RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 TSFMP43897 325 aaKnown RBP12.9□□□□□ -0.34
PTCH1-215ENST00000547672 PTDSS1P48651 473 aaKnown RBP12.9□□□□□ -0.34
PTCH1-215ENST00000547672 SLC30A9Q6PML9 568 aa12.9□□□□□ -0.34
PTCH1-215ENST00000547672 LRRC74BQ6ZQY2 392 aa12.9□□□□□ -0.34
PTCH1-215ENST00000547672 Q7L0L9 218 aa12.9□□□□□ -0.34
PTCH1-215ENST00000547672 COMMD6Q7Z4G1 85 aa12.9□□□□□ -0.34
PTCH1-215ENST00000547672 ADCK2Q7Z695 626 aa12.9□□□□□ -0.34
PTCH1-215ENST00000547672 TAF8Q7Z7C8 310 aa12.9□□□□□ -0.34
PTCH1-215ENST00000547672 C11orf74Q86VG3 221 aa12.9□□□□□ -0.34
PTCH1-215ENST00000547672 GKN2Q86XP6 184 aa12.9□□□□□ -0.34
PTCH1-215ENST00000547672 C2orf73Q8N5S3 287 aaPredicted RBP12.9□□□□□ -0.34
PTCH1-215ENST00000547672 TRIML2Q8N7C3 387 aa12.9□□□□□ -0.34
PTCH1-215ENST00000547672 PJA1Q8NG27 643 aa12.9□□□□□ -0.34
PTCH1-215ENST00000547672 COQ8BQ96D53 544 aa12.9□□□□□ -0.34
PTCH1-215ENST00000547672 PRAP1Q96NZ9 151 aa12.9□□□□□ -0.34
PTCH1-215ENST00000547672 SPATA9Q9BWV2 254 aa12.9□□□□□ -0.34
PTCH1-215ENST00000547672 YY1AP1Q9H869 796 aa12.9□□□□□ -0.34
PTCH1-215ENST00000547672 EBF2Q9HAK2 575 aa12.9□□□□□ -0.34
PTCH1-215ENST00000547672 CMTM6Q9NX76 183 aa12.9□□□□□ -0.34
PTCH1-215ENST00000547672 NKX1-2Q9UD57 310 aaPredicted RBP12.9□□□□□ -0.34
PTCH1-215ENST00000547672 ICKQ9UPZ9 632 aa12.9□□□□□ -0.34
PTCH1-215ENST00000547672 PCDHB3Q9Y5E6 796 aa12.9□□□□□ -0.34
PTCH1-215ENST00000547672 SNX13Q9Y5W8 968 aa12.9□□□□□ -0.34
PTCH1-215ENST00000547672 DOCK9Q9BZ29 2069 aa12.89□□□□□ -0.35
PTCH1-215ENST00000547672 CCDC163A0A0D9SF12 145 aa12.89□□□□□ -0.35
PTCH1-215ENST00000547672 ASPDHA6ND91 283 aa12.89□□□□□ -0.35
PTCH1-215ENST00000547672 URADA6NGE7 173 aa12.89□□□□□ -0.35
PTCH1-215ENST00000547672 SCAMP2O15127 329 aaKnown RBP12.89□□□□□ -0.35
PTCH1-215ENST00000547672 AXIN1O15169 862 aa12.89□□□□□ -0.35
PTCH1-215ENST00000547672 GSTA4O15217 222 aa12.89□□□□□ -0.35
PTCH1-215ENST00000547672 NVLO15381 856 aaKnown RBP12.89□□□□□ -0.35
PTCH1-215ENST00000547672 CAPN5O15484 640 aaPredicted RBP12.89□□□□□ -0.35
PTCH1-215ENST00000547672 GPIP06744 558 aa12.89□□□□□ -0.35
PTCH1-215ENST00000547672 CHRM5P08912 532 aaPredicted RBP12.89□□□□□ -0.35
PTCH1-215ENST00000547672 ZCCHC18P0CG32 403 aa12.89□□□□□ -0.35
PTCH1-215ENST00000547672 FCGR1AP12314 374 aa12.89□□□□□ -0.35
PTCH1-215ENST00000547672 SLC7A1P30825 629 aa12.89□□□□□ -0.35
PTCH1-215ENST00000547672 HOXA6P31267 233 aa12.89□□□□□ -0.35
PTCH1-215ENST00000547672 SLC19A1P41440 591 aa12.89□□□□□ -0.35
PTCH1-215ENST00000547672 STXBP1P61764 594 aaKnown RBP12.89□□□□□ -0.35
PTCH1-215ENST00000547672 RPS15AP62244 130 aaKnown RBP12.89□□□□□ -0.35
PTCH1-215ENST00000547672 CSNK1G2P78368 415 aa12.89□□□□□ -0.35
PTCH1-215ENST00000547672 MS4A2Q01362 244 aa12.89□□□□□ -0.35
PTCH1-215ENST00000547672 FZD2Q14332 565 aa12.89□□□□□ -0.35
PTCH1-215ENST00000547672 CAPRIN1Q14444 709 aaKnown RBP12.89□□□□□ -0.35
PTCH1-215ENST00000547672 HEPACAMQ14CZ8 416 aa12.89□□□□□ -0.35
PTCH1-215ENST00000547672 PLCL1Q15111 1095 aa12.89□□□□□ -0.35
PTCH1-215ENST00000547672 RUNDC3AQ59EK9 446 aa12.89□□□□□ -0.35
PTCH1-215ENST00000547672 WDR45BQ5MNZ6 344 aa12.89□□□□□ -0.35
PTCH1-215ENST00000547672 CCNYL2Q5T2Q4 361 aa12.89□□□□□ -0.35
PTCH1-215ENST00000547672 LCN8Q6JVE9 175 aa12.89□□□□□ -0.35
PTCH1-215ENST00000547672 ARMC6Q6NXE6 501 aa12.89□□□□□ -0.35
PTCH1-215ENST00000547672 DUS1LQ6P1R4 473 aaKnown RBP12.89□□□□□ -0.35
PTCH1-215ENST00000547672 KRTCAP2Q8N6L1 136 aa12.89□□□□□ -0.35
PTCH1-215ENST00000547672 EFCAB3Q8N7B9 438 aa12.89□□□□□ -0.35
PTCH1-215ENST00000547672 RNF148Q8N7C7 305 aa12.89□□□□□ -0.35
PTCH1-215ENST00000547672 LINC01555Q8NAE3 123 aa12.89□□□□□ -0.35
PTCH1-215ENST00000547672 HIPK4Q8NE63 616 aa12.89□□□□□ -0.35
PTCH1-215ENST00000547672 OR2L3Q8NG85 312 aa12.89□□□□□ -0.35
PTCH1-215ENST00000547672 OR4E2Q8NGC2 313 aa12.89□□□□□ -0.35
PTCH1-215ENST00000547672 DUSP26Q9BV47 211 aa12.89□□□□□ -0.35
PTCH1-215ENST00000547672 MS4A8Q9BY19 250 aa12.89□□□□□ -0.35
PTCH1-215ENST00000547672 ROGDIQ9GZN7 287 aa12.89□□□□□ -0.35
PTCH1-215ENST00000547672 VCXQ9H320 206 aa12.89□□□□□ -0.35
PTCH1-215ENST00000547672 RAD21L1Q9H4I0 556 aa12.89□□□□□ -0.35
PTCH1-215ENST00000547672 TAAR2Q9P1P5 351 aa12.89□□□□□ -0.35
PTCH1-215ENST00000547672 SPASTQ9UBP0 616 aa12.89□□□□□ -0.35
PTCH1-215ENST00000547672 CA5BQ9Y2D0 317 aa12.89□□□□□ -0.35
PTCH1-215ENST00000547672 AP4S1Q9Y587 144 aa12.89□□□□□ -0.35
PTCH1-215ENST00000547672 AP1M2Q9Y6Q5 423 aa12.89□□□□□ -0.35
PTCH1-215ENST00000547672 TRIOBPQ9H2D6 2365 aa12.89□□□□□ -0.35
PTCH1-215ENST00000547672 SZT2Q5T011 3432 aa12.89□□□□□ -0.35
PTCH1-215ENST00000547672 TCRBV3S1A0A5B6 114 aa12.88□□□□□ -0.35
PTCH1-215ENST00000547672 A6NCN8 305 aa12.88□□□□□ -0.35
PTCH1-215ENST00000547672 C2orf74A8MZ97 194 aa12.88□□□□□ -0.35
PTCH1-215ENST00000547672 C9JVG2 144 aa12.88□□□□□ -0.35
PTCH1-215ENST00000547672 TLR4O00206 839 aa12.88□□□□□ -0.35
PTCH1-215ENST00000547672 RNASET2O00584 256 aaKnown RBP12.88□□□□□ -0.35
PTCH1-215ENST00000547672 ZW10O43264 779 aa12.88□□□□□ -0.35
PTCH1-215ENST00000547672 HNRNPRO43390 633 aaKnown RBP12.88□□□□□ -0.35
PTCH1-215ENST00000547672 AKAP10O43572 662 aa12.88□□□□□ -0.35
PTCH1-215ENST00000547672 PEX1O43933 1283 aa12.88□□□□□ -0.35
PTCH1-215ENST00000547672 TBX19O60806 448 aa12.88□□□□□ -0.35
PTCH1-215ENST00000547672 JUNDP17535 347 aa12.88□□□□□ -0.35
PTCH1-215ENST00000547672 TACR1P25103 407 aa12.88□□□□□ -0.35
PTCH1-215ENST00000547672 PSMA4P25789 261 aaKnown RBP12.88□□□□□ -0.35
PTCH1-215ENST00000547672 AK4P27144 223 aaPredicted RBP12.88□□□□□ -0.35
PTCH1-215ENST00000547672 GSK3BP49841 420 aa12.88□□□□□ -0.35
PTCH1-215ENST00000547672 RPL6Q02878 288 aaKnown RBP12.88□□□□□ -0.35
PTCH1-215ENST00000547672 CYP4F3Q08477 520 aa12.88□□□□□ -0.35
PTCH1-215ENST00000547672 C2orf80Q0P641 193 aa12.88□□□□□ -0.35
PTCH1-215ENST00000547672 EIF2B5Q13144 721 aaKnown RBP12.88□□□□□ -0.35
PTCH1-215ENST00000547672 GAS6Q14393 721 aa12.88□□□□□ -0.35
PTCH1-215ENST00000547672 MUM1Q2TAK8 710 aa12.88□□□□□ -0.35
PTCH1-215ENST00000547672 MANEAQ5SRI9 462 aa12.88□□□□□ -0.35
PTCH1-215ENST00000547672 ERICH5Q6P6B1 374 aa12.88□□□□□ -0.35
PTCH1-215ENST00000547672 FKBP9P1Q75LS8 142 aa12.88□□□□□ -0.35
PTCH1-215ENST00000547672 NUDT13Q86X67 352 aa12.88□□□□□ -0.35
PTCH1-215ENST00000547672 KIAA2013Q8IYS2 634 aa12.88□□□□□ -0.35
PTCH1-215ENST00000547672 ZNF655Q8N720 491 aaPredicted RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms