RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 CD244Q9BZW8 370 aa11.75□□□□□ -0.53
SYNE2-214ENST00000554928 ACSS2Q9NR19 701 aa11.75□□□□□ -0.53
SYNE2-214ENST00000554928 CPSF2Q9P2I0 782 aaKnown RBP11.75□□□□□ -0.53
SYNE2-214ENST00000554928 PSMC3IPQ9P2W1 217 aaPredicted RBP11.75□□□□□ -0.53
SYNE2-214ENST00000554928 PTRH2Q9Y3E5 179 aaKnown RBP11.75□□□□□ -0.53
SYNE2-214ENST00000554928 KCNE2Q9Y6J6 123 aa11.75□□□□□ -0.53
SYNE2-214ENST00000554928 IGSF10Q6WRI0 2623 aa11.74□□□□□ -0.53
SYNE2-214ENST00000554928 ZNF860A6NHJ4 632 aa11.74□□□□□ -0.53
SYNE2-214ENST00000554928 C9J4A7 227 aa11.74□□□□□ -0.53
SYNE2-214ENST00000554928 KLK8O60259 260 aa11.74□□□□□ -0.53
SYNE2-214ENST00000554928 TBX6O95947 436 aaPredicted RBP11.74□□□□□ -0.53
SYNE2-214ENST00000554928 S100BP04271 92 aaPredicted RBP11.74□□□□□ -0.53
SYNE2-214ENST00000554928 PRB1P04280 392 aa11.74□□□□□ -0.53
SYNE2-214ENST00000554928 SERPIND1P05546 499 aa11.74□□□□□ -0.53
SYNE2-214ENST00000554928 FAM87AP0C7U9 286 aa11.74□□□□□ -0.53
SYNE2-214ENST00000554928 C1GALT1C1LP0DN25 315 aa11.74□□□□□ -0.53
SYNE2-214ENST00000554928 IL1RNP18510 177 aa11.74□□□□□ -0.53
SYNE2-214ENST00000554928 HYAL2Q12891 473 aa11.74□□□□□ -0.53
SYNE2-214ENST00000554928 DOC2AQ14183 400 aa11.74□□□□□ -0.53
SYNE2-214ENST00000554928 SETDB1Q15047 1291 aa11.74□□□□□ -0.53
SYNE2-214ENST00000554928 RBBP5Q15291 538 aaKnown RBP11.74□□□□□ -0.53
SYNE2-214ENST00000554928 NKG7Q16617 165 aa11.74□□□□□ -0.53
SYNE2-214ENST00000554928 PDK4Q16654 411 aa11.74□□□□□ -0.53
SYNE2-214ENST00000554928 UGT8Q16880 541 aa11.74□□□□□ -0.53
SYNE2-214ENST00000554928 MUM1Q2TAK8 710 aa11.74□□□□□ -0.53
SYNE2-214ENST00000554928 FAM214AQ32MH5 1076 aa11.74□□□□□ -0.53
SYNE2-214ENST00000554928 CDKL4Q5MAI5 379 aa11.74□□□□□ -0.53
SYNE2-214ENST00000554928 YOD1Q5VVQ6 348 aaPredicted RBP11.74□□□□□ -0.53
SYNE2-214ENST00000554928 ATG9BQ674R7 924 aa11.74□□□□□ -0.53
SYNE2-214ENST00000554928 TMEM214Q6NUQ4 689 aaKnown RBP11.74□□□□□ -0.53
SYNE2-214ENST00000554928 WDR93Q6P2C0 686 aa11.74□□□□□ -0.53
SYNE2-214ENST00000554928 RPS27LQ71UM5 84 aaKnown RBP11.74□□□□□ -0.53
SYNE2-214ENST00000554928 OVCH1Q7RTY7 1134 aa11.74□□□□□ -0.53
SYNE2-214ENST00000554928 SYVN1Q86TM6 617 aa11.74□□□□□ -0.53
SYNE2-214ENST00000554928 TCAIMQ8N3R3 496 aa11.74□□□□□ -0.53
SYNE2-214ENST00000554928 PTGR2Q8N8N7 351 aaPredicted RBP11.74□□□□□ -0.53
SYNE2-214ENST00000554928 CREB3L4Q8TEY5 395 aa11.74□□□□□ -0.53
SYNE2-214ENST00000554928 SLC13A3Q8WWT9 602 aa11.74□□□□□ -0.53
SYNE2-214ENST00000554928 ZBTB9Q96C00 473 aa11.74□□□□□ -0.53
SYNE2-214ENST00000554928 SCYL1Q96KG9 808 aa11.74□□□□□ -0.53
SYNE2-214ENST00000554928 DPH2Q9BQC3 489 aaPredicted RBP11.74□□□□□ -0.53
SYNE2-214ENST00000554928 TRIM55Q9BYV6 548 aa11.74□□□□□ -0.53
SYNE2-214ENST00000554928 C12orf65Q9H3J6 166 aaKnown RBP11.74□□□□□ -0.53
SYNE2-214ENST00000554928 KLHL31Q9H511 634 aa11.74□□□□□ -0.53
SYNE2-214ENST00000554928 SOX17Q9H6I2 414 aaPredicted RBP11.74□□□□□ -0.53
SYNE2-214ENST00000554928 TMEM216Q9P0N5 145 aa11.74□□□□□ -0.53
SYNE2-214ENST00000554928 MDC1Q14676 2089 aaKnown RBP11.74□□□□□ -0.53
SYNE2-214ENST00000554928 VSTM2BA6NLU5 285 aa11.73□□□□□ -0.53
SYNE2-214ENST00000554928 SGK494L7N484 410 aa11.73□□□□□ -0.53
SYNE2-214ENST00000554928 NDUFS4O43181 175 aa11.73□□□□□ -0.53
SYNE2-214ENST00000554928 JRKO75564 520 aa11.73□□□□□ -0.53
SYNE2-214ENST00000554928 DNAJB5O75953 348 aa11.73□□□□□ -0.53
SYNE2-214ENST00000554928 IPO13O94829 963 aaKnown RBP11.73□□□□□ -0.53
SYNE2-214ENST00000554928 GFAPP14136 432 aa11.73□□□□□ -0.53
SYNE2-214ENST00000554928 GNAZP19086 355 aa11.73□□□□□ -0.53
SYNE2-214ENST00000554928 FBLP22087 321 aaKnown RBP11.73□□□□□ -0.53
SYNE2-214ENST00000554928 OTX2P32243 289 aa11.73□□□□□ -0.53
SYNE2-214ENST00000554928 HNF4AP41235 474 aa11.73□□□□□ -0.53
SYNE2-214ENST00000554928 RHDQ02161 417 aa11.73□□□□□ -0.53
SYNE2-214ENST00000554928 CHIT1Q13231 466 aa11.73□□□□□ -0.53
SYNE2-214ENST00000554928 VWA2Q5GFL6 755 aa11.73□□□□□ -0.53
SYNE2-214ENST00000554928 SH2D5Q6ZV89 423 aa11.73□□□□□ -0.53
SYNE2-214ENST00000554928 LRRC70Q7Z2Q7 622 aa11.73□□□□□ -0.53
SYNE2-214ENST00000554928 CCDC91Q7Z6B0 441 aa11.73□□□□□ -0.53
SYNE2-214ENST00000554928 LAPTM4BQ86VI4 370 aa11.73□□□□□ -0.53
SYNE2-214ENST00000554928 TEX9Q8N6V9 391 aa11.73□□□□□ -0.53
SYNE2-214ENST00000554928 OR5T3Q8NGG3 340 aa11.73□□□□□ -0.53
SYNE2-214ENST00000554928 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.73□□□□□ -0.53
SYNE2-214ENST00000554928 COL26A1Q96A83 441 aa11.73□□□□□ -0.53
SYNE2-214ENST00000554928 PHF21BQ96EK2 531 aa11.73□□□□□ -0.53
SYNE2-214ENST00000554928 THAP11Q96EK4 314 aa11.73□□□□□ -0.53
SYNE2-214ENST00000554928 MMABQ96EY8 250 aaPredicted RBP11.73□□□□□ -0.53
SYNE2-214ENST00000554928 NSUN5Q96P11 429 aaKnown RBP11.73□□□□□ -0.53
SYNE2-214ENST00000554928 SMG1Q96Q15 3661 aaKnown RBP11.73□□□□□ -0.53
SYNE2-214ENST00000554928 UBL7Q96S82 380 aaPredicted RBP11.73□□□□□ -0.53
SYNE2-214ENST00000554928 AIF1LQ9BQI0 150 aa11.73□□□□□ -0.53
SYNE2-214ENST00000554928 CNOT10Q9H9A5 744 aaKnown RBP11.73□□□□□ -0.53
SYNE2-214ENST00000554928 ZNF304Q9HCX3 659 aa11.73□□□□□ -0.53
SYNE2-214ENST00000554928 FETUBQ9UGM5 382 aa11.73□□□□□ -0.53
SYNE2-214ENST00000554928 GPN3Q9UHW5 284 aaPredicted RBP11.73□□□□□ -0.53
SYNE2-214ENST00000554928 ZFP69BQ9UJL9 534 aa11.73□□□□□ -0.53
SYNE2-214ENST00000554928 ZNF490Q9ULM2 529 aaPredicted RBP11.73□□□□□ -0.53
SYNE2-214ENST00000554928 ATRXP46100 2492 aa11.72□□□□□ -0.53
SYNE2-214ENST00000554928 IQANK1A0A1B0GTG1 560 aa11.72□□□□□ -0.53
SYNE2-214ENST00000554928 C2orf72A6NCS6 295 aa11.72□□□□□ -0.53
SYNE2-214ENST00000554928 OR2W5A6NFC9 320 aa11.72□□□□□ -0.53
SYNE2-214ENST00000554928 ARGFXA6NJG6 315 aa11.72□□□□□ -0.53
SYNE2-214ENST00000554928 SYCE1LA8MT33 242 aa11.72□□□□□ -0.53
SYNE2-214ENST00000554928 K7EPI3 171 aa11.72□□□□□ -0.53
SYNE2-214ENST00000554928 ERVH48-1M5A8F1 160 aa11.72□□□□□ -0.53
SYNE2-214ENST00000554928 ATXN7O15265 892 aaPredicted RBP11.72□□□□□ -0.53
SYNE2-214ENST00000554928 ALOX12BO75342 701 aa11.72□□□□□ -0.53
SYNE2-214ENST00000554928 RDH16O75452 317 aa11.72□□□□□ -0.53
SYNE2-214ENST00000554928 GRK3P35626 688 aa11.72□□□□□ -0.53
SYNE2-214ENST00000554928 OLR1P78380 273 aa11.72□□□□□ -0.53
SYNE2-214ENST00000554928 MC1RQ01726 317 aa11.72□□□□□ -0.53
SYNE2-214ENST00000554928 ATP1A4Q13733 1029 aa11.72□□□□□ -0.53
SYNE2-214ENST00000554928 CRTC2Q53ET0 693 aaPredicted RBP11.72□□□□□ -0.53
SYNE2-214ENST00000554928 XKR6Q5GH73 641 aa11.72□□□□□ -0.53
SYNE2-214ENST00000554928 GARNL3Q5VVW2 1013 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms