RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 SLC13A3Q8WWT9 602 aa17.24■□□□□ 0.35
SHMT2-206ENST00000553529 TSLPQ969D9 159 aa17.24■□□□□ 0.35
SHMT2-206ENST00000553529 PEX11GQ96HA9 241 aa17.24■□□□□ 0.35
SHMT2-206ENST00000553529 HIST1H2AHQ96KK5 128 aa17.24■□□□□ 0.35
SHMT2-206ENST00000553529 C16orf45Q96MC5 204 aaPredicted RBP17.24■□□□□ 0.35
SHMT2-206ENST00000553529 HIST1H2AJQ99878 128 aa17.24■□□□□ 0.35
SHMT2-206ENST00000553529 TMEM79Q9BSE2 394 aa17.24■□□□□ 0.35
SHMT2-206ENST00000553529 H2AFJQ9BTM1 129 aa17.24■□□□□ 0.35
SHMT2-206ENST00000553529 KLHL31Q9H511 634 aa17.24■□□□□ 0.35
SHMT2-206ENST00000553529 PTGFRNQ9P2B2 879 aa17.24■□□□□ 0.35
SHMT2-206ENST00000553529 RNF14Q9UBS8 474 aa17.24■□□□□ 0.35
SHMT2-206ENST00000553529 NOVA2Q9UNW9 492 aaKnown RBP17.24■□□□□ 0.35
SHMT2-206ENST00000553529 B3GNT3Q9Y2A9 372 aa17.24■□□□□ 0.35
SHMT2-206ENST00000553529 NAALAD2Q9Y3Q0 740 aa17.24■□□□□ 0.35
SHMT2-206ENST00000553529 PCDHGB7Q9Y5F8 929 aa17.24■□□□□ 0.35
SHMT2-206ENST00000553529 KCNE1BA0A087WTH5 132 aa17.23■□□□□ 0.35
SHMT2-206ENST00000553529 PRAMEF4O60810 478 aa17.23■□□□□ 0.35
SHMT2-206ENST00000553529 SEC24DO94855 1032 aaPredicted RBP17.23■□□□□ 0.35
SHMT2-206ENST00000553529 HPP00738 406 aa17.23■□□□□ 0.35
SHMT2-206ENST00000553529 ZNF888P0CJ79 500 aaPredicted RBP17.23■□□□□ 0.35
SHMT2-206ENST00000553529 XCR1P46094 333 aa17.23■□□□□ 0.35
SHMT2-206ENST00000553529 GLRBP48167 497 aa17.23■□□□□ 0.35
SHMT2-206ENST00000553529 HYAL2Q12891 473 aa17.23■□□□□ 0.35
SHMT2-206ENST00000553529 NR6A1Q15406 480 aa17.23■□□□□ 0.35
SHMT2-206ENST00000553529 GARNL3Q5VVW2 1013 aa17.23■□□□□ 0.35
SHMT2-206ENST00000553529 PRAMEF9Q5VWM5 478 aa17.23■□□□□ 0.35
SHMT2-206ENST00000553529 FCRLBQ6BAA4 426 aa17.23■□□□□ 0.35
SHMT2-206ENST00000553529 Q6ZS92 163 aa17.23■□□□□ 0.35
SHMT2-206ENST00000553529 CMC1Q7Z7K0 106 aa17.23■□□□□ 0.35
SHMT2-206ENST00000553529 EFCAB3Q8N7B9 438 aa17.23■□□□□ 0.35
SHMT2-206ENST00000553529 ABHD11Q8NFV4 315 aa17.23■□□□□ 0.35
SHMT2-206ENST00000553529 OR4K1Q8NGD4 311 aa17.23■□□□□ 0.35
SHMT2-206ENST00000553529 SLC5A11Q8WWX8 675 aa17.23■□□□□ 0.35
SHMT2-206ENST00000553529 EXT2Q93063 718 aa17.23■□□□□ 0.35
SHMT2-206ENST00000553529 EGFL8Q99944 293 aa17.23■□□□□ 0.35
SHMT2-206ENST00000553529 LHPPQ9H008 270 aa17.23■□□□□ 0.35
SHMT2-206ENST00000553529 ILKAPQ9H0C8 392 aaPredicted RBP17.23■□□□□ 0.35
SHMT2-206ENST00000553529 GPAMQ9HCL2 828 aa17.23■□□□□ 0.35
SHMT2-206ENST00000553529 MKKSQ9NPJ1 570 aaPredicted RBP17.23■□□□□ 0.35
SHMT2-206ENST00000553529 C5AR2Q9P296 337 aa17.23■□□□□ 0.35
SHMT2-206ENST00000553529 CORO1CQ9ULV4 474 aaPredicted RBP17.23■□□□□ 0.35
SHMT2-206ENST00000553529 G3BP2Q9UN86 482 aaKnown RBP17.23■□□□□ 0.35
SHMT2-206ENST00000553529 PCDHGA10Q9Y5H3 936 aa17.23■□□□□ 0.35
SHMT2-206ENST00000553529 NSG1A0A0A6YYJ2 146 aa17.22■□□□□ 0.35
SHMT2-206ENST00000553529 A0A0G2JN53 185 aa17.22■□□□□ 0.35
SHMT2-206ENST00000553529 FAM159BA6NKW6 160 aa17.22■□□□□ 0.35
SHMT2-206ENST00000553529 TAPBPO15533 448 aa17.22■□□□□ 0.35
SHMT2-206ENST00000553529 MAN1A2O60476 641 aa17.22■□□□□ 0.35
SHMT2-206ENST00000553529 VPS4BO75351 444 aa17.22■□□□□ 0.35
SHMT2-206ENST00000553529 NSA2O95478 260 aaKnown RBP17.22■□□□□ 0.35
SHMT2-206ENST00000553529 PRR35P0CG20 571 aa17.22■□□□□ 0.35
SHMT2-206ENST00000553529 KCNC1P48547 511 aa17.22■□□□□ 0.35
SHMT2-206ENST00000553529 CCR8P51685 355 aa17.22■□□□□ 0.35
SHMT2-206ENST00000553529 RELAQ04206 551 aa17.22■□□□□ 0.35
SHMT2-206ENST00000553529 DLG1Q12959 904 aa17.22■□□□□ 0.35
SHMT2-206ENST00000553529 CALCOCO2Q13137 446 aa17.22■□□□□ 0.35
SHMT2-206ENST00000553529 FAM53BQ14153 422 aa17.22■□□□□ 0.35
SHMT2-206ENST00000553529 KBTBD12Q3ZCT8 623 aa17.22■□□□□ 0.35
SHMT2-206ENST00000553529 MINDY4Q4G0A6 757 aa17.22■□□□□ 0.35
SHMT2-206ENST00000553529 DEFB134Q4QY38 66 aa17.22■□□□□ 0.35
SHMT2-206ENST00000553529 IGFL3Q6UXB1 125 aa17.22■□□□□ 0.35
SHMT2-206ENST00000553529 ATCAYQ86WG3 371 aa17.22■□□□□ 0.35
SHMT2-206ENST00000553529 GABPB2Q8TAK5 448 aaPredicted RBP17.22■□□□□ 0.35
SHMT2-206ENST00000553529 MRRFQ96E11 262 aaKnown RBP17.22■□□□□ 0.35
SHMT2-206ENST00000553529 MVB12AQ96EY5 273 aa17.22■□□□□ 0.35
SHMT2-206ENST00000553529 PDLIM5Q96HC4 596 aaKnown RBP17.22■□□□□ 0.35
SHMT2-206ENST00000553529 RBBP8Q99708 897 aa17.22■□□□□ 0.35
SHMT2-206ENST00000553529 LRRC1Q9BTT6 524 aa17.22■□□□□ 0.35
SHMT2-206ENST00000553529 TGIF2Q9GZN2 237 aa17.22■□□□□ 0.35
SHMT2-206ENST00000553529 LRRC4CQ9HCJ2 640 aa17.22■□□□□ 0.35
SHMT2-206ENST00000553529 VPS4AQ9UN37 437 aa17.22■□□□□ 0.35
SHMT2-206ENST00000553529 CDC14AQ9UNH5 594 aa17.22■□□□□ 0.35
SHMT2-206ENST00000553529 DOPEY2Q9Y3R5 2298 aa17.22■□□□□ 0.35
SHMT2-206ENST00000553529 CPAMD8Q8IZJ3 1885 aa17.21■□□□□ 0.35
SHMT2-206ENST00000553529 BLACEA4D250 179 aa17.21■□□□□ 0.35
SHMT2-206ENST00000553529 WDR47O94967 919 aa17.21■□□□□ 0.35
SHMT2-206ENST00000553529 IGHEP01854 428 aa17.21■□□□□ 0.35
SHMT2-206ENST00000553529 AVPR1BP47901 424 aa17.21■□□□□ 0.35
SHMT2-206ENST00000553529 AP1S2P56377 157 aa17.21■□□□□ 0.35
SHMT2-206ENST00000553529 RAB8AP61006 207 aa17.21■□□□□ 0.35
SHMT2-206ENST00000553529 REEP5Q00765 189 aa17.21■□□□□ 0.35
SHMT2-206ENST00000553529 CBLBQ13191 982 aa17.21■□□□□ 0.35
SHMT2-206ENST00000553529 NDUFA9Q16795 377 aa17.21■□□□□ 0.35
SHMT2-206ENST00000553529 AGAP7PQ5VUJ5 663 aa17.21■□□□□ 0.35
SHMT2-206ENST00000553529 TMEM205Q6UW68 189 aa17.21■□□□□ 0.35
SHMT2-206ENST00000553529 C3orf62Q6ZUJ4 267 aa17.21■□□□□ 0.35
SHMT2-206ENST00000553529 NDUFAF7Q7L592 441 aa17.21■□□□□ 0.35
SHMT2-206ENST00000553529 CTAGE3PQ8IX95 158 aa17.21■□□□□ 0.35
SHMT2-206ENST00000553529 ZADH2Q8N4Q0 377 aa17.21■□□□□ 0.35
SHMT2-206ENST00000553529 PPM1NQ8N819 430 aa17.21■□□□□ 0.35
SHMT2-206ENST00000553529 RHBDF1Q96CC6 855 aa17.21■□□□□ 0.35
SHMT2-206ENST00000553529 AGAP4Q96P64 663 aa17.21■□□□□ 0.35
SHMT2-206ENST00000553529 WDR77Q9BQA1 342 aaPredicted RBP17.21■□□□□ 0.35
SHMT2-206ENST00000553529 PCBD2Q9H0N5 130 aa17.21■□□□□ 0.35
SHMT2-206ENST00000553529 CTNNAL1Q9UBT7 734 aa17.21■□□□□ 0.35
SHMT2-206ENST00000553529 OARD1Q9Y530 152 aa17.21■□□□□ 0.35
SHMT2-206ENST00000553529 LOC102723996A0A087X1L8 192 aa17.2■□□□□ 0.34
SHMT2-206ENST00000553529 FAM227AF5H4B4 570 aa17.2■□□□□ 0.34
SHMT2-206ENST00000553529 WISP2O76076 250 aa17.2■□□□□ 0.34
SHMT2-206ENST00000553529 ALPPP05187 535 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms