RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 C16orf52Q8NHV5 167 aa4.78□□□□□ -1.64
SCAF11-214ENST00000550893 SUN3Q8TAQ9 357 aa4.78□□□□□ -1.64
SCAF11-214ENST00000550893 TSACCQ96A04 125 aaPredicted RBP4.78□□□□□ -1.64
SCAF11-214ENST00000550893 IMP4Q96G21 291 aaKnown RBP4.78□□□□□ -1.64
SCAF11-214ENST00000550893 PPP1R16AQ96I34 528 aa4.78□□□□□ -1.64
SCAF11-214ENST00000550893 HIC2Q96JB3 615 aa4.78□□□□□ -1.64
SCAF11-214ENST00000550893 TBATAQ96M53 351 aa4.78□□□□□ -1.64
SCAF11-214ENST00000550893 ZNF641Q96N77 438 aaPredicted RBP4.78□□□□□ -1.64
SCAF11-214ENST00000550893 SIGLEC11Q96RL6 698 aa4.78□□□□□ -1.64
SCAF11-214ENST00000550893 SEMA3CQ99985 751 aa4.78□□□□□ -1.64
SCAF11-214ENST00000550893 APOOQ9BUR5 198 aa4.78□□□□□ -1.64
SCAF11-214ENST00000550893 MLPHQ9BV36 600 aaPredicted RBP4.78□□□□□ -1.64
SCAF11-214ENST00000550893 ABCG8Q9H221 673 aa4.78□□□□□ -1.64
SCAF11-214ENST00000550893 SAP30LQ9HAJ7 183 aa4.78□□□□□ -1.64
SCAF11-214ENST00000550893 NT5MQ9NPB1 228 aa4.78□□□□□ -1.64
SCAF11-214ENST00000550893 NLGN3Q9NZ94 848 aa4.78□□□□□ -1.64
SCAF11-214ENST00000550893 SLC17A4Q9Y2C5 497 aa4.78□□□□□ -1.64
SCAF11-214ENST00000550893 BZW2Q9Y6E2 419 aaKnown RBP4.78□□□□□ -1.64
SCAF11-214ENST00000550893 DGKBQ9Y6T7 804 aa4.78□□□□□ -1.64
SCAF11-214ENST00000550893 MED13Q9UHV7 2174 aa4.78□□□□□ -1.64
SCAF11-214ENST00000550893 A0A087WV48 116 aa4.77□□□□□ -1.65
SCAF11-214ENST00000550893 EME2A4GXA9 379 aaPredicted RBP4.77□□□□□ -1.65
SCAF11-214ENST00000550893 TMEM110-MUSTN1A8MSY1 372 aa4.77□□□□□ -1.65
SCAF11-214ENST00000550893 KPNA5O15131 536 aa4.77□□□□□ -1.65
SCAF11-214ENST00000550893 YKT6O15498 198 aa4.77□□□□□ -1.65
SCAF11-214ENST00000550893 DFNA5O60443 496 aa4.77□□□□□ -1.65
SCAF11-214ENST00000550893 TM7SF2O76062 418 aa4.77□□□□□ -1.65
SCAF11-214ENST00000550893 TRIM16O95361 564 aa4.77□□□□□ -1.65
SCAF11-214ENST00000550893 MT-CYBP00156 380 aaPredicted RBP4.77□□□□□ -1.65
SCAF11-214ENST00000550893 MBPP02686 304 aaPredicted RBP4.77□□□□□ -1.65
SCAF11-214ENST00000550893 PCCBP05166 539 aa4.77□□□□□ -1.65
SCAF11-214ENST00000550893 HOXC4P09017 264 aaPredicted RBP4.77□□□□□ -1.65
SCAF11-214ENST00000550893 H2AFZP0C0S5 128 aa4.77□□□□□ -1.65
SCAF11-214ENST00000550893 PIRTP0C851 137 aa4.77□□□□□ -1.65
SCAF11-214ENST00000550893 CKMT2P17540 419 aa4.77□□□□□ -1.65
SCAF11-214ENST00000550893 AK4P27144 223 aaPredicted RBP4.77□□□□□ -1.65
SCAF11-214ENST00000550893 TEAD1P28347 426 aa4.77□□□□□ -1.65
SCAF11-214ENST00000550893 GALNSP34059 522 aa4.77□□□□□ -1.65
SCAF11-214ENST00000550893 ADRA1AP35348 466 aa4.77□□□□□ -1.65
SCAF11-214ENST00000550893 ETV5P41161 510 aa4.77□□□□□ -1.65
SCAF11-214ENST00000550893 ATXN3P54252 364 aaPredicted RBP4.77□□□□□ -1.65
SCAF11-214ENST00000550893 C21orf59P57076 290 aa4.77□□□□□ -1.65
SCAF11-214ENST00000550893 YPEL5P62699 121 aa4.77□□□□□ -1.65
SCAF11-214ENST00000550893 CDK3Q00526 305 aa4.77□□□□□ -1.65
SCAF11-214ENST00000550893 ZNF91Q05481 1191 aa4.77□□□□□ -1.65
SCAF11-214ENST00000550893 CCDC15Q0P6D6 951 aa4.77□□□□□ -1.65
SCAF11-214ENST00000550893 DNASE1L3Q13609 305 aa4.77□□□□□ -1.65
SCAF11-214ENST00000550893 HNRNPDQ14103 355 aaKnown RBP4.77□□□□□ -1.65
SCAF11-214ENST00000550893 TRIM14Q14142 442 aa4.77□□□□□ -1.65
SCAF11-214ENST00000550893 HLTFQ14527 1009 aaKnown RBP eCLIP4.77□□□□□ -1.65
SCAF11-214ENST00000550893 MESDQ14696 234 aa4.77□□□□□ -1.65
SCAF11-214ENST00000550893 SIX1Q15475 284 aaPredicted RBP4.77□□□□□ -1.65
SCAF11-214ENST00000550893 LRRC38Q5VT99 294 aa4.77□□□□□ -1.65
SCAF11-214ENST00000550893 C11orf63Q6NUN7 778 aa4.77□□□□□ -1.65
SCAF11-214ENST00000550893 H2AFVQ71UI9 128 aa4.77□□□□□ -1.65
SCAF11-214ENST00000550893 HEATR4Q86WZ0 1026 aa4.77□□□□□ -1.65
SCAF11-214ENST00000550893 KRT73Q86Y46 540 aa4.77□□□□□ -1.65
SCAF11-214ENST00000550893 P3H2Q8IVL5 708 aa4.77□□□□□ -1.65
SCAF11-214ENST00000550893 ZNF547Q8IVP9 402 aa4.77□□□□□ -1.65
SCAF11-214ENST00000550893 NAGSQ8N159 534 aa4.77□□□□□ -1.65
SCAF11-214ENST00000550893 RYBPQ8N488 228 aaPredicted RBP4.77□□□□□ -1.65
SCAF11-214ENST00000550893 GPR26Q8NDV2 337 aa4.77□□□□□ -1.65
SCAF11-214ENST00000550893 NAT14Q8WUY8 206 aa4.77□□□□□ -1.65
SCAF11-214ENST00000550893 LRRC46Q96FV0 321 aa4.77□□□□□ -1.65
SCAF11-214ENST00000550893 SCRN2Q96FV2 425 aa4.77□□□□□ -1.65
SCAF11-214ENST00000550893 CCDC114Q96M63 670 aa4.77□□□□□ -1.65
SCAF11-214ENST00000550893 QKIQ96PU8 341 aaKnown RBP eCLIP4.77□□□□□ -1.65
SCAF11-214ENST00000550893 DESI2Q9BSY9 194 aa4.77□□□□□ -1.65
SCAF11-214ENST00000550893 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.77□□□□□ -1.65
SCAF11-214ENST00000550893 CINPQ9BW66 212 aaPredicted RBP4.77□□□□□ -1.65
SCAF11-214ENST00000550893 SLC32A1Q9H598 525 aa4.77□□□□□ -1.65
SCAF11-214ENST00000550893 ATP13A3Q9H7F0 1226 aa4.77□□□□□ -1.65
SCAF11-214ENST00000550893 MRPL47Q9HD33 250 aaKnown RBP4.77□□□□□ -1.65
SCAF11-214ENST00000550893 SPATS2LQ9NUQ6 558 aaKnown RBP4.77□□□□□ -1.65
SCAF11-214ENST00000550893 TMEM184CQ9NVA4 438 aa4.77□□□□□ -1.65
SCAF11-214ENST00000550893 NFKBIL1Q9UBC1 381 aaPredicted RBP4.77□□□□□ -1.65
SCAF11-214ENST00000550893 APOBEC3BQ9UH17 382 aaKnown RBP4.77□□□□□ -1.65
SCAF11-214ENST00000550893 CD84Q9UIB8 345 aa4.77□□□□□ -1.65
SCAF11-214ENST00000550893 CHKBQ9Y259 395 aa4.77□□□□□ -1.65
SCAF11-214ENST00000550893 R3HDM2Q9Y2K5 976 aaKnown RBP4.77□□□□□ -1.65
SCAF11-214ENST00000550893 RAI2Q9Y5P3 530 aa4.77□□□□□ -1.65
SCAF11-214ENST00000550893 ALG6Q9Y672 507 aa4.77□□□□□ -1.65
SCAF11-214ENST00000550893 CSNK1G3Q9Y6M4 447 aa4.77□□□□□ -1.65
SCAF11-214ENST00000550893 HEATR5BQ9P2D3 2071 aa4.76□□□□□ -1.65
SCAF11-214ENST00000550893 LRRD1A4D1F6 860 aa4.76□□□□□ -1.65
SCAF11-214ENST00000550893 TMEM8BA6NDV4 472 aa4.76□□□□□ -1.65
SCAF11-214ENST00000550893 BTNL10A8MVZ5 291 aa4.76□□□□□ -1.65
SCAF11-214ENST00000550893 CDRT15L2A8MXV6 281 aa4.76□□□□□ -1.65
SCAF11-214ENST00000550893 AKR1B15C9JRZ8 316 aaPredicted RBP4.76□□□□□ -1.65
SCAF11-214ENST00000550893 D6RAR5 112 aa4.76□□□□□ -1.65
SCAF11-214ENST00000550893 FPGTO14772 594 aa4.76□□□□□ -1.65
SCAF11-214ENST00000550893 PSTPIP1O43586 416 aa4.76□□□□□ -1.65
SCAF11-214ENST00000550893 CLDN7O95471 211 aa4.76□□□□□ -1.65
SCAF11-214ENST00000550893 LDOC1O95751 146 aaPredicted RBP4.76□□□□□ -1.65
SCAF11-214ENST00000550893 FGF1P05230 155 aa4.76□□□□□ -1.65
SCAF11-214ENST00000550893 GP1BAP07359 652 aa4.76□□□□□ -1.65
SCAF11-214ENST00000550893 TMIGD3P0DMS9 266 aaPredicted RBP4.76□□□□□ -1.65
SCAF11-214ENST00000550893 CCNB1P14635 433 aa4.76□□□□□ -1.65
SCAF11-214ENST00000550893 CCNCP24863 283 aa4.76□□□□□ -1.65
SCAF11-214ENST00000550893 SERPINA4P29622 427 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms