RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 OR2W5A6NFC9 320 aa16.42■□□□□ 0.22
CHMP1A-205ENST00000548650 LCMT2O60294 686 aaKnown RBP16.42■□□□□ 0.22
CHMP1A-205ENST00000548650 ICAM2P13598 275 aa16.42■□□□□ 0.22
CHMP1A-205ENST00000548650 IVDP26440 423 aa16.42■□□□□ 0.22
CHMP1A-205ENST00000548650 PGGT1BP53609 377 aa16.42■□□□□ 0.22
CHMP1A-205ENST00000548650 PER3P56645 1201 aa16.42■□□□□ 0.22
CHMP1A-205ENST00000548650 ZNF33BQ06732 778 aa16.42■□□□□ 0.22
CHMP1A-205ENST00000548650 BBS9Q3SYG4 887 aa16.42■□□□□ 0.22
CHMP1A-205ENST00000548650 MFSD4BQ5TF39 518 aa16.42■□□□□ 0.22
CHMP1A-205ENST00000548650 ABHD17BQ5VST6 288 aa16.42■□□□□ 0.22
CHMP1A-205ENST00000548650 PLAG1Q6DJT9 500 aa16.42■□□□□ 0.22
CHMP1A-205ENST00000548650 CPEB2Q7Z5Q1 589 aaKnown RBP16.42■□□□□ 0.22
CHMP1A-205ENST00000548650 PCGF5Q86SE9 256 aa16.42■□□□□ 0.22
CHMP1A-205ENST00000548650 SLC26A11Q86WA9 606 aa16.42■□□□□ 0.22
CHMP1A-205ENST00000548650 PALM2Q8IXS6 379 aa16.42■□□□□ 0.22
CHMP1A-205ENST00000548650 MFSD9Q8NBP5 474 aa16.42■□□□□ 0.22
CHMP1A-205ENST00000548650 ABHD11Q8NFV4 315 aa16.42■□□□□ 0.22
CHMP1A-205ENST00000548650 ALKBH8Q96BT7 664 aaKnown RBP16.42■□□□□ 0.22
CHMP1A-205ENST00000548650 CYTH2Q99418 400 aa16.42■□□□□ 0.22
CHMP1A-205ENST00000548650 RBCK1Q9BYM8 510 aa16.42■□□□□ 0.22
CHMP1A-205ENST00000548650 FAM129AQ9BZQ8 928 aa16.42■□□□□ 0.22
CHMP1A-205ENST00000548650 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.42■□□□□ 0.22
CHMP1A-205ENST00000548650 ANKHQ9HCJ1 492 aa16.42■□□□□ 0.22
CHMP1A-205ENST00000548650 C19orf25Q9UFG5 118 aaPredicted RBP16.42■□□□□ 0.22
CHMP1A-205ENST00000548650 ABCA12Q86UK0 2595 aa16.42■□□□□ 0.22
CHMP1A-205ENST00000548650 ZNF860A6NHJ4 632 aa16.41■□□□□ 0.22
CHMP1A-205ENST00000548650 ZG16O60844 167 aa16.41■□□□□ 0.22
CHMP1A-205ENST00000548650 SLC35G6P0C7Q6 338 aa16.41■□□□□ 0.22
CHMP1A-205ENST00000548650 NPPBP16860 134 aa16.41■□□□□ 0.22
CHMP1A-205ENST00000548650 KCNK10P57789 538 aa16.41■□□□□ 0.22
CHMP1A-205ENST00000548650 CAPN13Q6MZZ7 669 aaPredicted RBP16.41■□□□□ 0.22
CHMP1A-205ENST00000548650 TRMT10BQ6PF06 316 aaKnown RBP16.41■□□□□ 0.22
CHMP1A-205ENST00000548650 ANKRD37Q7Z713 158 aa16.41■□□□□ 0.22
CHMP1A-205ENST00000548650 OR56A3Q8NH54 315 aa16.41■□□□□ 0.22
CHMP1A-205ENST00000548650 SLC13A3Q8WWT9 602 aa16.41■□□□□ 0.22
CHMP1A-205ENST00000548650 PYCR2Q96C36 320 aa16.41■□□□□ 0.22
CHMP1A-205ENST00000548650 OR4K3Q96R72 315 aa16.41■□□□□ 0.22
CHMP1A-205ENST00000548650 OLFM1Q99784 485 aa16.41■□□□□ 0.22
CHMP1A-205ENST00000548650 HAUS8Q9BT25 410 aa16.41■□□□□ 0.22
CHMP1A-205ENST00000548650 SARGQ9BW04 601 aa16.41■□□□□ 0.22
CHMP1A-205ENST00000548650 ARL15Q9NXU5 204 aa16.41■□□□□ 0.22
CHMP1A-205ENST00000548650 NAALAD2Q9Y3Q0 740 aa16.41■□□□□ 0.22
CHMP1A-205ENST00000548650 SLC22A7Q9Y694 548 aa16.41■□□□□ 0.22
CHMP1A-205ENST00000548650 PRAMEF2O60811 474 aa16.4■□□□□ 0.22
CHMP1A-205ENST00000548650 GRK3P35626 688 aa16.4■□□□□ 0.22
CHMP1A-205ENST00000548650 AGTR2P50052 363 aa16.4■□□□□ 0.22
CHMP1A-205ENST00000548650 AP1S2P56377 157 aa16.4■□□□□ 0.22
CHMP1A-205ENST00000548650 IL2P60568 153 aa16.4■□□□□ 0.22
CHMP1A-205ENST00000548650 MEF2AQ02078 507 aaPredicted RBP16.4■□□□□ 0.22
CHMP1A-205ENST00000548650 RHAGQ02094 409 aa16.4■□□□□ 0.22
CHMP1A-205ENST00000548650 PDAP1Q13442 181 aaKnown RBP16.4■□□□□ 0.22
CHMP1A-205ENST00000548650 ZRSR2Q15696 482 aaKnown RBP16.4■□□□□ 0.22
CHMP1A-205ENST00000548650 BTBD16Q32M84 506 aa16.4■□□□□ 0.22
CHMP1A-205ENST00000548650 TEDDM1Q5T9Z0 273 aa16.4■□□□□ 0.22
CHMP1A-205ENST00000548650 HECTD2Q5U5R9 776 aa16.4■□□□□ 0.22
CHMP1A-205ENST00000548650 C1QL3Q5VWW1 255 aa16.4■□□□□ 0.22
CHMP1A-205ENST00000548650 STEAP4Q687X5 459 aa16.4■□□□□ 0.22
CHMP1A-205ENST00000548650 DUPD1Q68J44 220 aa16.4■□□□□ 0.22
CHMP1A-205ENST00000548650 AFAP1L2Q8N4X5 818 aa16.4■□□□□ 0.22
CHMP1A-205ENST00000548650 GPATCH11Q8N954 259 aa16.4■□□□□ 0.22
CHMP1A-205ENST00000548650 OR4K1Q8NGD4 311 aa16.4■□□□□ 0.22
CHMP1A-205ENST00000548650 OR5T3Q8NGG3 340 aa16.4■□□□□ 0.22
CHMP1A-205ENST00000548650 MOCOSQ96EN8 888 aa16.4■□□□□ 0.22
CHMP1A-205ENST00000548650 PWWP2AQ96N64 755 aa16.4■□□□□ 0.22
CHMP1A-205ENST00000548650 SPNS1Q9H2V7 528 aa16.4■□□□□ 0.22
CHMP1A-205ENST00000548650 LANCL2Q9NS86 450 aa16.4■□□□□ 0.22
CHMP1A-205ENST00000548650 ABI3Q9P2A4 366 aa16.4■□□□□ 0.22
CHMP1A-205ENST00000548650 TEKT2Q9UIF3 430 aa16.4■□□□□ 0.22
CHMP1A-205ENST00000548650 IKZF3Q9UKT9 509 aa16.4■□□□□ 0.22
CHMP1A-205ENST00000548650 CORO1CQ9ULV4 474 aaPredicted RBP16.4■□□□□ 0.22
CHMP1A-205ENST00000548650 CHMP2BQ9UQN3 213 aa16.4■□□□□ 0.22
CHMP1A-205ENST00000548650 CREBBPQ92793 2442 aa16.4■□□□□ 0.22
CHMP1A-205ENST00000548650 MYO7BQ6PIF6 2116 aa16.4■□□□□ 0.22
CHMP1A-205ENST00000548650 NDUFS4O43181 175 aa16.39■□□□□ 0.21
CHMP1A-205ENST00000548650 HIST1H2AGP0C0S8 130 aaPredicted RBP16.39■□□□□ 0.21
CHMP1A-205ENST00000548650 HIST1H2ADP20671 130 aa16.39■□□□□ 0.21
CHMP1A-205ENST00000548650 MST1P26927 711 aa16.39■□□□□ 0.21
CHMP1A-205ENST00000548650 ELK3P41970 407 aa16.39■□□□□ 0.21
CHMP1A-205ENST00000548650 CCR8P51685 355 aa16.39■□□□□ 0.21
CHMP1A-205ENST00000548650 MORF4L2Q15014 288 aa16.39■□□□□ 0.21
CHMP1A-205ENST00000548650 HP1BP3Q5SSJ5 553 aaPredicted RBP16.39■□□□□ 0.21
CHMP1A-205ENST00000548650 FCRLBQ6BAA4 426 aa16.39■□□□□ 0.21
CHMP1A-205ENST00000548650 FAM45BPQ6NSW5 357 aa16.39■□□□□ 0.21
CHMP1A-205ENST00000548650 H3F3CQ6NXT2 135 aa16.39■□□□□ 0.21
CHMP1A-205ENST00000548650 SBSNQ6UWP8 590 aa16.39■□□□□ 0.21
CHMP1A-205ENST00000548650 FJX1Q86VR8 437 aa16.39■□□□□ 0.21
CHMP1A-205ENST00000548650 BEST3Q8N1M1 668 aa16.39■□□□□ 0.21
CHMP1A-205ENST00000548650 ZNF740Q8NDX6 193 aa16.39■□□□□ 0.21
CHMP1A-205ENST00000548650 FAM45AQ8TCE6 357 aa16.39■□□□□ 0.21
CHMP1A-205ENST00000548650 TSLPQ969D9 159 aa16.39■□□□□ 0.21
CHMP1A-205ENST00000548650 FBXL8Q96CD0 374 aa16.39■□□□□ 0.21
CHMP1A-205ENST00000548650 CFAP36Q96G28 342 aa16.39■□□□□ 0.21
CHMP1A-205ENST00000548650 SNF8Q96H20 258 aa16.39■□□□□ 0.21
CHMP1A-205ENST00000548650 PEX11GQ96HA9 241 aa16.39■□□□□ 0.21
CHMP1A-205ENST00000548650 HIST1H2AHQ96KK5 128 aa16.39■□□□□ 0.21
CHMP1A-205ENST00000548650 OR1F2PQ96R84 312 aa16.39■□□□□ 0.21
CHMP1A-205ENST00000548650 NPAS2Q99743 824 aa16.39■□□□□ 0.21
CHMP1A-205ENST00000548650 HIST1H2AJQ99878 128 aa16.39■□□□□ 0.21
CHMP1A-205ENST00000548650 H2AFJQ9BTM1 129 aa16.39■□□□□ 0.21
CHMP1A-205ENST00000548650 KCNF1Q9H3M0 494 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms