RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 CAB39LQ9H9S4 337 aa12.33□□□□□ -0.44
NPAS3-209ENST00000551008 SAYSD1Q9NPB0 183 aa12.33□□□□□ -0.44
NPAS3-209ENST00000551008 ASF1BQ9NVP2 202 aa12.33□□□□□ -0.44
NPAS3-209ENST00000551008 HCN3Q9P1Z3 774 aa12.33□□□□□ -0.44
NPAS3-209ENST00000551008 G3BP2Q9UN86 482 aaKnown RBP12.33□□□□□ -0.44
NPAS3-209ENST00000551008 NOVA2Q9UNW9 492 aaKnown RBP12.33□□□□□ -0.44
NPAS3-209ENST00000551008 MTO1Q9Y2Z2 717 aaKnown RBP12.33□□□□□ -0.44
NPAS3-209ENST00000551008 DIDO1Q9BTC0 2240 aaKnown RBP12.32□□□□□ -0.44
NPAS3-209ENST00000551008 TCRBV9S1A1TA0A576 114 aa12.32□□□□□ -0.44
NPAS3-209ENST00000551008 ZNF860A6NHJ4 632 aa12.32□□□□□ -0.44
NPAS3-209ENST00000551008 H0YIG0 161 aa12.32□□□□□ -0.44
NPAS3-209ENST00000551008 SGK494L7N484 410 aa12.32□□□□□ -0.44
NPAS3-209ENST00000551008 TXNDC9O14530 226 aa12.32□□□□□ -0.44
NPAS3-209ENST00000551008 MAP2K7O14733 419 aa12.32□□□□□ -0.44
NPAS3-209ENST00000551008 PRAMEF4O60810 478 aa12.32□□□□□ -0.44
NPAS3-209ENST00000551008 RDH16O75452 317 aa12.32□□□□□ -0.44
NPAS3-209ENST00000551008 ALPPP05187 535 aa12.32□□□□□ -0.44
NPAS3-209ENST00000551008 PRR35P0CG20 571 aa12.32□□□□□ -0.44
NPAS3-209ENST00000551008 SAT1P21673 171 aa12.32□□□□□ -0.44
NPAS3-209ENST00000551008 REEP5Q00765 189 aa12.32□□□□□ -0.44
NPAS3-209ENST00000551008 HYAL2Q12891 473 aa12.32□□□□□ -0.44
NPAS3-209ENST00000551008 UBAP2Q5T6F2 1119 aaKnown RBP12.32□□□□□ -0.44
NPAS3-209ENST00000551008 PRAMEF9Q5VWM5 478 aa12.32□□□□□ -0.44
NPAS3-209ENST00000551008 CAPN13Q6MZZ7 669 aaPredicted RBP12.32□□□□□ -0.44
NPAS3-209ENST00000551008 ASPGQ86U10 573 aa12.32□□□□□ -0.44
NPAS3-209ENST00000551008 PALM2Q8IXS6 379 aa12.32□□□□□ -0.44
NPAS3-209ENST00000551008 KLHDC8AQ8IYD2 350 aa12.32□□□□□ -0.44
NPAS3-209ENST00000551008 CISD2Q8N5K1 135 aaKnown RBP12.32□□□□□ -0.44
NPAS3-209ENST00000551008 ANKRD53Q8N9V6 530 aa12.32□□□□□ -0.44
NPAS3-209ENST00000551008 FBXO25Q8TCJ0 367 aa12.32□□□□□ -0.44
NPAS3-209ENST00000551008 PPP4R1Q8TF05 950 aa12.32□□□□□ -0.44
NPAS3-209ENST00000551008 ANKRD7Q92527 254 aa12.32□□□□□ -0.44
NPAS3-209ENST00000551008 ANP32BQ92688 251 aaKnown RBP12.32□□□□□ -0.44
NPAS3-209ENST00000551008 IMMP1LQ96LU5 166 aa12.32□□□□□ -0.44
NPAS3-209ENST00000551008 TSNARE1Q96NA8 513 aa12.32□□□□□ -0.44
NPAS3-209ENST00000551008 WDR77Q9BQA1 342 aaPredicted RBP12.32□□□□□ -0.44
NPAS3-209ENST00000551008 HAUS8Q9BT25 410 aa12.32□□□□□ -0.44
NPAS3-209ENST00000551008 ZNF700Q9H0M5 742 aa12.32□□□□□ -0.44
NPAS3-209ENST00000551008 SLAMF7Q9NQ25 335 aa12.32□□□□□ -0.44
NPAS3-209ENST00000551008 LANCL2Q9NS86 450 aa12.32□□□□□ -0.44
NPAS3-209ENST00000551008 OARD1Q9Y530 152 aa12.32□□□□□ -0.44
NPAS3-209ENST00000551008 NBPF19A0A087WUL8 3843 aa12.32□□□□□ -0.44
NPAS3-209ENST00000551008 TRBC2A0A5B9 178 aa12.31□□□□□ -0.44
NPAS3-209ENST00000551008 EIF3HO15372 352 aaKnown RBP eCLIP12.31□□□□□ -0.44
NPAS3-209ENST00000551008 PRPF4O43172 522 aaKnown RBP eCLIP12.31□□□□□ -0.44
NPAS3-209ENST00000551008 PHGDHO43175 533 aaKnown RBP12.31□□□□□ -0.44
NPAS3-209ENST00000551008 FAM155BO75949 473 aa12.31□□□□□ -0.44
NPAS3-209ENST00000551008 IPO13O94829 963 aaKnown RBP12.31□□□□□ -0.44
NPAS3-209ENST00000551008 ANXA5P08758 320 aa12.31□□□□□ -0.44
NPAS3-209ENST00000551008 HIST1H2AGP0C0S8 130 aaPredicted RBP12.31□□□□□ -0.44
NPAS3-209ENST00000551008 HIST1H2ADP20671 130 aa12.31□□□□□ -0.44
NPAS3-209ENST00000551008 CASQ1P31415 396 aa12.31□□□□□ -0.44
NPAS3-209ENST00000551008 SCTRP47872 440 aa12.31□□□□□ -0.44
NPAS3-209ENST00000551008 SLC6A12P48065 614 aa12.31□□□□□ -0.44
NPAS3-209ENST00000551008 CCR8P51685 355 aa12.31□□□□□ -0.44
NPAS3-209ENST00000551008 CDKL1Q00532 357 aa12.31□□□□□ -0.44
NPAS3-209ENST00000551008 GUCY2DQ02846 1103 aa12.31□□□□□ -0.44
NPAS3-209ENST00000551008 ZKSCAN8Q15776 578 aaPredicted RBP12.31□□□□□ -0.44
NPAS3-209ENST00000551008 NDUFA9Q16795 377 aa12.31□□□□□ -0.44
NPAS3-209ENST00000551008 NDUFAF7Q7L592 441 aa12.31□□□□□ -0.44
NPAS3-209ENST00000551008 THOC6Q86W42 341 aaKnown RBP12.31□□□□□ -0.44
NPAS3-209ENST00000551008 ATCAYQ86WG3 371 aa12.31□□□□□ -0.44
NPAS3-209ENST00000551008 IQCKQ8N0W5 287 aa12.31□□□□□ -0.44
NPAS3-209ENST00000551008 SPATA6LQ8N4H0 392 aa12.31□□□□□ -0.44
NPAS3-209ENST00000551008 FAM26EQ8N5C1 309 aa12.31□□□□□ -0.44
NPAS3-209ENST00000551008 EFCAB3Q8N7B9 438 aa12.31□□□□□ -0.44
NPAS3-209ENST00000551008 CAMKVQ8NCB2 501 aa12.31□□□□□ -0.44
NPAS3-209ENST00000551008 OR5T3Q8NGG3 340 aa12.31□□□□□ -0.44
NPAS3-209ENST00000551008 OR51Q1Q8NH59 317 aa12.31□□□□□ -0.44
NPAS3-209ENST00000551008 BRIX1Q8TDN6 353 aaKnown RBP12.31□□□□□ -0.44
NPAS3-209ENST00000551008 PYROXD1Q8WU10 500 aa12.31□□□□□ -0.44
NPAS3-209ENST00000551008 SLC13A3Q8WWT9 602 aa12.31□□□□□ -0.44
NPAS3-209ENST00000551008 SLC5A11Q8WWX8 675 aa12.31□□□□□ -0.44
NPAS3-209ENST00000551008 HIST1H2AHQ96KK5 128 aa12.31□□□□□ -0.44
NPAS3-209ENST00000551008 PSMG3-AS1Q96PY0 264 aa12.31□□□□□ -0.44
NPAS3-209ENST00000551008 GPR22Q99680 433 aa12.31□□□□□ -0.44
NPAS3-209ENST00000551008 RBBP8Q99708 897 aa12.31□□□□□ -0.44
NPAS3-209ENST00000551008 HIST1H2AJQ99878 128 aa12.31□□□□□ -0.44
NPAS3-209ENST00000551008 TMEM79Q9BSE2 394 aa12.31□□□□□ -0.44
NPAS3-209ENST00000551008 H2AFJQ9BTM1 129 aa12.31□□□□□ -0.44
NPAS3-209ENST00000551008 YIPF2Q9BWQ6 316 aa12.31□□□□□ -0.44
NPAS3-209ENST00000551008 POPDC3Q9HBV1 291 aa12.31□□□□□ -0.44
NPAS3-209ENST00000551008 MKL2Q9ULH7 1088 aa12.31□□□□□ -0.44
NPAS3-209ENST00000551008 SLC22A14Q9Y267 594 aa12.31□□□□□ -0.44
NPAS3-209ENST00000551008 NAALAD2Q9Y3Q0 740 aa12.31□□□□□ -0.44
NPAS3-209ENST00000551008 SLC22A7Q9Y694 548 aa12.31□□□□□ -0.44
NPAS3-209ENST00000551008 NSG1A0A0A6YYJ2 146 aa12.3□□□□□ -0.44
NPAS3-209ENST00000551008 IGHV3-20A0A0C4DH32 117 aa12.3□□□□□ -0.44
NPAS3-209ENST00000551008 E2F3O00716 465 aa12.3□□□□□ -0.44
NPAS3-209ENST00000551008 TAPBPO15533 448 aa12.3□□□□□ -0.44
NPAS3-209ENST00000551008 OR1F1O43749 312 aa12.3□□□□□ -0.44
NPAS3-209ENST00000551008 SEMA7AO75326 666 aa12.3□□□□□ -0.44
NPAS3-209ENST00000551008 TBX6O95947 436 aaPredicted RBP12.3□□□□□ -0.44
NPAS3-209ENST00000551008 HEXBP07686 556 aa12.3□□□□□ -0.44
NPAS3-209ENST00000551008 ITGAMP11215 1152 aa12.3□□□□□ -0.44
NPAS3-209ENST00000551008 GDF5P43026 501 aa12.3□□□□□ -0.44
NPAS3-209ENST00000551008 XCR1P46094 333 aa12.3□□□□□ -0.44
NPAS3-209ENST00000551008 AVPR1BP47901 424 aa12.3□□□□□ -0.44
NPAS3-209ENST00000551008 RHAGQ02094 409 aa12.3□□□□□ -0.44
NPAS3-209ENST00000551008 DLG1Q12959 904 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms