RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 NHLH1Q02575 133 aa27.53■■■□□ 2
BRF1-213ENST00000548421 NR6A1Q15406 480 aa27.53■■■□□ 2
BRF1-213ENST00000548421 LSM12Q3MHD2 195 aaKnown RBP27.53■■■□□ 2
BRF1-213ENST00000548421 PRSS42Q7Z5A4 293 aa27.53■■■□□ 2
BRF1-213ENST00000548421 THAP11Q96EK4 314 aa27.53■■■□□ 2
BRF1-213ENST00000548421 PHOX2BQ99453 314 aa27.53■■■□□ 2
BRF1-213ENST00000548421 SEMA5BQ9P283 1151 aa27.53■■■□□ 2
BRF1-213ENST00000548421 ZNF292O60281 2723 aa27.53■■■□□ 2
BRF1-213ENST00000548421 LSM1O15116 133 aaKnown RBP27.52■■■□□ 2
BRF1-213ENST00000548421 CLEC3AO75596 197 aa27.52■■■□□ 2
BRF1-213ENST00000548421 RSL1D1O76021 490 aaKnown RBP27.52■■■□□ 2
BRF1-213ENST00000548421 TUBB3Q13509 450 aa27.52■■■□□ 2
BRF1-213ENST00000548421 ATP6AP1LQ52LC2 224 aa27.52■■■□□ 2
BRF1-213ENST00000548421 ASCL5Q7RTU5 278 aa27.52■■■□□ 2
BRF1-213ENST00000548421 ANKS4BQ8N8V4 417 aa27.52■■■□□ 2
BRF1-213ENST00000548421 TRPV3Q8NET8 790 aa27.52■■■□□ 2
BRF1-213ENST00000548421 OR4D9Q8NGE8 314 aa27.52■■■□□ 2
BRF1-213ENST00000548421 FCRL4Q96PJ5 515 aa27.52■■■□□ 2
BRF1-213ENST00000548421 GFM1Q96RP9 751 aaKnown RBP27.52■■■□□ 2
BRF1-213ENST00000548421 CHRNA10Q9GZZ6 450 aa27.52■■■□□ 2
BRF1-213ENST00000548421 SLC12A4Q9UP95 1085 aa27.52■■■□□ 2
BRF1-213ENST00000548421 ZFHX2Q9C0A1 2572 aaPredicted RBP27.52■■■□□ 2
BRF1-213ENST00000548421 A0A0J9YVX5 310 aa27.51■■■□□ 2
BRF1-213ENST00000548421 TOX3O15405 576 aaPredicted RBP27.51■■■□□ 2
BRF1-213ENST00000548421 PRR35P0CG20 571 aa27.51■■■□□ 2
BRF1-213ENST00000548421 PRPH2P23942 346 aa27.51■■■□□ 2
BRF1-213ENST00000548421 ACADVLP49748 655 aa27.51■■■□□ 2
BRF1-213ENST00000548421 SNAP47Q5SQN1 464 aa27.51■■■□□ 2
BRF1-213ENST00000548421 CREB3L4Q8TEY5 395 aa27.51■■■□□ 2
BRF1-213ENST00000548421 CMTM7Q96FZ5 175 aa27.51■■■□□ 2
BRF1-213ENST00000548421 PPP3R2Q96LZ3 170 aa27.51■■■□□ 2
BRF1-213ENST00000548421 OR2A5Q96R48 311 aa27.51■■■□□ 2
BRF1-213ENST00000548421 NMRK1Q9NWW6 199 aa27.51■■■□□ 2
BRF1-213ENST00000548421 SOHLH2Q9NX45 425 aa27.51■■■□□ 2
BRF1-213ENST00000548421 VPS29Q9UBQ0 182 aa27.51■■■□□ 2
BRF1-213ENST00000548421 NPIPB8E9PQR5 432 aa27.51■■□□□ 1.99
BRF1-213ENST00000548421 MAP3K7O43318 606 aa27.51■■□□□ 1.99
BRF1-213ENST00000548421 TGFB1P01137 390 aa27.51■■□□□ 1.99
BRF1-213ENST00000548421 PTX3P26022 381 aaPredicted RBP27.51■■□□□ 1.99
BRF1-213ENST00000548421 MLLT3P42568 568 aaPredicted RBP27.51■■□□□ 1.99
BRF1-213ENST00000548421 GALNTL6Q49A17 601 aa27.51■■□□□ 1.99
BRF1-213ENST00000548421 ZC3H12BQ5HYM0 836 aaKnown RBP27.51■■□□□ 1.99
BRF1-213ENST00000548421 SPDYAQ5MJ70 313 aa27.51■■□□□ 1.99
BRF1-213ENST00000548421 TMPRSS9Q7Z410 1059 aa27.51■■□□□ 1.99
BRF1-213ENST00000548421 KMT5CQ86Y97 462 aa27.51■■□□□ 1.99
BRF1-213ENST00000548421 WDR48Q8TAF3 677 aa27.51■■□□□ 1.99
BRF1-213ENST00000548421 SERPINI1Q99574 410 aa27.51■■□□□ 1.99
BRF1-213ENST00000548421 MS4A8Q9BY19 250 aa27.51■■□□□ 1.99
BRF1-213ENST00000548421 SYNPO2LQ9H987 977 aa27.51■■□□□ 1.99
BRF1-213ENST00000548421 FAM60AQ9NP50 221 aa27.51■■□□□ 1.99
BRF1-213ENST00000548421 PDE7BQ9NP56 450 aa27.51■■□□□ 1.99
BRF1-213ENST00000548421 ZKSCAN7Q9P0L1 754 aaPredicted RBP27.51■■□□□ 1.99
BRF1-213ENST00000548421 GIMAP2Q9UG22 337 aa27.51■■□□□ 1.99
BRF1-213ENST00000548421 E9PBE3 544 aa27.5■■□□□ 1.99
BRF1-213ENST00000548421 NTN3O00634 580 aaPredicted RBP27.5■■□□□ 1.99
BRF1-213ENST00000548421 KLHL41O60662 606 aa27.5■■□□□ 1.99
BRF1-213ENST00000548421 PEX11AO75192 247 aa27.5■■□□□ 1.99
BRF1-213ENST00000548421 ETHE1O95571 254 aa27.5■■□□□ 1.99
BRF1-213ENST00000548421 SERPIND1P05546 499 aa27.5■■□□□ 1.99
BRF1-213ENST00000548421 LBPP18428 481 aa27.5■■□□□ 1.99
BRF1-213ENST00000548421 ZNF574Q6ZN55 896 aaPredicted RBP27.5■■□□□ 1.99
BRF1-213ENST00000548421 PIP4P1Q86T03 277 aa27.5■■□□□ 1.99
BRF1-213ENST00000548421 RERGQ96A58 199 aaPredicted RBP27.5■■□□□ 1.99
BRF1-213ENST00000548421 LRTM1Q9HBL6 345 aa27.5■■□□□ 1.99
BRF1-213ENST00000548421 C1orf109Q9NX04 203 aa27.5■■□□□ 1.99
BRF1-213ENST00000548421 PDP2Q9P2J9 529 aa27.5■■□□□ 1.99
BRF1-213ENST00000548421 HEY2Q9UBP5 337 aa27.5■■□□□ 1.99
BRF1-213ENST00000548421 NDUFS4O43181 175 aa27.49■■□□□ 1.99
BRF1-213ENST00000548421 TBX6O95947 436 aaPredicted RBP27.49■■□□□ 1.99
BRF1-213ENST00000548421 HSD11B2P80365 405 aa27.49■■□□□ 1.99
BRF1-213ENST00000548421 SPIDRQ14159 915 aa27.49■■□□□ 1.99
BRF1-213ENST00000548421 AP5B1Q2VPB7 878 aa27.49■■□□□ 1.99
BRF1-213ENST00000548421 C6orf136Q5SQH8 315 aa27.49■■□□□ 1.99
BRF1-213ENST00000548421 METTL21CQ5VZV1 264 aa27.49■■□□□ 1.99
BRF1-213ENST00000548421 VN1R4Q7Z5H5 301 aa27.49■■□□□ 1.99
BRF1-213ENST00000548421 ASPGQ86U10 573 aa27.49■■□□□ 1.99
BRF1-213ENST00000548421 ALYREFQ86V81 257 aaKnown RBP27.49■■□□□ 1.99
BRF1-213ENST00000548421 DNAJC22Q8N4W6 341 aa27.49■■□□□ 1.99
BRF1-213ENST00000548421 OR51B5Q9H339 312 aa27.49■■□□□ 1.99
BRF1-213ENST00000548421 ZNF768Q9H5H4 540 aaKnown RBP27.49■■□□□ 1.99
BRF1-213ENST00000548421 TRIM33Q9UPN9 1127 aa27.49■■□□□ 1.99
BRF1-213ENST00000548421 ADAMTS20P59510 1910 aa27.48■■□□□ 1.99
BRF1-213ENST00000548421 D6RAR5 112 aa27.48■■□□□ 1.99
BRF1-213ENST00000548421 SH3BGRLO75368 114 aa27.48■■□□□ 1.99
BRF1-213ENST00000548421 ANKRD34CP0C6C1 535 aa27.48■■□□□ 1.99
BRF1-213ENST00000548421 THRAP10827 490 aa27.48■■□□□ 1.99
BRF1-213ENST00000548421 ARL4DP49703 201 aa27.48■■□□□ 1.99
BRF1-213ENST00000548421 LIMK1P53667 647 aa27.48■■□□□ 1.99
BRF1-213ENST00000548421 ILKQ13418 452 aa27.48■■□□□ 1.99
BRF1-213ENST00000548421 CUL3Q13618 768 aa27.48■■□□□ 1.99
BRF1-213ENST00000548421 FRMPD2BQ6IN97 320 aa27.48■■□□□ 1.99
BRF1-213ENST00000548421 OGFOD2Q6N063 350 aa27.48■■□□□ 1.99
BRF1-213ENST00000548421 SLC13A3Q8WWT9 602 aa27.48■■□□□ 1.99
BRF1-213ENST00000548421 KLHL6Q8WZ60 621 aa27.48■■□□□ 1.99
BRF1-213ENST00000548421 RIF1Q5UIP0 2472 aaKnown RBP27.48■■□□□ 1.99
BRF1-213ENST00000548421 IGHV5-10-1A0A0J9YXX1 117 aa27.47■■□□□ 1.99
BRF1-213ENST00000548421 LOC105378220A0A1B0GUY1 285 aaPredicted RBP27.47■■□□□ 1.99
BRF1-213ENST00000548421 A8MU76 341 aa27.47■■□□□ 1.99
BRF1-213ENST00000548421 H0YGG7 62 aa27.47■■□□□ 1.99
BRF1-213ENST00000548421 SEC22BO75396 215 aa27.47■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms