RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 KLF7O75840 302 aaPredicted RBP17.57■□□□□ 0.4
PRPF40B-216ENST00000552301 FURINP09958 794 aa17.57■□□□□ 0.4
PRPF40B-216ENST00000552301 AHRP35869 848 aa17.57■□□□□ 0.4
PRPF40B-216ENST00000552301 POLE2P56282 527 aa17.57■□□□□ 0.4
PRPF40B-216ENST00000552301 SKP1P63208 163 aa17.57■□□□□ 0.4
PRPF40B-216ENST00000552301 PWP1Q13610 501 aa17.57■□□□□ 0.4
PRPF40B-216ENST00000552301 SSPNQ14714 243 aa17.57■□□□□ 0.4
PRPF40B-216ENST00000552301 PFKFB4Q16877 469 aa17.57■□□□□ 0.4
PRPF40B-216ENST00000552301 XKR6Q5GH73 641 aa17.57■□□□□ 0.4
PRPF40B-216ENST00000552301 TECRLQ5HYJ1 363 aa17.57■□□□□ 0.4
PRPF40B-216ENST00000552301 SLCO4C1Q6ZQN7 724 aa17.57■□□□□ 0.4
PRPF40B-216ENST00000552301 PLD6Q8N2A8 252 aaKnown RBP17.57■□□□□ 0.4
PRPF40B-216ENST00000552301 ZNF740Q8NDX6 193 aa17.57■□□□□ 0.4
PRPF40B-216ENST00000552301 TTLQ8NG68 377 aa17.57■□□□□ 0.4
PRPF40B-216ENST00000552301 IP6K3Q96PC2 410 aa17.57■□□□□ 0.4
PRPF40B-216ENST00000552301 MACROD1Q9BQ69 325 aa17.57■□□□□ 0.4
PRPF40B-216ENST00000552301 SLC26A1Q9H2B4 701 aa17.57■□□□□ 0.4
PRPF40B-216ENST00000552301 SPNS1Q9H2V7 528 aa17.57■□□□□ 0.4
PRPF40B-216ENST00000552301 PPCSQ9HAB8 311 aa17.57■□□□□ 0.4
PRPF40B-216ENST00000552301 XPR1Q9UBH6 696 aa17.57■□□□□ 0.4
PRPF40B-216ENST00000552301 TMCO1Q9UM00 188 aa17.57■□□□□ 0.4
PRPF40B-216ENST00000552301 URADA6NGE7 173 aa17.56■□□□□ 0.4
PRPF40B-216ENST00000552301 K7EPI3 171 aa17.56■□□□□ 0.4
PRPF40B-216ENST00000552301 PEX12O00623 359 aa17.56■□□□□ 0.4
PRPF40B-216ENST00000552301 MAP2K7O14733 419 aa17.56■□□□□ 0.4
PRPF40B-216ENST00000552301 CNOT3O75175 753 aaKnown RBP17.56■□□□□ 0.4
PRPF40B-216ENST00000552301 SMIM24O75264 130 aa17.56■□□□□ 0.4
PRPF40B-216ENST00000552301 FAM87AP0C7U9 286 aa17.56■□□□□ 0.4
PRPF40B-216ENST00000552301 SFTPCP11686 197 aa17.56■□□□□ 0.4
PRPF40B-216ENST00000552301 IL1RNP18510 177 aa17.56■□□□□ 0.4
PRPF40B-216ENST00000552301 GCAP28676 217 aa17.56■□□□□ 0.4
PRPF40B-216ENST00000552301 AGTR2P50052 363 aa17.56■□□□□ 0.4
PRPF40B-216ENST00000552301 ALDH18A1P54886 795 aaKnown RBP17.56■□□□□ 0.4
PRPF40B-216ENST00000552301 IRF8Q02556 426 aa17.56■□□□□ 0.4
PRPF40B-216ENST00000552301 LY6DQ14210 128 aa17.56■□□□□ 0.4
PRPF40B-216ENST00000552301 SETDB1Q15047 1291 aa17.56■□□□□ 0.4
PRPF40B-216ENST00000552301 NKG7Q16617 165 aa17.56■□□□□ 0.4
PRPF40B-216ENST00000552301 LINC00303Q3SY05 128 aa17.56■□□□□ 0.4
PRPF40B-216ENST00000552301 SOWAHCQ53LP3 525 aaPredicted RBP17.56■□□□□ 0.4
PRPF40B-216ENST00000552301 PAGE2BQ5JRK9 111 aa17.56■□□□□ 0.4
PRPF40B-216ENST00000552301 TMEM214Q6NUQ4 689 aaKnown RBP17.56■□□□□ 0.4
PRPF40B-216ENST00000552301 TMIGD1Q6UXZ0 262 aa17.56■□□□□ 0.4
PRPF40B-216ENST00000552301 TIFABQ6ZNK6 161 aa17.56■□□□□ 0.4
PRPF40B-216ENST00000552301 KCT2Q8NC54 265 aa17.56■□□□□ 0.4
PRPF40B-216ENST00000552301 TRPV3Q8NET8 790 aa17.56■□□□□ 0.4
PRPF40B-216ENST00000552301 CCT6BQ92526 530 aa17.56■□□□□ 0.4
PRPF40B-216ENST00000552301 MIEF2Q96C03 454 aa17.56■□□□□ 0.4
PRPF40B-216ENST00000552301 TM4SF19Q96DZ7 209 aa17.56■□□□□ 0.4
PRPF40B-216ENST00000552301 PTCD3Q96EY7 689 aaKnown RBP17.56■□□□□ 0.4
PRPF40B-216ENST00000552301 GPR78Q96P69 363 aa17.56■□□□□ 0.4
PRPF40B-216ENST00000552301 EFCAB11Q9BUY7 163 aa17.56■□□□□ 0.4
PRPF40B-216ENST00000552301 PITHD1Q9GZP4 211 aaPredicted RBP17.56■□□□□ 0.4
PRPF40B-216ENST00000552301 ADNPQ9H2P0 1102 aa17.56■□□□□ 0.4
PRPF40B-216ENST00000552301 EHD1Q9H4M9 534 aa17.56■□□□□ 0.4
PRPF40B-216ENST00000552301 SOX17Q9H6I2 414 aaPredicted RBP17.56■□□□□ 0.4
PRPF40B-216ENST00000552301 GEMIN8Q9NWZ8 242 aaKnown RBP17.56■□□□□ 0.4
PRPF40B-216ENST00000552301 TBK1Q9UHD2 729 aa17.56■□□□□ 0.4
PRPF40B-216ENST00000552301 KCNMB2Q9Y691 235 aa17.56■□□□□ 0.4
PRPF40B-216ENST00000552301 ARGFXA6NJG6 315 aa17.55■□□□□ 0.4
PRPF40B-216ENST00000552301 SMIM23A6NLE4 172 aa17.55■□□□□ 0.4
PRPF40B-216ENST00000552301 H0YIG0 161 aa17.55■□□□□ 0.4
PRPF40B-216ENST00000552301 TK2O00142 265 aa17.55■□□□□ 0.4
PRPF40B-216ENST00000552301 FOXS1O43638 330 aa17.55■□□□□ 0.4
PRPF40B-216ENST00000552301 RFPL1O75677 317 aa17.55■□□□□ 0.4
PRPF40B-216ENST00000552301 NSA2O95478 260 aaKnown RBP17.55■□□□□ 0.4
PRPF40B-216ENST00000552301 MTHFD2P13995 350 aa17.55■□□□□ 0.4
PRPF40B-216ENST00000552301 EPB42P16452 691 aa17.55■□□□□ 0.4
PRPF40B-216ENST00000552301 GSTM2P28161 218 aa17.55■□□□□ 0.4
PRPF40B-216ENST00000552301 RRADP55042 308 aa17.55■□□□□ 0.4
PRPF40B-216ENST00000552301 CHIT1Q13231 466 aa17.55■□□□□ 0.4
PRPF40B-216ENST00000552301 LAPTM5Q13571 262 aa17.55■□□□□ 0.4
PRPF40B-216ENST00000552301 HERC3Q15034 1050 aa17.55■□□□□ 0.4
PRPF40B-216ENST00000552301 HIST2H2ACQ16777 129 aaPredicted RBP17.55■□□□□ 0.4
PRPF40B-216ENST00000552301 HIST2H2AA3Q6FI13 130 aa17.55■□□□□ 0.4
PRPF40B-216ENST00000552301 EMBQ6PCB8 327 aa17.55■□□□□ 0.4
PRPF40B-216ENST00000552301 SHISA6Q6ZSJ9 500 aa17.55■□□□□ 0.4
PRPF40B-216ENST00000552301 ABHD13Q7L211 337 aa17.55■□□□□ 0.4
PRPF40B-216ENST00000552301 MRGPREQ86SM8 312 aa17.55■□□□□ 0.4
PRPF40B-216ENST00000552301 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.55■□□□□ 0.4
PRPF40B-216ENST00000552301 PRSS58Q8IYP2 241 aa17.55■□□□□ 0.4
PRPF40B-216ENST00000552301 ARHGEF39Q8N4T4 335 aa17.55■□□□□ 0.4
PRPF40B-216ENST00000552301 OR9A4Q8NGU2 314 aa17.55■□□□□ 0.4
PRPF40B-216ENST00000552301 STT3BQ8TCJ2 826 aa17.55■□□□□ 0.4
PRPF40B-216ENST00000552301 ADAMTS17Q8TE56 1095 aa17.55■□□□□ 0.4
PRPF40B-216ENST00000552301 VPS50Q96JG6 964 aa17.55■□□□□ 0.4
PRPF40B-216ENST00000552301 BBC3Q96PG8 261 aaPredicted RBP17.55■□□□□ 0.4
PRPF40B-216ENST00000552301 SPSB2Q99619 263 aa17.55■□□□□ 0.4
PRPF40B-216ENST00000552301 MRPL57Q9BQC6 102 aaKnown RBP17.55■□□□□ 0.4
PRPF40B-216ENST00000552301 CRB3Q9BUF7 120 aa17.55■□□□□ 0.4
PRPF40B-216ENST00000552301 MRPL46Q9H2W6 279 aaKnown RBP17.55■□□□□ 0.4
PRPF40B-216ENST00000552301 MKKSQ9NPJ1 570 aaPredicted RBP17.55■□□□□ 0.4
PRPF40B-216ENST00000552301 ACSS2Q9NR19 701 aa17.55■□□□□ 0.4
PRPF40B-216ENST00000552301 C14orf105Q9NVL8 296 aa17.55■□□□□ 0.4
PRPF40B-216ENST00000552301 ZNF358Q9NW07 568 aa17.55■□□□□ 0.4
PRPF40B-216ENST00000552301 MRPS2Q9Y399 296 aaKnown RBP17.55■□□□□ 0.4
PRPF40B-216ENST00000552301 MAP4K5Q9Y4K4 846 aa17.55■□□□□ 0.4
PRPF40B-216ENST00000552301 TNPO3Q9Y5L0 923 aaKnown RBP17.55■□□□□ 0.4
PRPF40B-216ENST00000552301 SLC22A7Q9Y694 548 aa17.55■□□□□ 0.4
PRPF40B-216ENST00000552301 CCDC88CQ9P219 2028 aa17.55■□□□□ 0.4
PRPF40B-216ENST00000552301 MGAQ8IWI9 3026 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms