RNA–Protein interactions for RNA: ENST00000550208.1

BRF1-216, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-216ENST00000550208 C12orf65Q9H3J6 166 aaKnown RBP21.45■■□□□ 1.02
BRF1-216ENST00000550208 EHD1Q9H4M9 534 aa21.45■■□□□ 1.02
BRF1-216ENST00000550208 PRORYQ9H606 182 aa21.45■■□□□ 1.02
BRF1-216ENST00000550208 NT5DC2Q9H857 520 aa21.45■■□□□ 1.02
BRF1-216ENST00000550208 ZFP69BQ9UJL9 534 aa21.45■■□□□ 1.02
BRF1-216ENST00000550208 KCND3Q9UK17 655 aa21.45■■□□□ 1.02
BRF1-216ENST00000550208 PCDHGA6Q9Y5G7 932 aa21.45■■□□□ 1.02
BRF1-216ENST00000550208 MAU2Q9Y6X3 613 aa21.45■■□□□ 1.02
BRF1-216ENST00000550208 CELSR3Q9NYQ7 3312 aa21.45■■□□□ 1.02
BRF1-216ENST00000550208 EPG5Q9HCE0 2579 aa21.44■■□□□ 1.02
BRF1-216ENST00000550208 CCDC151A5D8V7 595 aa21.44■■□□□ 1.02
BRF1-216ENST00000550208 A8MT66 165 aa21.44■■□□□ 1.02
BRF1-216ENST00000550208 E2F3O00716 465 aa21.44■■□□□ 1.02
BRF1-216ENST00000550208 NKX2-8O15522 239 aa21.44■■□□□ 1.02
BRF1-216ENST00000550208 FOXS1O43638 330 aa21.44■■□□□ 1.02
BRF1-216ENST00000550208 WFS1O76024 890 aa21.44■■□□□ 1.02
BRF1-216ENST00000550208 ONECUT2O95948 504 aa21.44■■□□□ 1.02
BRF1-216ENST00000550208 RAB40ALP0C0E4 278 aa21.44■■□□□ 1.02
BRF1-216ENST00000550208 TAC1P20366 129 aa21.44■■□□□ 1.02
BRF1-216ENST00000550208 PTPN4P29074 926 aa21.44■■□□□ 1.02
BRF1-216ENST00000550208 RPS18P62269 152 aaKnown RBP21.44■■□□□ 1.02
BRF1-216ENST00000550208 RPS15P62841 145 aaKnown RBP21.44■■□□□ 1.02
BRF1-216ENST00000550208 CYP4F2P78329 520 aa21.44■■□□□ 1.02
BRF1-216ENST00000550208 PCDH1Q08174 1060 aa21.44■■□□□ 1.02
BRF1-216ENST00000550208 TBCCQ15814 346 aa21.44■■□□□ 1.02
BRF1-216ENST00000550208 TMIGD1Q6UXZ0 262 aa21.44■■□□□ 1.02
BRF1-216ENST00000550208 GOLGA7Q7Z5G4 137 aa21.44■■□□□ 1.02
BRF1-216ENST00000550208 KRT78Q8N1N4 520 aa21.44■■□□□ 1.02
BRF1-216ENST00000550208 ENDOVQ8N8Q3 282 aaKnown RBP21.44■■□□□ 1.02
BRF1-216ENST00000550208 IFT80Q9P2H3 777 aaPredicted RBP21.44■■□□□ 1.02
BRF1-216ENST00000550208 GRID1Q9ULK0 1009 aa21.44■■□□□ 1.02
BRF1-216ENST00000550208 COPEO14579 308 aa21.43■■□□□ 1.02
BRF1-216ENST00000550208 PWP1Q13610 501 aa21.43■■□□□ 1.02
BRF1-216ENST00000550208 E2F2Q14209 437 aa21.43■■□□□ 1.02
BRF1-216ENST00000550208 NDUFA9Q16795 377 aa21.43■■□□□ 1.02
BRF1-216ENST00000550208 KRT71Q3SY84 523 aa21.43■■□□□ 1.02
BRF1-216ENST00000550208 FAM69BQ5VUD6 431 aa21.43■■□□□ 1.02
BRF1-216ENST00000550208 TMEM214Q6NUQ4 689 aaKnown RBP21.43■■□□□ 1.02
BRF1-216ENST00000550208 METTL2BQ6P1Q9 378 aaKnown RBP21.43■■□□□ 1.02
BRF1-216ENST00000550208 ZSCAN1Q8NBB4 408 aa21.43■■□□□ 1.02
BRF1-216ENST00000550208 NT5CQ8TCD5 201 aa21.43■■□□□ 1.02
BRF1-216ENST00000550208 CREB3L4Q8TEY5 395 aa21.43■■□□□ 1.02
BRF1-216ENST00000550208 STARD8Q92502 1023 aa21.43■■□□□ 1.02
BRF1-216ENST00000550208 COL26A1Q96A83 441 aa21.43■■□□□ 1.02
BRF1-216ENST00000550208 NSUN5Q96P11 429 aaKnown RBP21.43■■□□□ 1.02
BRF1-216ENST00000550208 IPPKQ9H8X2 491 aa21.43■■□□□ 1.02
BRF1-216ENST00000550208 ZNF304Q9HCX3 659 aa21.43■■□□□ 1.02
BRF1-216ENST00000550208 ACSS2Q9NR19 701 aa21.43■■□□□ 1.02
BRF1-216ENST00000550208 COPG2Q9UBF2 871 aa21.43■■□□□ 1.02
BRF1-216ENST00000550208 GPN3Q9UHW5 284 aaPredicted RBP21.43■■□□□ 1.02
BRF1-216ENST00000550208 PTPRQQ9UMZ3 2332 aa21.43■■□□□ 1.02
BRF1-216ENST00000550208 ZZEF1O43149 2961 aa21.42■■□□□ 1.02
BRF1-216ENST00000550208 A0A0A6YYC8 382 aaPredicted RBP21.42■■□□□ 1.02
BRF1-216ENST00000550208 C9J4A7 227 aa21.42■■□□□ 1.02
BRF1-216ENST00000550208 I3L1I5 382 aaPredicted RBP21.42■■□□□ 1.02
BRF1-216ENST00000550208 NDUFS4O43181 175 aa21.42■■□□□ 1.02
BRF1-216ENST00000550208 CNOT3O75175 753 aaKnown RBP21.42■■□□□ 1.02
BRF1-216ENST00000550208 PROCP04070 461 aa21.42■■□□□ 1.02
BRF1-216ENST00000550208 PIM1P11309 404 aaPredicted RBP21.42■■□□□ 1.02
BRF1-216ENST00000550208 ATP5F1P24539 256 aaPredicted RBP21.42■■□□□ 1.02
BRF1-216ENST00000550208 LAPTM5Q13571 262 aa21.42■■□□□ 1.02
BRF1-216ENST00000550208 FAM53BQ14153 422 aa21.42■■□□□ 1.02
BRF1-216ENST00000550208 NCF4Q15080 339 aa21.42■■□□□ 1.02
BRF1-216ENST00000550208 HIST2H2ACQ16777 129 aaPredicted RBP21.42■■□□□ 1.02
BRF1-216ENST00000550208 HIST2H2AA3Q6FI13 130 aa21.42■■□□□ 1.02
BRF1-216ENST00000550208 PRMT9Q6P2P2 845 aa21.42■■□□□ 1.02
BRF1-216ENST00000550208 RPS27LQ71UM5 84 aaKnown RBP21.42■■□□□ 1.02
BRF1-216ENST00000550208 COX15Q7KZN9 410 aa21.42■■□□□ 1.02
BRF1-216ENST00000550208 OVCH1Q7RTY7 1134 aa21.42■■□□□ 1.02
BRF1-216ENST00000550208 TMEM151BQ8IW70 566 aa21.42■■□□□ 1.02
BRF1-216ENST00000550208 SRRM1Q8IYB3 904 aaKnown RBP21.42■■□□□ 1.02
BRF1-216ENST00000550208 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP21.42■■□□□ 1.02
BRF1-216ENST00000550208 TRPV3Q8NET8 790 aa21.42■■□□□ 1.02
BRF1-216ENST00000550208 ZCCHC10Q8TBK6 192 aa21.42■■□□□ 1.02
BRF1-216ENST00000550208 EFCAB11Q9BUY7 163 aa21.42■■□□□ 1.02
BRF1-216ENST00000550208 PITHD1Q9GZP4 211 aaPredicted RBP21.42■■□□□ 1.02
BRF1-216ENST00000550208 ACTL8Q9H568 366 aa21.42■■□□□ 1.02
BRF1-216ENST00000550208 NOL11Q9H8H0 719 aaKnown RBP21.42■■□□□ 1.02
BRF1-216ENST00000550208 PCTPQ9UKL6 214 aa21.42■■□□□ 1.02
BRF1-216ENST00000550208 CDC14AQ9UNH5 594 aa21.42■■□□□ 1.02
BRF1-216ENST00000550208 ZNF891A8MT65 544 aaPredicted RBP21.41■■□□□ 1.02
BRF1-216ENST00000550208 OR7A17O14581 309 aa21.41■■□□□ 1.02
BRF1-216ENST00000550208 CTIFO43310 598 aaKnown RBP21.41■■□□□ 1.02
BRF1-216ENST00000550208 PLIN3O60664 434 aa21.41■■□□□ 1.02
BRF1-216ENST00000550208 CREG1O75629 220 aa21.41■■□□□ 1.02
BRF1-216ENST00000550208 SLC35G6P0C7Q6 338 aa21.41■■□□□ 1.02
BRF1-216ENST00000550208 CREB1P16220 341 aa21.41■■□□□ 1.02
BRF1-216ENST00000550208 FOXL2P58012 376 aa21.41■■□□□ 1.02
BRF1-216ENST00000550208 HYAL2Q12891 473 aa21.41■■□□□ 1.02
BRF1-216ENST00000550208 PAGE2BQ5JRK9 111 aa21.41■■□□□ 1.02
BRF1-216ENST00000550208 CEP85LQ5SZL2 805 aa21.41■■□□□ 1.02
BRF1-216ENST00000550208 ADNP2Q6IQ32 1131 aa21.41■■□□□ 1.02
BRF1-216ENST00000550208 MRPL14Q6P1L8 145 aaKnown RBP21.41■■□□□ 1.02
BRF1-216ENST00000550208 PRSS41Q7RTY9 318 aa21.41■■□□□ 1.02
BRF1-216ENST00000550208 BANPQ8N9N5 519 aa21.41■■□□□ 1.02
BRF1-216ENST00000550208 OR9A4Q8NGU2 314 aa21.41■■□□□ 1.02
BRF1-216ENST00000550208 SNRNP27Q8WVK2 155 aaKnown RBP21.41■■□□□ 1.02
BRF1-216ENST00000550208 MMABQ96EY8 250 aaPredicted RBP21.41■■□□□ 1.02
BRF1-216ENST00000550208 DRC3Q9H069 523 aa21.41■■□□□ 1.02
BRF1-216ENST00000550208 KLHL31Q9H511 634 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms