RNA–Protein interactions for RNA: ENST00000552545.1

AC055716.2-201, humanhuman

BASIC

Gene AC055716.2, Length 2,441 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055716.2-201ENST00000552545 CACHD1Q5VU97 1274 aa8.36□□□□□ -1.07
AC055716.2-201ENST00000552545 FCRL6Q6DN72 434 aa8.36□□□□□ -1.07
AC055716.2-201ENST00000552545 PAQR7Q86WK9 346 aa8.36□□□□□ -1.07
AC055716.2-201ENST00000552545 PLXDC1Q8IUK5 500 aa8.36□□□□□ -1.07
AC055716.2-201ENST00000552545 LAS2Q8IYD9 372 aa8.36□□□□□ -1.07
AC055716.2-201ENST00000552545 NAT6Q93015 286 aa8.36□□□□□ -1.07
AC055716.2-201ENST00000552545 ZUFSPQ96AP4 578 aa8.36□□□□□ -1.07
AC055716.2-201ENST00000552545 NUDT22Q9BRQ3 303 aa8.36□□□□□ -1.07
AC055716.2-201ENST00000552545 OR51B5Q9H339 312 aa8.36□□□□□ -1.07
AC055716.2-201ENST00000552545 SEMA6CQ9H3T2 930 aa8.36□□□□□ -1.07
AC055716.2-201ENST00000552545 TRBC2A0A5B9 178 aa8.35□□□□□ -1.07
AC055716.2-201ENST00000552545 UBDO15205 165 aa8.35□□□□□ -1.07
AC055716.2-201ENST00000552545 MAP3K7O43318 606 aa8.35□□□□□ -1.07
AC055716.2-201ENST00000552545 CTSVO60911 334 aa8.35□□□□□ -1.07
AC055716.2-201ENST00000552545 VPS4BO75351 444 aa8.35□□□□□ -1.07
AC055716.2-201ENST00000552545 DCTN3O75935 186 aa8.35□□□□□ -1.07
AC055716.2-201ENST00000552545 CKMT1AP12532 417 aa8.35□□□□□ -1.07
AC055716.2-201ENST00000552545 LBPP18428 481 aa8.35□□□□□ -1.07
AC055716.2-201ENST00000552545 RPS6KA2Q15349 733 aa8.35□□□□□ -1.07
AC055716.2-201ENST00000552545 ZIC1Q15915 447 aa8.35□□□□□ -1.07
AC055716.2-201ENST00000552545 DEFB110Q30KQ9 67 aa8.35□□□□□ -1.07
AC055716.2-201ENST00000552545 ZNF425Q6IV72 752 aa8.35□□□□□ -1.07
AC055716.2-201ENST00000552545 FBXO42Q6P3S6 717 aa8.35□□□□□ -1.07
AC055716.2-201ENST00000552545 LARP4Q71RC2 724 aaKnown RBP eCLIP8.35□□□□□ -1.07
AC055716.2-201ENST00000552545 BAHD1Q8TBE0 780 aaPredicted RBP8.35□□□□□ -1.07
AC055716.2-201ENST00000552545 N4BP2L2Q92802 583 aaPredicted RBP8.35□□□□□ -1.07
AC055716.2-201ENST00000552545 TRAPPC9Q96Q05 1148 aa8.35□□□□□ -1.07
AC055716.2-201ENST00000552545 LRRC37BQ96QE4 947 aa8.35□□□□□ -1.07
AC055716.2-201ENST00000552545 CCT7Q99832 543 aa8.35□□□□□ -1.07
AC055716.2-201ENST00000552545 MRPL1Q9BYD6 325 aaKnown RBP8.35□□□□□ -1.07
AC055716.2-201ENST00000552545 LRTM1Q9HBL6 345 aa8.35□□□□□ -1.07
AC055716.2-201ENST00000552545 C1GALT1Q9NS00 363 aa8.35□□□□□ -1.07
AC055716.2-201ENST00000552545 ARMCX1Q9P291 453 aa8.35□□□□□ -1.07
AC055716.2-201ENST00000552545 ZFP69BQ9UJL9 534 aa8.35□□□□□ -1.07
AC055716.2-201ENST00000552545 TRIM33Q9UPN9 1127 aa8.35□□□□□ -1.07
AC055716.2-201ENST00000552545 EP300Q09472 2414 aaPredicted RBP8.35□□□□□ -1.07
AC055716.2-201ENST00000552545 IGHV5-51A0A0C4DH38 117 aa8.35□□□□□ -1.07
AC055716.2-201ENST00000552545 FCHO1O14526 889 aa8.35□□□□□ -1.07
AC055716.2-201ENST00000552545 NDUFS4O43181 175 aa8.35□□□□□ -1.07
AC055716.2-201ENST00000552545 ETHE1O95571 254 aa8.35□□□□□ -1.07
AC055716.2-201ENST00000552545 CD59P13987 128 aa8.35□□□□□ -1.07
AC055716.2-201ENST00000552545 CSF2RBP32927 897 aa8.35□□□□□ -1.07
AC055716.2-201ENST00000552545 MLLT3P42568 568 aaPredicted RBP8.35□□□□□ -1.07
AC055716.2-201ENST00000552545 SCTRP47872 440 aa8.35□□□□□ -1.07
AC055716.2-201ENST00000552545 RAP1GDS1P52306 607 aa8.35□□□□□ -1.07
AC055716.2-201ENST00000552545 SESN3P58005 492 aa8.35□□□□□ -1.07
AC055716.2-201ENST00000552545 RPS15AP62244 130 aaKnown RBP8.35□□□□□ -1.07
AC055716.2-201ENST00000552545 CFHR1Q03591 330 aa8.35□□□□□ -1.07
AC055716.2-201ENST00000552545 TMED1Q13445 227 aa8.35□□□□□ -1.07
AC055716.2-201ENST00000552545 TUBB3Q13509 450 aa8.35□□□□□ -1.07
AC055716.2-201ENST00000552545 UBAP2LQ14157 1087 aaKnown RBP8.35□□□□□ -1.07
AC055716.2-201ENST00000552545 E2F2Q14209 437 aa8.35□□□□□ -1.07
AC055716.2-201ENST00000552545 RFTN2Q52LD8 501 aaPredicted RBP8.35□□□□□ -1.07
AC055716.2-201ENST00000552545 XKR7Q5GH72 579 aa8.35□□□□□ -1.07
AC055716.2-201ENST00000552545 C6orf136Q5SQH8 315 aa8.35□□□□□ -1.07
AC055716.2-201ENST00000552545 TRIM46Q7Z4K8 759 aa8.35□□□□□ -1.07
AC055716.2-201ENST00000552545 NAXDQ8IW45 347 aa8.35□□□□□ -1.07
AC055716.2-201ENST00000552545 CHCHD4Q8N4Q1 142 aa8.35□□□□□ -1.07
AC055716.2-201ENST00000552545 GBP7Q8N8V2 638 aaPredicted RBP8.35□□□□□ -1.07
AC055716.2-201ENST00000552545 C19orf47Q8N9M1 422 aaKnown RBP8.35□□□□□ -1.07
AC055716.2-201ENST00000552545 CDC26Q8NHZ8 85 aa8.35□□□□□ -1.07
AC055716.2-201ENST00000552545 ACTRT2Q8TDY3 377 aa8.35□□□□□ -1.07
AC055716.2-201ENST00000552545 SLC13A3Q8WWT9 602 aa8.35□□□□□ -1.07
AC055716.2-201ENST00000552545 RERGQ96A58 199 aaPredicted RBP8.35□□□□□ -1.07
AC055716.2-201ENST00000552545 APIPQ96GX9 242 aa8.35□□□□□ -1.07
AC055716.2-201ENST00000552545 MAELQ96JY0 434 aaKnown RBP8.35□□□□□ -1.07
AC055716.2-201ENST00000552545 PPP3R2Q96LZ3 170 aa8.35□□□□□ -1.07
AC055716.2-201ENST00000552545 F2RL3Q96RI0 385 aa8.35□□□□□ -1.07
AC055716.2-201ENST00000552545 CCDC28BQ9BUN5 200 aa8.35□□□□□ -1.07
AC055716.2-201ENST00000552545 NMUR2Q9GZQ4 415 aa8.35□□□□□ -1.07
AC055716.2-201ENST00000552545 LRRN3Q9H3W5 708 aa8.35□□□□□ -1.07
AC055716.2-201ENST00000552545 EPB41L1Q9H4G0 881 aa8.35□□□□□ -1.07
AC055716.2-201ENST00000552545 DMRT3Q9NQL9 472 aa8.35□□□□□ -1.07
AC055716.2-201ENST00000552545 STARD5Q9NSY2 213 aa8.35□□□□□ -1.07
AC055716.2-201ENST00000552545 VPS29Q9UBQ0 182 aa8.35□□□□□ -1.07
AC055716.2-201ENST00000552545 POLR3HQ9Y535 204 aaPredicted RBP8.35□□□□□ -1.07
AC055716.2-201ENST00000552545 PCDHGB2Q9Y5G2 931 aa8.35□□□□□ -1.07
AC055716.2-201ENST00000552545 OTOGLQ3ZCN5 2332 aa8.35□□□□□ -1.07
AC055716.2-201ENST00000552545 LOC105369274A0A096LPK9 316 aa8.34□□□□□ -1.07
AC055716.2-201ENST00000552545 A0A0G2JN53 185 aa8.34□□□□□ -1.07
AC055716.2-201ENST00000552545 LOC102723532A0A0G2JNH3 316 aa8.34□□□□□ -1.07
AC055716.2-201ENST00000552545 OR2A25A4D2G3 310 aa8.34□□□□□ -1.07
AC055716.2-201ENST00000552545 TLCD2A6NGC4 264 aa8.34□□□□□ -1.07
AC055716.2-201ENST00000552545 LSM1O15116 133 aaKnown RBP8.34□□□□□ -1.07
AC055716.2-201ENST00000552545 TNFSF14O43557 240 aa8.34□□□□□ -1.07
AC055716.2-201ENST00000552545 FKBP9O95302 570 aa8.34□□□□□ -1.07
AC055716.2-201ENST00000552545 SPTBP11277 2137 aa8.34□□□□□ -1.07
AC055716.2-201ENST00000552545 PNLIPP16233 465 aa8.34□□□□□ -1.07
AC055716.2-201ENST00000552545 CKMT2P17540 419 aa8.34□□□□□ -1.07
AC055716.2-201ENST00000552545 PTX3P26022 381 aaPredicted RBP8.34□□□□□ -1.07
AC055716.2-201ENST00000552545 PIK3CBP42338 1070 aa8.34□□□□□ -1.07
AC055716.2-201ENST00000552545 VSX2P58304 361 aaPredicted RBP8.34□□□□□ -1.07
AC055716.2-201ENST00000552545 ACSM2AQ08AH3 577 aa8.34□□□□□ -1.07
AC055716.2-201ENST00000552545 CSTF3Q12996 717 aaKnown RBP8.34□□□□□ -1.07
AC055716.2-201ENST00000552545 SLC14A1Q13336 389 aa8.34□□□□□ -1.07
AC055716.2-201ENST00000552545 NAA25Q14CX7 972 aa8.34□□□□□ -1.07
AC055716.2-201ENST00000552545 IL23RQ5VWK5 629 aa8.34□□□□□ -1.07
AC055716.2-201ENST00000552545 ACSM2BQ68CK6 577 aa8.34□□□□□ -1.07
AC055716.2-201ENST00000552545 FRMPD2BQ6IN97 320 aa8.34□□□□□ -1.07
AC055716.2-201ENST00000552545 FOXR1Q6PIV2 292 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms