RNA–Protein interactions for RNA: ENST00000550283.1

RAB5B-208, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5B, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-208ENST00000550283 ATL1Q8WXF7 558 aa10.66□□□□□ -0.7
RAB5B-208ENST00000550283 CABS1Q96KC9 395 aa10.66□□□□□ -0.7
RAB5B-208ENST00000550283 HAUS8Q9BT25 410 aa10.66□□□□□ -0.7
RAB5B-208ENST00000550283 CD244Q9BZW8 370 aa10.66□□□□□ -0.7
RAB5B-208ENST00000550283 SLC7A5P2Q9GIP4 190 aa10.66□□□□□ -0.7
RAB5B-208ENST00000550283 PCBD2Q9H0N5 130 aa10.66□□□□□ -0.7
RAB5B-208ENST00000550283 SOX17Q9H6I2 414 aaPredicted RBP10.66□□□□□ -0.7
RAB5B-208ENST00000550283 NMRAL1Q9HBL8 299 aa10.66□□□□□ -0.7
RAB5B-208ENST00000550283 WWOXQ9NZC7 414 aa10.66□□□□□ -0.7
RAB5B-208ENST00000550283 IFT80Q9P2H3 777 aaPredicted RBP10.66□□□□□ -0.7
RAB5B-208ENST00000550283 ZNF490Q9ULM2 529 aaPredicted RBP10.66□□□□□ -0.7
RAB5B-208ENST00000550283 SRPK3Q9UPE1 567 aa10.66□□□□□ -0.7
RAB5B-208ENST00000550283 SPENQ96T58 3664 aaKnown RBP10.65□□□□□ -0.7
RAB5B-208ENST00000550283 TRBC2A0A5B9 178 aa10.65□□□□□ -0.7
RAB5B-208ENST00000550283 SMIM23A6NLE4 172 aa10.65□□□□□ -0.7
RAB5B-208ENST00000550283 SGK494L7N484 410 aa10.65□□□□□ -0.7
RAB5B-208ENST00000550283 PPP6CO00743 305 aa10.65□□□□□ -0.7
RAB5B-208ENST00000550283 KLK8O60259 260 aa10.65□□□□□ -0.7
RAB5B-208ENST00000550283 CCNT2O60583 730 aaKnown RBP10.65□□□□□ -0.7
RAB5B-208ENST00000550283 PDGFAP04085 211 aa10.65□□□□□ -0.7
RAB5B-208ENST00000550283 SNRPAP09012 282 aaKnown RBP10.65□□□□□ -0.7
RAB5B-208ENST00000550283 C1GALT1C1LP0DN25 315 aa10.65□□□□□ -0.7
RAB5B-208ENST00000550283 CCND1P24385 295 aa10.65□□□□□ -0.7
RAB5B-208ENST00000550283 SLC26A3P40879 764 aa10.65□□□□□ -0.7
RAB5B-208ENST00000550283 HNMTP50135 292 aa10.65□□□□□ -0.7
RAB5B-208ENST00000550283 SERPINB9P50453 376 aa10.65□□□□□ -0.7
RAB5B-208ENST00000550283 RPS15AP62244 130 aaKnown RBP10.65□□□□□ -0.7
RAB5B-208ENST00000550283 CBX1P83916 185 aa10.65□□□□□ -0.7
RAB5B-208ENST00000550283 CDC16Q13042 620 aa10.65□□□□□ -0.7
RAB5B-208ENST00000550283 ATP1A4Q13733 1029 aa10.65□□□□□ -0.7
RAB5B-208ENST00000550283 DOC2AQ14183 400 aa10.65□□□□□ -0.7
RAB5B-208ENST00000550283 SLBPQ14493 270 aaKnown RBP eCLIP10.65□□□□□ -0.7
RAB5B-208ENST00000550283 PFKFB4Q16877 469 aa10.65□□□□□ -0.7
RAB5B-208ENST00000550283 UGT8Q16880 541 aa10.65□□□□□ -0.7
RAB5B-208ENST00000550283 VWA2Q5GFL6 755 aa10.65□□□□□ -0.7
RAB5B-208ENST00000550283 TIFABQ6ZNK6 161 aa10.65□□□□□ -0.7
RAB5B-208ENST00000550283 OVCH1Q7RTY7 1134 aa10.65□□□□□ -0.7
RAB5B-208ENST00000550283 PPP1R32Q7Z5V6 425 aa10.65□□□□□ -0.7
RAB5B-208ENST00000550283 ASPGQ86U10 573 aa10.65□□□□□ -0.7
RAB5B-208ENST00000550283 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.65□□□□□ -0.76e-7■■■■■ 139.2
RAB5B-208ENST00000550283 TTC29Q8NA56 475 aaPredicted RBP10.65□□□□□ -0.7
RAB5B-208ENST00000550283 OR5T3Q8NGG3 340 aa10.65□□□□□ -0.7
RAB5B-208ENST00000550283 STAG3L4Q8TBR4 150 aa10.65□□□□□ -0.7
RAB5B-208ENST00000550283 PROKR1Q8TCW9 393 aa10.65□□□□□ -0.7
RAB5B-208ENST00000550283 CREB3L4Q8TEY5 395 aa10.65□□□□□ -0.7
RAB5B-208ENST00000550283 UBTD2Q8WUN7 234 aa10.65□□□□□ -0.7
RAB5B-208ENST00000550283 NSUN5Q96P11 429 aaKnown RBP10.65□□□□□ -0.7
RAB5B-208ENST00000550283 SARGQ9BW04 601 aa10.65□□□□□ -0.7
RAB5B-208ENST00000550283 GPR87Q9BY21 358 aa10.65□□□□□ -0.7
RAB5B-208ENST00000550283 OCEL1Q9H607 264 aa10.65□□□□□ -0.7
RAB5B-208ENST00000550283 PELI2Q9HAT8 420 aa10.65□□□□□ -0.7
RAB5B-208ENST00000550283 DNAJC11Q9NVH1 559 aa10.65□□□□□ -0.7
RAB5B-208ENST00000550283 NUDT4Q9NZJ9 180 aa10.65□□□□□ -0.7
RAB5B-208ENST00000550283 TMEM216Q9P0N5 145 aa10.65□□□□□ -0.7
RAB5B-208ENST00000550283 CPSF2Q9P2I0 782 aaKnown RBP10.65□□□□□ -0.7
RAB5B-208ENST00000550283 XPR1Q9UBH6 696 aa10.65□□□□□ -0.7
RAB5B-208ENST00000550283 TLK1Q9UKI8 766 aa10.65□□□□□ -0.7
RAB5B-208ENST00000550283 EMCNQ9ULC0 261 aa10.65□□□□□ -0.7
RAB5B-208ENST00000550283 PTRH2Q9Y3E5 179 aaKnown RBP10.65□□□□□ -0.7
RAB5B-208ENST00000550283 KCNMB2Q9Y691 235 aa10.65□□□□□ -0.7
RAB5B-208ENST00000550283 A0A0G2JN53 185 aa10.64□□□□□ -0.71
RAB5B-208ENST00000550283 VSTM2BA6NLU5 285 aa10.64□□□□□ -0.71
RAB5B-208ENST00000550283 ATXN7O15265 892 aaPredicted RBP10.64□□□□□ -0.71
RAB5B-208ENST00000550283 STK16O75716 305 aa10.64□□□□□ -0.71
RAB5B-208ENST00000550283 HBQ1P09105 142 aa10.64□□□□□ -0.71
RAB5B-208ENST00000550283 HNRNPH1P31943 449 aaKnown RBP10.64□□□□□ -0.71
RAB5B-208ENST00000550283 OTX2P32243 289 aa10.64□□□□□ -0.71
RAB5B-208ENST00000550283 HNF4AP41235 474 aa10.64□□□□□ -0.71
RAB5B-208ENST00000550283 ARSFP54793 590 aa10.64□□□□□ -0.71
RAB5B-208ENST00000550283 RPS15P62841 145 aaKnown RBP10.64□□□□□ -0.71
RAB5B-208ENST00000550283 OLR1P78380 273 aa10.64□□□□□ -0.71
RAB5B-208ENST00000550283 ILF2Q12905 390 aaKnown RBP10.64□□□□□ -0.71
RAB5B-208ENST00000550283 SETDB1Q15047 1291 aa10.64□□□□□ -0.71
RAB5B-208ENST00000550283 ACAP2Q15057 778 aa10.64□□□□□ -0.71
RAB5B-208ENST00000550283 TAF1BQ53T94 588 aaPredicted RBP10.64□□□□□ -0.71
RAB5B-208ENST00000550283 HDXQ7Z353 690 aa10.64□□□□□ -0.71
RAB5B-208ENST00000550283 SYVN1Q86TM6 617 aa10.64□□□□□ -0.71
RAB5B-208ENST00000550283 ZC3H7AQ8IWR0 971 aaKnown RBP10.64□□□□□ -0.71
RAB5B-208ENST00000550283 SNX31Q8N9S9 440 aa10.64□□□□□ -0.71
RAB5B-208ENST00000550283 RHEBL1Q8TAI7 183 aa10.64□□□□□ -0.71
RAB5B-208ENST00000550283 SLC13A3Q8WWT9 602 aa10.64□□□□□ -0.71
RAB5B-208ENST00000550283 RERGQ96A58 199 aaPredicted RBP10.64□□□□□ -0.71
RAB5B-208ENST00000550283 MMABQ96EY8 250 aaPredicted RBP10.64□□□□□ -0.71
RAB5B-208ENST00000550283 ACBD3Q9H3P7 528 aa10.64□□□□□ -0.71
RAB5B-208ENST00000550283 ZBTB26Q9HCK0 441 aa10.64□□□□□ -0.71
RAB5B-208ENST00000550283 ZNF304Q9HCX3 659 aa10.64□□□□□ -0.71
RAB5B-208ENST00000550283 HCN3Q9P1Z3 774 aa10.64□□□□□ -0.71
RAB5B-208ENST00000550283 KCND3Q9UK17 655 aa10.64□□□□□ -0.71
RAB5B-208ENST00000550283 DYRK1BQ9Y463 629 aa10.64□□□□□ -0.71
RAB5B-208ENST00000550283 KCNE2Q9Y6J6 123 aa10.64□□□□□ -0.71
RAB5B-208ENST00000550283 ARGFXA6NJG6 315 aa10.63□□□□□ -0.71
RAB5B-208ENST00000550283 ERVH48-1M5A8F1 160 aa10.63□□□□□ -0.71
RAB5B-208ENST00000550283 SOCS6O14544 535 aa10.63□□□□□ -0.71
RAB5B-208ENST00000550283 NDUFS4O43181 175 aa10.63□□□□□ -0.71
RAB5B-208ENST00000550283 SH3BGRLO75368 114 aa10.63□□□□□ -0.71
RAB5B-208ENST00000550283 RDH16O75452 317 aa10.63□□□□□ -0.71
RAB5B-208ENST00000550283 KRT38O76015 456 aa10.63□□□□□ -0.71
RAB5B-208ENST00000550283 SERPIND1P05546 499 aa10.63□□□□□ -0.71
RAB5B-208ENST00000550283 ZNF888P0CJ79 500 aaPredicted RBP10.63□□□□□ -0.71
RAB5B-208ENST00000550283 SMIM10L1P0DMW3 83 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms