV47 211 aa12.12□□□□□ -0.47
PPP4R3A-206ENST00000554943 SLIRPQ9GZT3 109 aaKnown RBP12.12□□□□□ -0.47
PPP4R3A-206ENST00000554943 DMRT3Q9NQL9 472 aa12.12□□□□□ -0.47
PPP4R3A-206ENST00000554943 TBC1D14Q9P2M4 693 aa12.12□□□□□ -0.47
PPP4R3A-206ENST00000554943 C9P02748 559 aa12.12□□□□□ -0.47
PPP4R3A-206ENST00000554943 HIST1H2AGP0C0S8 130 aaPredicted RBP12.12□□□□□ -0.47
PPP4R3A-206ENST00000554943 HIST1H2ADP20671 130 aa12.12□□□□□ -0.47
PPP4R3A-206ENST00000554943 ITPKAP23677 461 aa12.12□□□□□ -0.47
PPP4R3A-206ENST00000554943 PDHA2P29803 388 aa12.12□□□□□ -0.47
PPP4R3A-206ENST00000554943 VEGFBP49765 207 aa12.12□□□□□ -0.47
PPP4R3A-206ENST00000554943 RBBP4Q09028 425 aa12.12□□□□□ -0.47
PPP4R3A-206ENST00000554943 BNIP3Q12983 259 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms