RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 ARL13AQ5H913 290 aaPredicted RBP11.93□□□□□ -0.5
SHMT2-214ENST00000554604 CFAP157Q5JU67 520 aa11.93□□□□□ -0.5
SHMT2-214ENST00000554604 PLEKHS1Q5SXH7 462 aa11.93□□□□□ -0.5
SHMT2-214ENST00000554604 METTL21CQ5VZV1 264 aa11.93□□□□□ -0.5
SHMT2-214ENST00000554604 TMEM207Q6UWW9 146 aa11.93□□□□□ -0.5
SHMT2-214ENST00000554604 KIRREL3Q8IZU9 778 aa11.93□□□□□ -0.5
SHMT2-214ENST00000554604 C2orf73Q8N5S3 287 aaPredicted RBP11.93□□□□□ -0.5
SHMT2-214ENST00000554604 C9orf43Q8TAL5 461 aaPredicted RBP11.93□□□□□ -0.5
SHMT2-214ENST00000554604 ANKRD49Q8WVL7 239 aa11.93□□□□□ -0.5
SHMT2-214ENST00000554604 RAD51AP1Q96B01 352 aa11.93□□□□□ -0.5
SHMT2-214ENST00000554604 FAM136AQ96C01 138 aa11.93□□□□□ -0.5
SHMT2-214ENST00000554604 LRFN5Q96NI6 719 aa11.93□□□□□ -0.5
SHMT2-214ENST00000554604 BIRC8Q96P09 236 aa11.93□□□□□ -0.5
SHMT2-214ENST00000554604 BTBD10Q9BSF8 475 aa11.93□□□□□ -0.5
SHMT2-214ENST00000554604 RAB11FIP5Q9BXF6 653 aa11.93□□□□□ -0.5
SHMT2-214ENST00000554604 CHST8Q9H2A9 424 aa11.93□□□□□ -0.5
SHMT2-214ENST00000554604 CCDC68Q9H2F9 335 aa11.93□□□□□ -0.5
SHMT2-214ENST00000554604 FAM60AQ9NP50 221 aa11.93□□□□□ -0.5
SHMT2-214ENST00000554604 TAGLN3Q9UI15 199 aa11.93□□□□□ -0.5
SHMT2-214ENST00000554604 TSR3Q9UJK0 312 aaKnown RBP11.93□□□□□ -0.5
SHMT2-214ENST00000554604 FARSAQ9Y285 508 aaKnown RBP11.93□□□□□ -0.5
SHMT2-214ENST00000554604 MAN2B2Q9Y2E5 1009 aa11.93□□□□□ -0.5
SHMT2-214ENST00000554604 KCNMB2Q9Y691 235 aa11.93□□□□□ -0.5
SHMT2-214ENST00000554604 TENM4Q6N022 2769 aa11.93□□□□□ -0.5
SHMT2-214ENST00000554604 MDC1Q14676 2089 aaKnown RBP11.93□□□□□ -0.5
SHMT2-214ENST00000554604 A8MT66 165 aa11.92□□□□□ -0.5
SHMT2-214ENST00000554604 HDAC3O15379 428 aa11.92□□□□□ -0.5
SHMT2-214ENST00000554604 ZNF749O43361 778 aa11.92□□□□□ -0.5
SHMT2-214ENST00000554604 NIPSNAP2O75323 286 aa11.92□□□□□ -0.5
SHMT2-214ENST00000554604 IPO13O94829 963 aaKnown RBP11.92□□□□□ -0.5
SHMT2-214ENST00000554604 ATP6V1G2O95670 118 aa11.92□□□□□ -0.5
SHMT2-214ENST00000554604 RECKO95980 971 aa11.92□□□□□ -0.5
SHMT2-214ENST00000554604 FURINP09958 794 aa11.92□□□□□ -0.5
SHMT2-214ENST00000554604 ZNF37AP17032 561 aaPredicted RBP11.92□□□□□ -0.5
SHMT2-214ENST00000554604 TFEBP19484 476 aa11.92□□□□□ -0.5
SHMT2-214ENST00000554604 AGXTP21549 392 aa11.92□□□□□ -0.5
SHMT2-214ENST00000554604 ALDH18A1P54886 795 aaKnown RBP11.92□□□□□ -0.5
SHMT2-214ENST00000554604 ADARP55265 1226 aaKnown RBP11.92□□□□□ -0.5
SHMT2-214ENST00000554604 SF1Q15637 639 aaKnown RBP11.92□□□□□ -0.5
SHMT2-214ENST00000554604 DEFB110Q30KQ9 67 aa11.92□□□□□ -0.5
SHMT2-214ENST00000554604 CTSL3PQ5NE16 218 aa11.92□□□□□ -0.5
SHMT2-214ENST00000554604 SYVN1Q86TM6 617 aa11.92□□□□□ -0.5
SHMT2-214ENST00000554604 ISCA2Q86U28 154 aa11.92□□□□□ -0.5
SHMT2-214ENST00000554604 TREML1Q86YW5 311 aa11.92□□□□□ -0.5
SHMT2-214ENST00000554604 SYTL1Q8IYJ3 562 aa11.92□□□□□ -0.5
SHMT2-214ENST00000554604 DSELQ8IZU8 1212 aa11.92□□□□□ -0.5
SHMT2-214ENST00000554604 SPATA6LQ8N4H0 392 aa11.92□□□□□ -0.5
SHMT2-214ENST00000554604 LMNTD1Q8N9Z9 388 aa11.92□□□□□ -0.5
SHMT2-214ENST00000554604 OR2L8Q8NGY9 312 aa11.92□□□□□ -0.5
SHMT2-214ENST00000554604 FLVCR1-AS1Q8TAF5 88 aa11.92□□□□□ -0.5
SHMT2-214ENST00000554604 RHEBL1Q8TAI7 183 aa11.92□□□□□ -0.5
SHMT2-214ENST00000554604 MAGEC3Q8TD91 643 aa11.92□□□□□ -0.5
SHMT2-214ENST00000554604 UTP4Q969X6 686 aaKnown RBP11.92□□□□□ -0.5
SHMT2-214ENST00000554604 L3HYPDHQ96EM0 354 aa11.92□□□□□ -0.5
SHMT2-214ENST00000554604 IL17FQ96PD4 163 aa11.92□□□□□ -0.5
SHMT2-214ENST00000554604 CCDC28BQ9BUN5 200 aa11.92□□□□□ -0.5
SHMT2-214ENST00000554604 INTS7Q9NVH2 962 aaKnown RBP11.92□□□□□ -0.5
SHMT2-214ENST00000554604 ARMCX1Q9P291 453 aa11.92□□□□□ -0.5
SHMT2-214ENST00000554604 SNX7Q9UNH6 387 aa11.92□□□□□ -0.5
SHMT2-214ENST00000554604 AP1M2Q9Y6Q5 423 aa11.92□□□□□ -0.5
SHMT2-214ENST00000554604 PRRC2CQ9Y520 2896 aaKnown RBP11.91□□□□□ -0.5
SHMT2-214ENST00000554604 TNRC6AQ8NDV7 1962 aaKnown RBP11.91□□□□□ -0.5
SHMT2-214ENST00000554604 C9J4A7 227 aa11.91□□□□□ -0.5
SHMT2-214ENST00000554604 MKRN2OSH3BPM6 223 aa11.91□□□□□ -0.5
SHMT2-214ENST00000554604 C1orf105O95561 183 aa11.91□□□□□ -0.5
SHMT2-214ENST00000554604 CHRNGP07510 517 aa11.91□□□□□ -0.5
SHMT2-214ENST00000554604 PKMP14618 531 aaKnown RBP11.91□□□□□ -0.5
SHMT2-214ENST00000554604 CD1DP15813 335 aa11.91□□□□□ -0.5
SHMT2-214ENST00000554604 MAGP20916 626 aa11.91□□□□□ -0.5
SHMT2-214ENST00000554604 PRDX6P30041 224 aa11.91□□□□□ -0.5
SHMT2-214ENST00000554604 PEBP1P30086 187 aaKnown RBP11.91□□□□□ -0.5
SHMT2-214ENST00000554604 RORAP35398 523 aa11.91□□□□□ -0.5
SHMT2-214ENST00000554604 BDKRB1P46663 353 aa11.91□□□□□ -0.5
SHMT2-214ENST00000554604 ATP6V0D1P61421 351 aa11.91□□□□□ -0.5
SHMT2-214ENST00000554604 PDAP1Q13442 181 aaKnown RBP11.91□□□□□ -0.5
SHMT2-214ENST00000554604 ZIC1Q15915 447 aa11.91□□□□□ -0.5
SHMT2-214ENST00000554604 UGT8Q16880 541 aa11.91□□□□□ -0.5
SHMT2-214ENST00000554604 PTCHD3Q3KNS1 767 aa11.91□□□□□ -0.5
SHMT2-214ENST00000554604 ZNF517Q6ZMY9 492 aaPredicted RBP11.91□□□□□ -0.5
SHMT2-214ENST00000554604 PTRH1Q86Y79 214 aaKnown RBP11.91□□□□□ -0.5
SHMT2-214ENST00000554604 FAM20CQ8IXL6 584 aa11.91□□□□□ -0.5
SHMT2-214ENST00000554604 ZBTB2Q8N680 514 aa11.91□□□□□ -0.5
SHMT2-214ENST00000554604 ENDOVQ8N8Q3 282 aaKnown RBP11.91□□□□□ -0.5
SHMT2-214ENST00000554604 LINC01555Q8NAE3 123 aa11.91□□□□□ -0.5
SHMT2-214ENST00000554604 THAP4Q8WY91 577 aa11.91□□□□□ -0.5
SHMT2-214ENST00000554604 ABHD17AQ96GS6 310 aa11.91□□□□□ -0.5
SHMT2-214ENST00000554604 FAR2Q96K12 515 aa11.91□□□□□ -0.5
SHMT2-214ENST00000554604 DPH2Q9BQC3 489 aaPredicted RBP11.91□□□□□ -0.5
SHMT2-214ENST00000554604 TRMOQ9BU70 441 aa11.91□□□□□ -0.5
SHMT2-214ENST00000554604 NLNQ9BYT8 704 aa11.91□□□□□ -0.5
SHMT2-214ENST00000554604 DERL2Q9GZP9 239 aa11.91□□□□□ -0.5
SHMT2-214ENST00000554604 CHRNA10Q9GZZ6 450 aa11.91□□□□□ -0.5
SHMT2-214ENST00000554604 C1orf21Q9H246 121 aa11.91□□□□□ -0.5
SHMT2-214ENST00000554604 MMADHCQ9H3L0 296 aaPredicted RBP11.91□□□□□ -0.5
SHMT2-214ENST00000554604 EML4Q9HC35 981 aaKnown RBP11.91□□□□□ -0.5
SHMT2-214ENST00000554604 ZNF71Q9NQZ8 489 aaPredicted RBP11.91□□□□□ -0.5
SHMT2-214ENST00000554604 TAS2R13Q9NYV9 303 aa11.91□□□□□ -0.5
SHMT2-214ENST00000554604 PLCL2Q9UPR0 1127 aa11.91□□□□□ -0.5
SHMT2-214ENST00000554604 STK38LQ9Y2H1 464 aa11.91□□□□□ -0.5
SHMT2-214ENST00000554604 KLHL20Q9Y2M5 609 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms