RNA–Protein interactions for RNA: ENST00000550376.5

PRDM4-205, Transcript of PR/SET domain 4, humanhuman

TSL 1 (best)

Gene PRDM4, Length 2,591 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-205ENST00000550376 NELL1Q92832 810 aa20.12■□□□□ 0.81
PRDM4-205ENST00000550376 WDR34Q96EX3 536 aa20.12■□□□□ 0.81
PRDM4-205ENST00000550376 BTBD1Q9H0C5 482 aa20.12■□□□□ 0.81
PRDM4-205ENST00000550376 A0A0G2JN53 185 aa20.12■□□□□ 0.81
PRDM4-205ENST00000550376 A0A1W2PPV9 198 aa20.12■□□□□ 0.81
PRDM4-205ENST00000550376 DLGAP1O14490 977 aa20.12■□□□□ 0.81
PRDM4-205ENST00000550376 EML2O95834 649 aa20.12■□□□□ 0.81
PRDM4-205ENST00000550376 NUDT7P0C024 238 aa20.12■□□□□ 0.81
PRDM4-205ENST00000550376 AK4P27144 223 aaPredicted RBP20.12■□□□□ 0.81
PRDM4-205ENST00000550376 TAS2R50P59544 299 aa20.12■□□□□ 0.81
PRDM4-205ENST00000550376 SRSF11Q05519 484 aaKnown RBP20.12■□□□□ 0.81
PRDM4-205ENST00000550376 AGERQ15109 404 aa20.12■□□□□ 0.81
PRDM4-205ENST00000550376 CAPRIN2Q6IMN6 1127 aaKnown RBP20.12■□□□□ 0.81
PRDM4-205ENST00000550376 ADCK2Q7Z695 626 aa20.12■□□□□ 0.81
PRDM4-205ENST00000550376 FAM129CQ86XR2 697 aa20.12■□□□□ 0.81
PRDM4-205ENST00000550376 GALNT13Q8IUC8 556 aa20.12■□□□□ 0.81
PRDM4-205ENST00000550376 CCL4L1Q8NHW4 92 aa20.12■□□□□ 0.81
PRDM4-205ENST00000550376 F2RL3Q96RI0 385 aa20.12■□□□□ 0.81
PRDM4-205ENST00000550376 TMEM121BQ9BXQ6 578 aaPredicted RBP20.12■□□□□ 0.81
PRDM4-205ENST00000550376 VPS4AQ9UN37 437 aa20.12■□□□□ 0.81
PRDM4-205ENST00000550376 EI24O14681 340 aa20.11■□□□□ 0.81
PRDM4-205ENST00000550376 HSD3B1P14060 373 aa20.11■□□□□ 0.81
PRDM4-205ENST00000550376 NDUFV2P19404 249 aa20.11■□□□□ 0.81
PRDM4-205ENST00000550376 HSD3B2P26439 372 aa20.11■□□□□ 0.81
PRDM4-205ENST00000550376 GRSF1Q12849 480 aaKnown RBP eCLIP20.11■□□□□ 0.81
PRDM4-205ENST00000550376 KRT33BQ14525 404 aa20.11■□□□□ 0.81
PRDM4-205ENST00000550376 SPIN4Q56A73 249 aa20.11■□□□□ 0.81
PRDM4-205ENST00000550376 PPP4R4Q6NUP7 873 aa20.11■□□□□ 0.81
PRDM4-205ENST00000550376 MARVELD2Q8N4S9 558 aa20.11■□□□□ 0.81
PRDM4-205ENST00000550376 TSACCQ96A04 125 aaPredicted RBP20.11■□□□□ 0.81
PRDM4-205ENST00000550376 REPS1Q96D71 796 aa20.11■□□□□ 0.81
PRDM4-205ENST00000550376 SH3GL1Q99961 368 aa20.11■□□□□ 0.81
PRDM4-205ENST00000550376 KLHL20Q9Y2M5 609 aa20.11■□□□□ 0.81
PRDM4-205ENST00000550376 COL6A3P12111 3177 aa20.11■□□□□ 0.81
PRDM4-205ENST00000550376 CREG1O75629 220 aa20.11■□□□□ 0.81
PRDM4-205ENST00000550376 SERPINA1P01009 418 aa20.11■□□□□ 0.81
PRDM4-205ENST00000550376 HOXB3P14651 431 aaPredicted RBP20.11■□□□□ 0.81
PRDM4-205ENST00000550376 ZNF23P17027 643 aa20.11■□□□□ 0.81
PRDM4-205ENST00000550376 MYBPC1Q00872 1141 aa20.11■□□□□ 0.81
PRDM4-205ENST00000550376 COL13A1Q5TAT6 717 aaPredicted RBP20.11■□□□□ 0.81
PRDM4-205ENST00000550376 FAM9CQ8IZT9 166 aa20.11■□□□□ 0.81
PRDM4-205ENST00000550376 MAGEE2Q8TD90 523 aaPredicted RBP20.11■□□□□ 0.81
PRDM4-205ENST00000550376 PDXPQ96GD0 296 aa20.11■□□□□ 0.81
PRDM4-205ENST00000550376 TTYH1Q9H313 450 aaPredicted RBP20.11■□□□□ 0.81
PRDM4-205ENST00000550376 NTN4Q9HB63 628 aa20.11■□□□□ 0.81
PRDM4-205ENST00000550376 SPASTQ9UBP0 616 aa20.11■□□□□ 0.81
PRDM4-205ENST00000550376 PNMA8BQ9ULN7 279 aaPredicted RBP20.11■□□□□ 0.81
PRDM4-205ENST00000550376 PPM1DO15297 605 aa20.1■□□□□ 0.81
PRDM4-205ENST00000550376 LCMT2O60294 686 aaKnown RBP20.1■□□□□ 0.81
PRDM4-205ENST00000550376 LDLRP01130 860 aa20.1■□□□□ 0.81
PRDM4-205ENST00000550376 SERPIND1P05546 499 aa20.1■□□□□ 0.81
PRDM4-205ENST00000550376 ACADMP11310 421 aa20.1■□□□□ 0.81
PRDM4-205ENST00000550376 CCR3P51677 355 aa20.1■□□□□ 0.81
PRDM4-205ENST00000550376 ANKRD34AQ69YU3 496 aa20.1■□□□□ 0.81
PRDM4-205ENST00000550376 ENPP7Q6UWV6 458 aa20.1■□□□□ 0.81
PRDM4-205ENST00000550376 ZNF852Q6ZMS4 543 aa20.1■□□□□ 0.81
PRDM4-205ENST00000550376 CALHM3Q86XJ0 350 aa20.1■□□□□ 0.81
PRDM4-205ENST00000550376 TBC1D21Q8IYX1 336 aa20.1■□□□□ 0.81
PRDM4-205ENST00000550376 HS3ST5Q8IZT8 346 aa20.1■□□□□ 0.81
PRDM4-205ENST00000550376 PAPD5Q8NDF8 572 aaKnown RBP20.1■□□□□ 0.81
PRDM4-205ENST00000550376 OR8J2Q8NGG1 315 aa20.1■□□□□ 0.81
PRDM4-205ENST00000550376 SETD7Q8WTS6 366 aaKnown RBP20.1■□□□□ 0.81
PRDM4-205ENST00000550376 CXorf56Q9H5V9 222 aa20.1■□□□□ 0.81
PRDM4-205ENST00000550376 CNOT11Q9UKZ1 510 aaKnown RBP20.1■□□□□ 0.81
PRDM4-205ENST00000550376 SLC17A4Q9Y2C5 497 aa20.1■□□□□ 0.81
PRDM4-205ENST00000550376 DGKBQ9Y6T7 804 aa20.1■□□□□ 0.81
PRDM4-205ENST00000550376 PGM3O95394 542 aa20.1■□□□□ 0.81
PRDM4-205ENST00000550376 ZNF33BQ06732 778 aa20.1■□□□□ 0.81
PRDM4-205ENST00000550376 C2orf80Q0P641 193 aa20.1■□□□□ 0.81
PRDM4-205ENST00000550376 GAB1Q13480 694 aa20.1■□□□□ 0.81
PRDM4-205ENST00000550376 CCDC85BQ15834 202 aaPredicted RBP20.1■□□□□ 0.81
PRDM4-205ENST00000550376 FOXB2Q5VYV0 432 aa20.1■□□□□ 0.81
PRDM4-205ENST00000550376 KIAA1161Q6NSJ0 714 aa20.1■□□□□ 0.81
PRDM4-205ENST00000550376 LCTLQ6UWM7 567 aa20.1■□□□□ 0.81
PRDM4-205ENST00000550376 MAL2Q969L2 176 aa20.1■□□□□ 0.81
PRDM4-205ENST00000550376 CAMK1GQ96NX5 476 aa20.1■□□□□ 0.81
PRDM4-205ENST00000550376 Q9H521 79 aa20.1■□□□□ 0.81
PRDM4-205ENST00000550376 GORASP2Q9H8Y8 452 aa20.1■□□□□ 0.81
PRDM4-205ENST00000550376 NDRG2Q9UN36 371 aaKnown RBP20.1■□□□□ 0.81
PRDM4-205ENST00000550376 FOXE1O00358 373 aaPredicted RBP20.09■□□□□ 0.81
PRDM4-205ENST00000550376 UMPSP11172 480 aa20.09■□□□□ 0.81
PRDM4-205ENST00000550376 LRRC23Q53EV4 343 aaPredicted RBP20.09■□□□□ 0.81
PRDM4-205ENST00000550376 NHSL2Q5HYW2 709 aa20.09■□□□□ 0.81
PRDM4-205ENST00000550376 ANGPTL8Q6UXH0 198 aa20.09■□□□□ 0.81
PRDM4-205ENST00000550376 C16orf78Q8WTQ4 265 aa20.09■□□□□ 0.81
PRDM4-205ENST00000550376 HMGB4Q8WW32 186 aa20.09■□□□□ 0.81
PRDM4-205ENST00000550376 ABCG4Q9H172 646 aa20.09■□□□□ 0.81
PRDM4-205ENST00000550376 ACSL5Q9ULC5 683 aa20.09■□□□□ 0.81
PRDM4-205ENST00000550376 TCRBV21S2A2A0A5A6 115 aa20.09■□□□□ 0.81
PRDM4-205ENST00000550376 ACPPP15309 386 aa20.09■□□□□ 0.81
PRDM4-205ENST00000550376 CHRNB3Q05901 458 aa20.09■□□□□ 0.81
PRDM4-205ENST00000550376 ATP6AP1Q15904 470 aa20.09■□□□□ 0.81
PRDM4-205ENST00000550376 GOLM1Q8NBJ4 401 aa20.09■□□□□ 0.81
PRDM4-205ENST00000550376 CCDC115Q96NT0 180 aa20.09■□□□□ 0.81
PRDM4-205ENST00000550376 EHD1Q9H4M9 534 aa20.09■□□□□ 0.81
PRDM4-205ENST00000550376 C5AR2Q9P296 337 aa20.09■□□□□ 0.81
PRDM4-205ENST00000550376 IGKV1-8A0A0C4DH67 115 aa20.08■□□□□ 0.81
PRDM4-205ENST00000550376 CACNB4O00305 520 aaPredicted RBP20.08■□□□□ 0.81
PRDM4-205ENST00000550376 CLOCKO15516 846 aa20.08■□□□□ 0.81
PRDM4-205ENST00000550376 OR1F1O43749 312 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms