RNA–Protein interactions for RNA: ENST00000549891.5

TROAP-211, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 932 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-211ENST00000549891 LRRC56Q8IYG6 542 aaPredicted RBP12.8□□□□□ -0.36
TROAP-211ENST00000549891 EID3Q8N140 333 aa12.8□□□□□ -0.36
TROAP-211ENST00000549891 MTFMTQ96DP5 389 aaKnown RBP12.8□□□□□ -0.36
TROAP-211ENST00000549891 SCMH1Q96GD3 660 aa12.8□□□□□ -0.36
TROAP-211ENST00000549891 SIGLEC12Q96PQ1 595 aa12.8□□□□□ -0.36
TROAP-211ENST00000549891 OR1F2PQ96R84 312 aa12.8□□□□□ -0.36
TROAP-211ENST00000549891 LPAR4Q99677 370 aa12.8□□□□□ -0.36
TROAP-211ENST00000549891 SLC30A3Q99726 388 aa12.8□□□□□ -0.36
TROAP-211ENST00000549891 TRIM8Q9BZR9 551 aa12.8□□□□□ -0.36
TROAP-211ENST00000549891 KLHL1Q9NR64 748 aa12.8□□□□□ -0.36
TROAP-211ENST00000549891 HCN3Q9P1Z3 774 aa12.8□□□□□ -0.36
TROAP-211ENST00000549891 DHRS7Q9Y394 339 aa12.8□□□□□ -0.36
TROAP-211ENST00000549891 F8P00451 2351 aa12.8□□□□□ -0.36
TROAP-211ENST00000549891 CELSR1Q9NYQ6 3014 aa12.8□□□□□ -0.36
TROAP-211ENST00000549891 C2CD3Q4AC94 2353 aa12.79□□□□□ -0.36
TROAP-211ENST00000549891 AKAP9Q99996 3911 aa12.79□□□□□ -0.36
TROAP-211ENST00000549891 TCRBV7S3A2A0A539 114 aa12.79□□□□□ -0.36
TROAP-211ENST00000549891 ASPDHA6ND91 283 aa12.79□□□□□ -0.36
TROAP-211ENST00000549891 SGK494L7N484 410 aa12.79□□□□□ -0.36
TROAP-211ENST00000549891 AVILO75366 819 aa12.79□□□□□ -0.36
TROAP-211ENST00000549891 FGGP02679 453 aa12.79□□□□□ -0.36
TROAP-211ENST00000549891 STATHP02808 62 aa12.79□□□□□ -0.36
TROAP-211ENST00000549891 SLC35G6P0C7Q6 338 aa12.79□□□□□ -0.36
TROAP-211ENST00000549891 MLNP12872 115 aa12.79□□□□□ -0.36
TROAP-211ENST00000549891 ABOP16442 354 aa12.79□□□□□ -0.36
TROAP-211ENST00000549891 KCNJ1P48048 391 aa12.79□□□□□ -0.36
TROAP-211ENST00000549891 SKP1P63208 163 aa12.79□□□□□ -0.36
TROAP-211ENST00000549891 OC90Q02509 493 aaPredicted RBP12.79□□□□□ -0.36
TROAP-211ENST00000549891 ABRAXAS2Q15018 415 aa12.79□□□□□ -0.36
TROAP-211ENST00000549891 NSDHLQ15738 373 aa12.79□□□□□ -0.36
TROAP-211ENST00000549891 SFT2D3Q587I9 215 aa12.79□□□□□ -0.36
TROAP-211ENST00000549891 UGT3A1Q6NUS8 523 aa12.79□□□□□ -0.36
TROAP-211ENST00000549891 PAPD4Q6PIY7 484 aaKnown RBP12.79□□□□□ -0.36
TROAP-211ENST00000549891 C17orf64Q86WR6 236 aa12.79□□□□□ -0.36
TROAP-211ENST00000549891 PALM2Q8IXS6 379 aa12.79□□□□□ -0.36
TROAP-211ENST00000549891 LGI4Q8N135 537 aa12.79□□□□□ -0.36
TROAP-211ENST00000549891 GHDCQ8N2G8 530 aa12.79□□□□□ -0.36
TROAP-211ENST00000549891 GIMAP7Q8NHV1 300 aa12.79□□□□□ -0.36
TROAP-211ENST00000549891 CALML6Q8TD86 181 aa12.79□□□□□ -0.36
TROAP-211ENST00000549891 ZNF669Q96BR6 464 aaPredicted RBP12.79□□□□□ -0.36
TROAP-211ENST00000549891 TM4SF19Q96DZ7 209 aa12.79□□□□□ -0.36
TROAP-211ENST00000549891 CCDC138Q96M89 665 aa12.79□□□□□ -0.36
TROAP-211ENST00000549891 FBXO6Q9NRD1 293 aaPredicted RBP12.79□□□□□ -0.36
TROAP-211ENST00000549891 ANKRD10Q9NXR5 420 aa12.79□□□□□ -0.36
TROAP-211ENST00000549891 MEMO1Q9Y316 297 aa12.79□□□□□ -0.36
TROAP-211ENST00000549891 SLC22A7Q9Y694 548 aa12.79□□□□□ -0.36
TROAP-211ENST00000549891 ANKRD17O75179 2603 aaKnown RBP12.79□□□□□ -0.36
TROAP-211ENST00000549891 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.78□□□□□ -0.36
TROAP-211ENST00000549891 SDR42E2A6NKP2 422 aa12.78□□□□□ -0.36
TROAP-211ENST00000549891 GABRR3A8MPY1 467 aa12.78□□□□□ -0.36
TROAP-211ENST00000549891 MAGEB17A8MXT2 336 aa12.78□□□□□ -0.36
TROAP-211ENST00000549891 GOLGA6L6A8MZA4 724 aa12.78□□□□□ -0.36
TROAP-211ENST00000549891 NPIPA5E9PKD4 350 aa12.78□□□□□ -0.36
TROAP-211ENST00000549891 CAPN3P20807 821 aa12.78□□□□□ -0.36
TROAP-211ENST00000549891 MAGEA6P43360 314 aa12.78□□□□□ -0.36
TROAP-211ENST00000549891 CSNK1G2P78368 415 aa12.78□□□□□ -0.36
TROAP-211ENST00000549891 CTBP1Q13363 440 aa12.78□□□□□ -0.36
TROAP-211ENST00000549891 HERC3Q15034 1050 aa12.78□□□□□ -0.36
TROAP-211ENST00000549891 SPINK14Q6IE38 97 aa12.78□□□□□ -0.36
TROAP-211ENST00000549891 CAPN13Q6MZZ7 669 aaPredicted RBP12.78□□□□□ -0.36
TROAP-211ENST00000549891 NIPAL1Q6NVV3 410 aa12.78□□□□□ -0.36
TROAP-211ENST00000549891 CYHR1Q6ZMK1 362 aa12.78□□□□□ -0.36
TROAP-211ENST00000549891 ASPGQ86U10 573 aa12.78□□□□□ -0.36
TROAP-211ENST00000549891 DENND6AQ8IWF6 608 aa12.78□□□□□ -0.36
TROAP-211ENST00000549891 PLPP5Q8NEB5 264 aa12.78□□□□□ -0.36
TROAP-211ENST00000549891 ZCCHC10Q8TBK6 192 aa12.78□□□□□ -0.36
TROAP-211ENST00000549891 CD200R1Q8TD46 325 aa12.78□□□□□ -0.36
TROAP-211ENST00000549891 ADAMTS18Q8TE60 1221 aa12.78□□□□□ -0.36
TROAP-211ENST00000549891 SLC13A3Q8WWT9 602 aa12.78□□□□□ -0.36
TROAP-211ENST00000549891 FRMD6Q96NE9 622 aa12.78□□□□□ -0.36
TROAP-211ENST00000549891 GPR21Q99679 349 aa12.78□□□□□ -0.36
TROAP-211ENST00000549891 RBSNQ9H1K0 784 aa12.78□□□□□ -0.36
TROAP-211ENST00000549891 XAB2Q9HCS7 855 aaKnown RBP12.78□□□□□ -0.36
TROAP-211ENST00000549891 LRFN1Q9P244 771 aa12.78□□□□□ -0.36
TROAP-211ENST00000549891 NPIPA1Q9UND3 350 aa12.78□□□□□ -0.36
TROAP-211ENST00000549891 MED16Q9Y2X0 877 aa12.78□□□□□ -0.36
TROAP-211ENST00000549891 NAALAD2Q9Y3Q0 740 aa12.78□□□□□ -0.36
TROAP-211ENST00000549891 FEZF1A0PJY2 475 aa12.77□□□□□ -0.37
TROAP-211ENST00000549891 OR2W5A6NFC9 320 aa12.77□□□□□ -0.37
TROAP-211ENST00000549891 PRRG2O14669 202 aa12.77□□□□□ -0.37
TROAP-211ENST00000549891 NDC80O14777 642 aa12.77□□□□□ -0.37
TROAP-211ENST00000549891 ASNA1O43681 348 aa12.77□□□□□ -0.37
TROAP-211ENST00000549891 RDH16O75452 317 aa12.77□□□□□ -0.37
TROAP-211ENST00000549891 TSPAN12O95859 305 aa12.77□□□□□ -0.37
TROAP-211ENST00000549891 C8GP07360 202 aa12.77□□□□□ -0.37
TROAP-211ENST00000549891 SP1P08047 785 aa12.77□□□□□ -0.37
TROAP-211ENST00000549891 JAK1P23458 1154 aa12.77□□□□□ -0.37
TROAP-211ENST00000549891 SLC1A2P43004 574 aa12.77□□□□□ -0.37
TROAP-211ENST00000549891 RGS4P49798 205 aa12.77□□□□□ -0.37
TROAP-211ENST00000549891 TERF1P54274 439 aa12.77□□□□□ -0.37
TROAP-211ENST00000549891 OR4D2P58180 307 aa12.77□□□□□ -0.37
TROAP-211ENST00000549891 SNRPNP63162 240 aaKnown RBP12.77□□□□□ -0.37
TROAP-211ENST00000549891 RHAGQ02094 409 aa12.77□□□□□ -0.37
TROAP-211ENST00000549891 GPS1Q13098 491 aa12.77□□□□□ -0.37
TROAP-211ENST00000549891 SP140Q13342 867 aa12.77□□□□□ -0.37
TROAP-211ENST00000549891 USP10Q14694 798 aaKnown RBP12.77□□□□□ -0.37
TROAP-211ENST00000549891 TRIP13Q15645 432 aaPredicted RBP12.77□□□□□ -0.37
TROAP-211ENST00000549891 SLC25A25Q6KCM7 469 aa12.77□□□□□ -0.37
TROAP-211ENST00000549891 ZNF549Q6P9A3 640 aa12.77□□□□□ -0.37
TROAP-211ENST00000549891 PIWIL4Q7Z3Z4 852 aaKnown RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms