RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 CLECL1Q8IZS7 167 aa18.88■□□□□ 0.61
SSH1-209ENST00000551165 MMP21Q8N119 569 aa18.88■□□□□ 0.61
SSH1-209ENST00000551165 KIR3DX1Q9H7L2 352 aa18.88■□□□□ 0.61
SSH1-209ENST00000551165 COPS7BQ9H9Q2 264 aaPredicted RBP18.88■□□□□ 0.61
SSH1-209ENST00000551165 TRNAU1APQ9NX07 287 aaKnown RBP18.88■□□□□ 0.61
SSH1-209ENST00000551165 PCDHB11Q9Y5F2 797 aa18.88■□□□□ 0.61
SSH1-209ENST00000551165 SPTY2D1-AS1A0A0U1RR47 76 aa18.88■□□□□ 0.61
SSH1-209ENST00000551165 TCRBV3S1A0A5B6 114 aa18.88■□□□□ 0.61
SSH1-209ENST00000551165 STK25O00506 426 aa18.88■□□□□ 0.61
SSH1-209ENST00000551165 HOXB9P17482 250 aaPredicted RBP18.88■□□□□ 0.61
SSH1-209ENST00000551165 OXTRP30559 389 aa18.88■□□□□ 0.61
SSH1-209ENST00000551165 KIR3DL1P43629 444 aa18.88■□□□□ 0.61
SSH1-209ENST00000551165 RHDQ02161 417 aa18.88■□□□□ 0.61
SSH1-209ENST00000551165 C1orf61Q13536 156 aa18.88■□□□□ 0.61
SSH1-209ENST00000551165 METTL4Q8N3J2 472 aa18.88■□□□□ 0.61
SSH1-209ENST00000551165 PUM2Q8TB72 1066 aaKnown RBP eCLIP18.88■□□□□ 0.61
SSH1-209ENST00000551165 UBE2E3Q969T4 207 aa18.88■□□□□ 0.61
SSH1-209ENST00000551165 METTL2AQ96IZ6 378 aaKnown RBP18.88■□□□□ 0.61
SSH1-209ENST00000551165 ZNF583Q96ND8 569 aa18.88■□□□□ 0.61
SSH1-209ENST00000551165 RHBGQ9H310 441 aa18.88■□□□□ 0.61
SSH1-209ENST00000551165 TBC1D17Q9HA65 648 aa18.88■□□□□ 0.61
SSH1-209ENST00000551165 COLEC10Q9Y6Z7 277 aa18.88■□□□□ 0.61
SSH1-209ENST00000551165 ANKDD1BA6NHY2 528 aa18.87■□□□□ 0.61
SSH1-209ENST00000551165 BTN3A3O00478 584 aa18.87■□□□□ 0.61
SSH1-209ENST00000551165 PLPP1O14494 284 aa18.87■□□□□ 0.61
SSH1-209ENST00000551165 PPM1DO15297 605 aa18.87■□□□□ 0.61
SSH1-209ENST00000551165 F3P13726 295 aa18.87■□□□□ 0.61
SSH1-209ENST00000551165 EEFSECP57772 596 aaKnown RBP18.87■□□□□ 0.61
SSH1-209ENST00000551165 RUNDC3AQ59EK9 446 aa18.87■□□□□ 0.61
SSH1-209ENST00000551165 AMIGO1Q86WK6 493 aa18.87■□□□□ 0.61
SSH1-209ENST00000551165 LCN9Q8WX39 176 aa18.87■□□□□ 0.61
SSH1-209ENST00000551165 PKP2Q99959 881 aa18.87■□□□□ 0.61
SSH1-209ENST00000551165 KCNH6Q9H252 994 aa18.87■□□□□ 0.61
SSH1-209ENST00000551165 AASDHPPTQ9NRN7 309 aa18.87■□□□□ 0.61
SSH1-209ENST00000551165 DMTF1Q9Y222 760 aa18.87■□□□□ 0.61
SSH1-209ENST00000551165 MAN2B2Q9Y2E5 1009 aa18.87■□□□□ 0.61
SSH1-209ENST00000551165 DGKBQ9Y6T7 804 aa18.87■□□□□ 0.61
SSH1-209ENST00000551165 PRSS51A0A1B0GVH4 220 aa18.86■□□□□ 0.61
SSH1-209ENST00000551165 SCAMP2O15127 329 aaKnown RBP18.86■□□□□ 0.61
SSH1-209ENST00000551165 NVLO15381 856 aaKnown RBP18.86■□□□□ 0.61
SSH1-209ENST00000551165 TNFP01375 233 aa18.86■□□□□ 0.61
SSH1-209ENST00000551165 PTX3P26022 381 aaPredicted RBP18.86■□□□□ 0.61
SSH1-209ENST00000551165 PEX2P28328 305 aa18.86■□□□□ 0.61
SSH1-209ENST00000551165 PRSS53Q2L4Q9 553 aa18.86■□□□□ 0.61
SSH1-209ENST00000551165 MUM1Q2TAK8 710 aa18.86■□□□□ 0.61
SSH1-209ENST00000551165 ZNF385BQ569K4 471 aa18.86■□□□□ 0.61
SSH1-209ENST00000551165 KIAA1614Q5VZ46 1190 aa18.86■□□□□ 0.61
SSH1-209ENST00000551165 SLC9B2Q86UD5 537 aa18.86■□□□□ 0.61
SSH1-209ENST00000551165 FAM9CQ8IZT9 166 aa18.86■□□□□ 0.61
SSH1-209ENST00000551165 PQLC1Q8N2U9 271 aa18.86■□□□□ 0.61
SSH1-209ENST00000551165 OR2L3Q8NG85 312 aa18.86■□□□□ 0.61
SSH1-209ENST00000551165 OR10A6Q8NH74 314 aa18.86■□□□□ 0.61
SSH1-209ENST00000551165 CANT1Q8WVQ1 401 aa18.86■□□□□ 0.61
SSH1-209ENST00000551165 CXorf40BQ96DE9 158 aa18.86■□□□□ 0.61
SSH1-209ENST00000551165 THUMPD3Q9BV44 507 aaKnown RBP18.86■□□□□ 0.61
SSH1-209ENST00000551165 MS4A8Q9BY19 250 aa18.86■□□□□ 0.61
SSH1-209ENST00000551165 ZNF717Q9BY31 904 aaPredicted RBP18.86■□□□□ 0.61
SSH1-209ENST00000551165 AICDAQ9GZX7 198 aa18.86■□□□□ 0.61
SSH1-209ENST00000551165 GPR27Q9NS67 375 aa18.86■□□□□ 0.61
SSH1-209ENST00000551165 BCAP29Q9UHQ4 241 aa18.86■□□□□ 0.61
SSH1-209ENST00000551165 TSC22D4Q9Y3Q8 395 aa18.86■□□□□ 0.61
SSH1-209ENST00000551165 HEBP2Q9Y5Z4 205 aa18.86■□□□□ 0.61
SSH1-209ENST00000551165 ZNF217O75362 1048 aa18.86■□□□□ 0.61
SSH1-209ENST00000551165 WNT1P04628 370 aa18.86■□□□□ 0.61
SSH1-209ENST00000551165 DCNP07585 359 aaKnown RBP18.86■□□□□ 0.61
SSH1-209ENST00000551165 HRH2P25021 359 aa18.86■□□□□ 0.61
SSH1-209ENST00000551165 CYP4F3Q08477 520 aa18.86■□□□□ 0.61
SSH1-209ENST00000551165 SLC14A1Q13336 389 aa18.86■□□□□ 0.61
SSH1-209ENST00000551165 ABCA7Q8IZY2 2146 aa18.86■□□□□ 0.61
SSH1-209ENST00000551165 ITCHQ96J02 903 aa18.86■□□□□ 0.61
SSH1-209ENST00000551165 DPH7Q9BTV6 452 aa18.86■□□□□ 0.61
SSH1-209ENST00000551165 RAB11FIP5Q9BXF6 653 aa18.86■□□□□ 0.61
SSH1-209ENST00000551165 MRPS30Q9NP92 439 aaKnown RBP18.86■□□□□ 0.61
SSH1-209ENST00000551165 C15orf38-AP3S2A0A0A6YYH1 394 aa18.85■□□□□ 0.61
SSH1-209ENST00000551165 ISM1B1AKI9 464 aa18.85■□□□□ 0.61
SSH1-209ENST00000551165 CHRM5P08912 532 aaPredicted RBP18.85■□□□□ 0.61
SSH1-209ENST00000551165 ILF3Q12906 894 aaKnown RBP eCLIP18.85■□□□□ 0.61
SSH1-209ENST00000551165 PRRT3Q5FWE3 981 aa18.85■□□□□ 0.61
SSH1-209ENST00000551165 LRIF1Q5T3J3 769 aa18.85■□□□□ 0.61
SSH1-209ENST00000551165 C10orf62Q5T681 223 aaPredicted RBP18.85■□□□□ 0.61
SSH1-209ENST00000551165 DEPDC1Q5TB30 811 aa18.85■□□□□ 0.61
SSH1-209ENST00000551165 KHDRBS2Q5VWX1 349 aaKnown RBP18.85■□□□□ 0.61
SSH1-209ENST00000551165 IYDQ6PHW0 289 aa18.85■□□□□ 0.61
SSH1-209ENST00000551165 ARPINQ7Z6K5 226 aa18.85■□□□□ 0.61
SSH1-209ENST00000551165 ADGRF3Q8IZF5 1079 aa18.85■□□□□ 0.61
SSH1-209ENST00000551165 OR8J3Q8NGG0 315 aa18.85■□□□□ 0.61
SSH1-209ENST00000551165 GPBAR1Q8TDU6 330 aa18.85■□□□□ 0.61
SSH1-209ENST00000551165 C16orf78Q8WTQ4 265 aa18.85■□□□□ 0.61
SSH1-209ENST00000551165 LRGUKQ96M69 825 aa18.85■□□□□ 0.61
SSH1-209ENST00000551165 TBCDQ9BTW9 1192 aa18.85■□□□□ 0.61
SSH1-209ENST00000551165 LHX9Q9NQ69 397 aa18.85■□□□□ 0.61
SSH1-209ENST00000551165 SIRT5Q9NXA8 310 aa18.85■□□□□ 0.61
SSH1-209ENST00000551165 TAAR2Q9P1P5 351 aa18.85■□□□□ 0.61
SSH1-209ENST00000551165 ACTR3BQ9P1U1 418 aa18.85■□□□□ 0.61
SSH1-209ENST00000551165 LRRC42Q9Y546 428 aa18.85■□□□□ 0.61
SSH1-209ENST00000551165 A0A096LPI6 279 aa18.85■□□□□ 0.61
SSH1-209ENST00000551165 A0A0G2JN53 185 aa18.85■□□□□ 0.61
SSH1-209ENST00000551165 RFXANKO14593 260 aa18.85■□□□□ 0.61
SSH1-209ENST00000551165 HAT1O14929 419 aa18.85■□□□□ 0.61
SSH1-209ENST00000551165 PRMT3O60678 531 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms