RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 LANCL3Q6ZV70 420 aa17.72■□□□□ 0.43
CPSF2-203ENST00000554290 FJX1Q86VR8 437 aa17.72■□□□□ 0.43
CPSF2-203ENST00000554290 SLC26A11Q86WA9 606 aa17.72■□□□□ 0.43
CPSF2-203ENST00000554290 TBC1D19Q8N5T2 526 aa17.72■□□□□ 0.43
CPSF2-203ENST00000554290 KCT2Q8NC54 265 aa17.72■□□□□ 0.43
CPSF2-203ENST00000554290 ZCCHC10Q8TBK6 192 aa17.72■□□□□ 0.43
CPSF2-203ENST00000554290 RELTQ969Z4 430 aa17.72■□□□□ 0.43
CPSF2-203ENST00000554290 LINGO1Q96FE5 620 aa17.72■□□□□ 0.43
CPSF2-203ENST00000554290 ZNF354BQ96LW1 612 aa17.72■□□□□ 0.43
CPSF2-203ENST00000554290 ABI3Q9P2A4 366 aa17.72■□□□□ 0.43
CPSF2-203ENST00000554290 SH2B3Q9UQQ2 575 aa17.72■□□□□ 0.43
CPSF2-203ENST00000554290 SLC22A7Q9Y694 548 aa17.72■□□□□ 0.43
CPSF2-203ENST00000554290 IGHV3-20A0A0C4DH32 117 aa17.71■□□□□ 0.43
CPSF2-203ENST00000554290 CES2O00748 559 aa17.71■□□□□ 0.43
CPSF2-203ENST00000554290 LCMT2O60294 686 aaKnown RBP17.71■□□□□ 0.43
CPSF2-203ENST00000554290 NPPBP16860 134 aa17.71■□□□□ 0.43
CPSF2-203ENST00000554290 GABRB3P28472 473 aa17.71■□□□□ 0.43
CPSF2-203ENST00000554290 CCR8P51685 355 aa17.71■□□□□ 0.43
CPSF2-203ENST00000554290 TDGF1P3P51864 188 aa17.71■□□□□ 0.43
CPSF2-203ENST00000554290 AP1S2P56377 157 aa17.71■□□□□ 0.43
CPSF2-203ENST00000554290 KCNK10P57789 538 aa17.71■□□□□ 0.43
CPSF2-203ENST00000554290 DHX9Q08211 1270 aaKnown RBP17.71■□□□□ 0.43
CPSF2-203ENST00000554290 PDAP1Q13442 181 aaKnown RBP17.71■□□□□ 0.43
CPSF2-203ENST00000554290 EXT1Q16394 746 aa17.71■□□□□ 0.43
CPSF2-203ENST00000554290 PHKG1Q16816 387 aa17.71■□□□□ 0.43
CPSF2-203ENST00000554290 RBM20Q5T481 1227 aaKnown RBP17.71■□□□□ 0.43
CPSF2-203ENST00000554290 C1QL3Q5VWW1 255 aa17.71■□□□□ 0.43
CPSF2-203ENST00000554290 DUPD1Q68J44 220 aa17.71■□□□□ 0.43
CPSF2-203ENST00000554290 GFRALQ6UXV0 394 aa17.71■□□□□ 0.43
CPSF2-203ENST00000554290 ANKRD37Q7Z713 158 aa17.71■□□□□ 0.43
CPSF2-203ENST00000554290 GALNT7Q86SF2 657 aa17.71■□□□□ 0.43
CPSF2-203ENST00000554290 CNTN4Q8IWV2 1026 aa17.71■□□□□ 0.43
CPSF2-203ENST00000554290 SLC35F6Q8N357 371 aa17.71■□□□□ 0.43
CPSF2-203ENST00000554290 MFSD9Q8NBP5 474 aa17.71■□□□□ 0.43
CPSF2-203ENST00000554290 CERS2Q96G23 380 aa17.71■□□□□ 0.43
CPSF2-203ENST00000554290 ARL15Q9NXU5 204 aa17.71■□□□□ 0.43
CPSF2-203ENST00000554290 NAALAD2Q9Y3Q0 740 aa17.71■□□□□ 0.43
CPSF2-203ENST00000554290 CENPEQ02224 2701 aa17.71■□□□□ 0.42
CPSF2-203ENST00000554290 RDH16O75452 317 aa17.7■□□□□ 0.42
CPSF2-203ENST00000554290 SKP1P63208 163 aa17.7■□□□□ 0.42
CPSF2-203ENST00000554290 ACTN3Q08043 901 aaPredicted RBP17.7■□□□□ 0.42
CPSF2-203ENST00000554290 HERC3Q15034 1050 aa17.7■□□□□ 0.42
CPSF2-203ENST00000554290 BBS9Q3SYG4 887 aa17.7■□□□□ 0.42
CPSF2-203ENST00000554290 ACER2Q5QJU3 275 aa17.7■□□□□ 0.42
CPSF2-203ENST00000554290 H3F3CQ6NXT2 135 aa17.7■□□□□ 0.42
CPSF2-203ENST00000554290 TMEM207Q6UWW9 146 aa17.7■□□□□ 0.42
CPSF2-203ENST00000554290 PDSS2Q86YH6 399 aa17.7■□□□□ 0.42
CPSF2-203ENST00000554290 ABHD11Q8NFV4 315 aa17.7■□□□□ 0.42
CPSF2-203ENST00000554290 M1APQ8TC57 530 aa17.7■□□□□ 0.42
CPSF2-203ENST00000554290 ATL1Q8WXF7 558 aa17.7■□□□□ 0.42
CPSF2-203ENST00000554290 SNF8Q96H20 258 aa17.7■□□□□ 0.42
CPSF2-203ENST00000554290 OR1F2PQ96R84 312 aa17.7■□□□□ 0.42
CPSF2-203ENST00000554290 KCNK13Q9HB14 408 aa17.7■□□□□ 0.42
CPSF2-203ENST00000554290 PPANQ9NQ55 473 aaKnown RBP17.7■□□□□ 0.42
CPSF2-203ENST00000554290 CORO1CQ9ULV4 474 aaPredicted RBP17.7■□□□□ 0.42
CPSF2-203ENST00000554290 SNX12Q9UMY4 172 aa17.7■□□□□ 0.42
CPSF2-203ENST00000554290 ZSCAN12O43309 604 aa17.69■□□□□ 0.42
CPSF2-203ENST00000554290 OR1F1O43749 312 aa17.69■□□□□ 0.42
CPSF2-203ENST00000554290 BANF1O75531 89 aa17.69■□□□□ 0.42
CPSF2-203ENST00000554290 UNC5CO95185 931 aa17.69■□□□□ 0.42
CPSF2-203ENST00000554290 RBPJQ06330 500 aa17.69■□□□□ 0.42
CPSF2-203ENST00000554290 PWP1Q13610 501 aa17.69■□□□□ 0.42
CPSF2-203ENST00000554290 NSDHLQ15738 373 aa17.69■□□□□ 0.42
CPSF2-203ENST00000554290 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.69■□□□□ 0.42
CPSF2-203ENST00000554290 MSS51Q4VC12 460 aa17.69■□□□□ 0.42
CPSF2-203ENST00000554290 NIPAL1Q6NVV3 410 aa17.69■□□□□ 0.42
CPSF2-203ENST00000554290 PDIK1LQ8N165 341 aa17.69■□□□□ 0.42
CPSF2-203ENST00000554290 PLPP5Q8NEB5 264 aa17.69■□□□□ 0.42
CPSF2-203ENST00000554290 OR4K1Q8NGD4 311 aa17.69■□□□□ 0.42
CPSF2-203ENST00000554290 SLCO2A1Q92959 643 aa17.69■□□□□ 0.42
CPSF2-203ENST00000554290 SARGQ9BW04 601 aa17.69■□□□□ 0.42
CPSF2-203ENST00000554290 SEC14L3Q9UDX4 400 aa17.69■□□□□ 0.42
CPSF2-203ENST00000554290 ENTPD4Q9Y227 616 aa17.69■□□□□ 0.42
CPSF2-203ENST00000554290 VWA7Q9Y334 891 aa17.69■□□□□ 0.42
CPSF2-203ENST00000554290 TRBC2A0A5B9 178 aa17.68■□□□□ 0.42
CPSF2-203ENST00000554290 OR2W5A6NFC9 320 aa17.68■□□□□ 0.42
CPSF2-203ENST00000554290 NDUFS4O43181 175 aa17.68■□□□□ 0.42
CPSF2-203ENST00000554290 TSPAN12O95859 305 aa17.68■□□□□ 0.42
CPSF2-203ENST00000554290 ENO2P09104 434 aaPredicted RBP17.68■□□□□ 0.42
CPSF2-203ENST00000554290 CSHL1Q14406 222 aa17.68■□□□□ 0.42
CPSF2-203ENST00000554290 ABRAXAS2Q15018 415 aa17.68■□□□□ 0.42
CPSF2-203ENST00000554290 MEP1AQ16819 746 aa17.68■□□□□ 0.42
CPSF2-203ENST00000554290 SFT2D3Q587I9 215 aa17.68■□□□□ 0.42
CPSF2-203ENST00000554290 ZNF766Q5HY98 468 aa17.68■□□□□ 0.42
CPSF2-203ENST00000554290 HECTD2Q5U5R9 776 aa17.68■□□□□ 0.42
CPSF2-203ENST00000554290 AMER2Q8N7J2 671 aa17.68■□□□□ 0.42
CPSF2-203ENST00000554290 GPATCH11Q8N954 259 aa17.68■□□□□ 0.42
CPSF2-203ENST00000554290 OR56A3Q8NH54 315 aa17.68■□□□□ 0.42
CPSF2-203ENST00000554290 PYCR2Q96C36 320 aa17.68■□□□□ 0.42
CPSF2-203ENST00000554290 FBXL8Q96CD0 374 aa17.68■□□□□ 0.42
CPSF2-203ENST00000554290 PEX11GQ96HA9 241 aa17.68■□□□□ 0.42
CPSF2-203ENST00000554290 LPAR4Q99677 370 aa17.68■□□□□ 0.42
CPSF2-203ENST00000554290 DDX47Q9H0S4 455 aaKnown RBP17.68■□□□□ 0.42
CPSF2-203ENST00000554290 MMP25Q9NPA2 562 aa17.68■□□□□ 0.42
CPSF2-203ENST00000554290 COPG2Q9UBF2 871 aa17.68■□□□□ 0.42
CPSF2-203ENST00000554290 SUCOQ9UBS9 1254 aaKnown RBP17.68■□□□□ 0.42
CPSF2-203ENST00000554290 PCDHGB6Q9Y5F9 930 aa17.68■□□□□ 0.42
CPSF2-203ENST00000554290 CELSR2Q9HCU4 2923 aa17.68■□□□□ 0.42
CPSF2-203ENST00000554290 ITPR2Q14571 2701 aa17.67■□□□□ 0.42
CPSF2-203ENST00000554290 TRGV8A0A0C4DH27 118 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms