RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 AGAP11Q8TF27 550 aa9.28□□□□□ -0.92
TRAFD1-207ENST00000550051 CHTF18Q8WVB6 975 aa9.28□□□□□ -0.92
TRAFD1-207ENST00000550051 PRAP1Q96NZ9 151 aa9.28□□□□□ -0.92
TRAFD1-207ENST00000550051 HES7Q9BYE0 225 aa9.28□□□□□ -0.92
TRAFD1-207ENST00000550051 FAM129AQ9BZQ8 928 aa9.28□□□□□ -0.92
TRAFD1-207ENST00000550051 TRIM5Q9C035 493 aa9.28□□□□□ -0.92
TRAFD1-207ENST00000550051 TRIM45Q9H8W5 580 aaPredicted RBP9.28□□□□□ -0.92
TRAFD1-207ENST00000550051 KLHL1Q9NR64 748 aa9.28□□□□□ -0.92
TRAFD1-207ENST00000550051 BFARQ9NZS9 450 aa9.28□□□□□ -0.92
TRAFD1-207ENST00000550051 TSR3Q9UJK0 312 aaKnown RBP9.28□□□□□ -0.92
TRAFD1-207ENST00000550051 CRYL1Q9Y2S2 319 aa9.28□□□□□ -0.92
TRAFD1-207ENST00000550051 ASB1Q9Y576 335 aa9.28□□□□□ -0.92
TRAFD1-207ENST00000550051 OR2W5A6NFC9 320 aa9.27□□□□□ -0.93
TRAFD1-207ENST00000550051 MAGEB17A8MXT2 336 aa9.27□□□□□ -0.93
TRAFD1-207ENST00000550051 PRRG2O14669 202 aa9.27□□□□□ -0.93
TRAFD1-207ENST00000550051 HAT1O14929 419 aa9.27□□□□□ -0.93
TRAFD1-207ENST00000550051 FTCDO95954 541 aa9.27□□□□□ -0.93
TRAFD1-207ENST00000550051 ABOP16442 354 aa9.27□□□□□ -0.93
TRAFD1-207ENST00000550051 XCR1P46094 333 aa9.27□□□□□ -0.93
TRAFD1-207ENST00000550051 CLCN7P51798 805 aa9.27□□□□□ -0.93
TRAFD1-207ENST00000550051 RPS15AP62244 130 aaKnown RBP9.27□□□□□ -0.93
TRAFD1-207ENST00000550051 MPP1Q00013 466 aa9.27□□□□□ -0.93
TRAFD1-207ENST00000550051 CDK16Q00536 496 aa9.27□□□□□ -0.93
TRAFD1-207ENST00000550051 TSTA3Q13630 321 aaPredicted RBP9.27□□□□□ -0.93
TRAFD1-207ENST00000550051 KCNJ11Q14654 390 aa9.27□□□□□ -0.93
TRAFD1-207ENST00000550051 RPS6KA1Q15418 735 aa9.27□□□□□ -0.93
TRAFD1-207ENST00000550051 NSDHLQ15738 373 aa9.27□□□□□ -0.93
TRAFD1-207ENST00000550051 MINDY4Q4G0A6 757 aa9.27□□□□□ -0.93
TRAFD1-207ENST00000550051 PRSS41Q7RTY9 318 aa9.27□□□□□ -0.93
TRAFD1-207ENST00000550051 GALNTL5Q7Z4T8 443 aa9.27□□□□□ -0.93
TRAFD1-207ENST00000550051 VN1R4Q7Z5H5 301 aa9.27□□□□□ -0.93
TRAFD1-207ENST00000550051 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.27□□□□□ -0.93
TRAFD1-207ENST00000550051 SLC13A5Q86YT5 568 aaPredicted RBP9.27□□□□□ -0.93
TRAFD1-207ENST00000550051 REXO1L1PQ8IX06 675 aa9.27□□□□□ -0.93
TRAFD1-207ENST00000550051 SHISA5Q8N114 240 aa9.27□□□□□ -0.93
TRAFD1-207ENST00000550051 CCDC89Q8N998 374 aa9.27□□□□□ -0.93
TRAFD1-207ENST00000550051 RNF214Q8ND24 703 aa9.27□□□□□ -0.93
TRAFD1-207ENST00000550051 PPFIBP2Q8ND30 876 aa9.27□□□□□ -0.93
TRAFD1-207ENST00000550051 ELP5Q8TE02 316 aa9.27□□□□□ -0.93
TRAFD1-207ENST00000550051 C1orf54Q8WWF1 131 aa9.27□□□□□ -0.93
TRAFD1-207ENST00000550051 KCTD12Q96CX2 325 aaKnown RBP9.27□□□□□ -0.93
TRAFD1-207ENST00000550051 MFSD3Q96ES6 412 aa9.27□□□□□ -0.93
TRAFD1-207ENST00000550051 LPAR4Q99677 370 aa9.27□□□□□ -0.93
TRAFD1-207ENST00000550051 ANKRD10Q9NXR5 420 aa9.27□□□□□ -0.93
TRAFD1-207ENST00000550051 LRFN1Q9P244 771 aa9.27□□□□□ -0.93
TRAFD1-207ENST00000550051 SLC22A7Q9Y694 548 aa9.27□□□□□ -0.93
TRAFD1-207ENST00000550051 GABRR3A8MPY1 467 aa9.26□□□□□ -0.93
TRAFD1-207ENST00000550051 FANCGO15287 622 aa9.26□□□□□ -0.93
TRAFD1-207ENST00000550051 ZBTB14O43829 449 aa9.26□□□□□ -0.93
TRAFD1-207ENST00000550051 MAN1A2O60476 641 aa9.26□□□□□ -0.93
TRAFD1-207ENST00000550051 TSPAN12O95859 305 aa9.26□□□□□ -0.93
TRAFD1-207ENST00000550051 ZSCAN5DPP0CG00 497 aa9.26□□□□□ -0.93
TRAFD1-207ENST00000550051 MPC1LP0DKB6 136 aa9.26□□□□□ -0.93
TRAFD1-207ENST00000550051 CD1EP15812 388 aa9.26□□□□□ -0.93
TRAFD1-207ENST00000550051 IGFBP2P18065 325 aa9.26□□□□□ -0.93
TRAFD1-207ENST00000550051 OGNP20774 298 aaKnown RBP9.26□□□□□ -0.93
TRAFD1-207ENST00000550051 RHAGQ02094 409 aa9.26□□□□□ -0.93
TRAFD1-207ENST00000550051 OC90Q02509 493 aaPredicted RBP9.26□□□□□ -0.93
TRAFD1-207ENST00000550051 ACTN3Q08043 901 aaPredicted RBP9.26□□□□□ -0.93
TRAFD1-207ENST00000550051 KIF5AQ12840 1032 aa9.26□□□□□ -0.93
TRAFD1-207ENST00000550051 SNX1Q13596 522 aa9.26□□□□□ -0.93
TRAFD1-207ENST00000550051 CCNG2Q16589 344 aa9.26□□□□□ -0.93
TRAFD1-207ENST00000550051 MAPKAPK3Q16644 382 aa9.26□□□□□ -0.93
TRAFD1-207ENST00000550051 TTLL9Q3SXZ7 439 aa9.26□□□□□ -0.93
TRAFD1-207ENST00000550051 SFT2D3Q587I9 215 aa9.26□□□□□ -0.93
TRAFD1-207ENST00000550051 RNFT1Q5M7Z0 435 aa9.26□□□□□ -0.93
TRAFD1-207ENST00000550051 MFSD4BQ5TF39 518 aa9.26□□□□□ -0.93
TRAFD1-207ENST00000550051 DRICH1Q6PGQ1 229 aaPredicted RBP9.26□□□□□ -0.93
TRAFD1-207ENST00000550051 PAPD4Q6PIY7 484 aaKnown RBP9.26□□□□□ -0.93
TRAFD1-207ENST00000550051 MEX3BQ6ZN04 569 aaKnown RBP9.26□□□□□ -0.93
TRAFD1-207ENST00000550051 CENPUQ71F23 418 aa9.26□□□□□ -0.93
TRAFD1-207ENST00000550051 ADCK2Q7Z695 626 aa9.26□□□□□ -0.93
TRAFD1-207ENST00000550051 FGD2Q7Z6J4 655 aa9.26□□□□□ -0.93
TRAFD1-207ENST00000550051 KIAA1328Q86T90 577 aa9.26□□□□□ -0.93
TRAFD1-207ENST00000550051 RPS19BP1Q86WX3 136 aaKnown RBP9.26□□□□□ -0.93
TRAFD1-207ENST00000550051 ZNF227Q86WZ6 799 aa9.26□□□□□ -0.93
TRAFD1-207ENST00000550051 CILP2Q8IUL8 1156 aa9.26□□□□□ -0.93
TRAFD1-207ENST00000550051 PLD3Q8IV08 490 aa9.26□□□□□ -0.93
TRAFD1-207ENST00000550051 ARMC10Q8N2F6 343 aa9.26□□□□□ -0.93
TRAFD1-207ENST00000550051 RNF10Q8N5U6 811 aaKnown RBP9.26□□□□□ -0.93
TRAFD1-207ENST00000550051 POGLUT1Q8NBL1 392 aa9.26□□□□□ -0.93
TRAFD1-207ENST00000550051 CAMKVQ8NCB2 501 aa9.26□□□□□ -0.93
TRAFD1-207ENST00000550051 ACRBPQ8NEB7 543 aa9.26□□□□□ -0.93
TRAFD1-207ENST00000550051 LILRB4Q8NHJ6 448 aa9.26□□□□□ -0.93
TRAFD1-207ENST00000550051 CA5BP1Q8WTZ4 195 aa9.26□□□□□ -0.93
TRAFD1-207ENST00000550051 FAM136AQ96C01 138 aa9.26□□□□□ -0.93
TRAFD1-207ENST00000550051 OR1F2PQ96R84 312 aa9.26□□□□□ -0.93
TRAFD1-207ENST00000550051 TSGA10Q9BZW7 698 aa9.26□□□□□ -0.93
TRAFD1-207ENST00000550051 PCBD2Q9H0N5 130 aa9.26□□□□□ -0.93
TRAFD1-207ENST00000550051 TSPAN10Q9H1Z9 355 aaPredicted RBP9.26□□□□□ -0.93
TRAFD1-207ENST00000550051 CDCP1Q9H5V8 836 aa9.26□□□□□ -0.93
TRAFD1-207ENST00000550051 ANKHQ9HCJ1 492 aa9.26□□□□□ -0.93
TRAFD1-207ENST00000550051 INTS10Q9NVR2 710 aaKnown RBP9.26□□□□□ -0.93
TRAFD1-207ENST00000550051 COQ3Q9NZJ6 369 aa9.26□□□□□ -0.93
TRAFD1-207ENST00000550051 TNFRSF10DQ9UBN6 386 aa9.26□□□□□ -0.93
TRAFD1-207ENST00000550051 SOX13Q9UN79 622 aa9.26□□□□□ -0.93
TRAFD1-207ENST00000550051 DHRS7Q9Y394 339 aa9.26□□□□□ -0.93
TRAFD1-207ENST00000550051 FOXO6A8MYZ6 492 aa9.25□□□□□ -0.93
TRAFD1-207ENST00000550051 GOLGA8KD6RF30 607 aa9.25□□□□□ -0.93
TRAFD1-207ENST00000550051 E5RI56 91 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms