RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 ELP5Q8TE02 316 aa3.98□□□□□ -1.77
SCAF11-210ENST00000547654 SLC38A5Q8WUX1 472 aa3.98□□□□□ -1.77
SCAF11-210ENST00000547654 TMEM255BQ8WV15 326 aa3.98□□□□□ -1.77
SCAF11-210ENST00000547654 SEMA4DQ92854 862 aa3.98□□□□□ -1.77
SCAF11-210ENST00000547654 DAZLQ92904 295 aaKnown RBP3.98□□□□□ -1.77
SCAF11-210ENST00000547654 SLCO4A1Q96BD0 722 aa3.98□□□□□ -1.77
SCAF11-210ENST00000547654 DHX58Q96C10 678 aa3.98□□□□□ -1.77
SCAF11-210ENST00000547654 PGM2Q96G03 612 aa3.98□□□□□ -1.77
SCAF11-210ENST00000547654 APOLD1Q96LR9 279 aa3.98□□□□□ -1.77
SCAF11-210ENST00000547654 RASL10BQ96S79 203 aa3.98□□□□□ -1.77
SCAF11-210ENST00000547654 MTERF1Q99551 399 aaKnown RBP3.98□□□□□ -1.77
SCAF11-210ENST00000547654 SPAG8Q99932 426 aaPredicted RBP3.98□□□□□ -1.77
SCAF11-210ENST00000547654 SLC39A8Q9C0K1 460 aa3.98□□□□□ -1.77
SCAF11-210ENST00000547654 TFB2MQ9H5Q4 396 aaKnown RBP3.98□□□□□ -1.77
SCAF11-210ENST00000547654 TMEM231Q9H6L2 316 aa3.98□□□□□ -1.77
SCAF11-210ENST00000547654 ECT2Q9H8V3 914 aa3.98□□□□□ -1.77
SCAF11-210ENST00000547654 KCNMB3Q9NPA1 279 aa3.98□□□□□ -1.77
SCAF11-210ENST00000547654 PIGVQ9NUD9 493 aa3.98□□□□□ -1.77
SCAF11-210ENST00000547654 DONSONQ9NYP3 566 aa3.98□□□□□ -1.77
SCAF11-210ENST00000547654 PKD2L2Q9NZM6 624 aa3.98□□□□□ -1.77
SCAF11-210ENST00000547654 MYO6Q9UM54 1294 aa3.98□□□□□ -1.77
SCAF11-210ENST00000547654 ZNF510Q9Y2H8 683 aa3.98□□□□□ -1.77
SCAF11-210ENST00000547654 JRKLQ9Y4A0 524 aa3.98□□□□□ -1.77
SCAF11-210ENST00000547654 DDX49Q9Y6V7 483 aaKnown RBP3.98□□□□□ -1.77
SCAF11-210ENST00000547654 CPS1P31327 1500 aa3.98□□□□□ -1.77
SCAF11-210ENST00000547654 A0A1B0GWJ7 208 aa3.97□□□□□ -1.77
SCAF11-210ENST00000547654 A0A1W2PPK0 400 aa3.97□□□□□ -1.77
SCAF11-210ENST00000547654 RPS10-NUDT3A0A1W2PQS6 291 aa3.97□□□□□ -1.77
SCAF11-210ENST00000547654 TMEM129A0AVI4 362 aa3.97□□□□□ -1.77
SCAF11-210ENST00000547654 TMEM150CB9EJG8 249 aa3.97□□□□□ -1.77
SCAF11-210ENST00000547654 PRSS46E5RG02 174 aa3.97□□□□□ -1.77
SCAF11-210ENST00000547654 H0YIG0 161 aa3.97□□□□□ -1.77
SCAF11-210ENST00000547654 J3KR12 359 aa3.97□□□□□ -1.77
SCAF11-210ENST00000547654 SOCS6O14544 535 aa3.97□□□□□ -1.77
SCAF11-210ENST00000547654 SNX3O60493 162 aa3.97□□□□□ -1.77
SCAF11-210ENST00000547654 ZNF432O94892 652 aa3.97□□□□□ -1.77
SCAF11-210ENST00000547654 PRAMEF12O95522 483 aa3.97□□□□□ -1.77
SCAF11-210ENST00000547654 H1F0P07305 194 aaKnown RBP3.97□□□□□ -1.77
SCAF11-210ENST00000547654 MMP10P09238 476 aa3.97□□□□□ -1.77
SCAF11-210ENST00000547654 SMIM18P0DKX4 95 aa3.97□□□□□ -1.77
SCAF11-210ENST00000547654 HNRNPA2B1P22626 353 aaKnown RBP3.97□□□□□ -1.77
SCAF11-210ENST00000547654 AKT2P31751 481 aa3.97□□□□□ -1.77
SCAF11-210ENST00000547654 NSFP46459 744 aaKnown RBP3.97□□□□□ -1.77
SCAF11-210ENST00000547654 RPL21P46778 160 aaKnown RBP3.97□□□□□ -1.77
SCAF11-210ENST00000547654 CNN1P51911 297 aaKnown RBP3.97□□□□□ -1.77
SCAF11-210ENST00000547654 PDX1P52945 283 aa3.97□□□□□ -1.77
SCAF11-210ENST00000547654 COG7P83436 770 aa3.97□□□□□ -1.77
SCAF11-210ENST00000547654 MAT1AQ00266 395 aaKnown RBP3.97□□□□□ -1.77
SCAF11-210ENST00000547654 PNRC1Q12796 327 aaPredicted RBP3.97□□□□□ -1.77
SCAF11-210ENST00000547654 PDZK1IP1Q13113 114 aa3.97□□□□□ -1.77
SCAF11-210ENST00000547654 CHIT1Q13231 466 aa3.97□□□□□ -1.77
SCAF11-210ENST00000547654 GPR18Q14330 331 aa3.97□□□□□ -1.77
SCAF11-210ENST00000547654 KRT31Q15323 416 aa3.97□□□□□ -1.77
SCAF11-210ENST00000547654 IZUMO4Q1ZYL8 232 aa3.97□□□□□ -1.77
SCAF11-210ENST00000547654 AMZ1Q400G9 498 aa3.97□□□□□ -1.77
SCAF11-210ENST00000547654 LDLRAP1Q5SW96 308 aa3.97□□□□□ -1.77
SCAF11-210ENST00000547654 OTUD3Q5T2D3 398 aaPredicted RBP3.97□□□□□ -1.77
SCAF11-210ENST00000547654 AGAP6Q5VW22 663 aa3.97□□□□□ -1.77
SCAF11-210ENST00000547654 PM20D1Q6GTS8 502 aa3.97□□□□□ -1.77
SCAF11-210ENST00000547654 PARM1Q6UWI2 310 aa3.97□□□□□ -1.77
SCAF11-210ENST00000547654 ATG9AQ7Z3C6 839 aa3.97□□□□□ -1.77
SCAF11-210ENST00000547654 ARHGAP24Q8N264 748 aa3.97□□□□□ -1.77
SCAF11-210ENST00000547654 PRR26Q8N8Z3 221 aa3.97□□□□□ -1.77
SCAF11-210ENST00000547654 OR52I2Q8NH67 350 aa3.97□□□□□ -1.77
SCAF11-210ENST00000547654 OR4A16Q8NH70 328 aa3.97□□□□□ -1.77
SCAF11-210ENST00000547654 WFIKKN2Q8TEU8 576 aa3.97□□□□□ -1.77
SCAF11-210ENST00000547654 FCGR1BQ92637 280 aa3.97□□□□□ -1.77
SCAF11-210ENST00000547654 TUBGCP3Q96CW5 907 aa3.97□□□□□ -1.77
SCAF11-210ENST00000547654 TM6SF1Q9BZW5 370 aa3.97□□□□□ -1.77
SCAF11-210ENST00000547654 UBQLN3Q9H347 655 aa3.97□□□□□ -1.77
SCAF11-210ENST00000547654 PLAC1Q9HBJ0 212 aa3.97□□□□□ -1.77
SCAF11-210ENST00000547654 PALMDQ9NP74 551 aa3.97□□□□□ -1.77
SCAF11-210ENST00000547654 SERINC1Q9NRX5 453 aa3.97□□□□□ -1.77
SCAF11-210ENST00000547654 HIF1ANQ9NWT6 349 aa3.97□□□□□ -1.77
SCAF11-210ENST00000547654 TMOD3Q9NYL9 352 aa3.97□□□□□ -1.77
SCAF11-210ENST00000547654 CLIP2Q9UDT6 1046 aa3.97□□□□□ -1.77
SCAF11-210ENST00000547654 SH3GLB1Q9Y371 365 aa3.97□□□□□ -1.77
SCAF11-210ENST00000547654 TMED3Q9Y3Q3 217 aa3.97□□□□□ -1.77
SCAF11-210ENST00000547654 YIPF1Q9Y548 306 aa3.97□□□□□ -1.77
SCAF11-210ENST00000547654 INSL5Q9Y5Q6 135 aa3.97□□□□□ -1.77
SCAF11-210ENST00000547654 PTPRCP08575 1304 aa3.96□□□□□ -1.77
SCAF11-210ENST00000547654 MYO3AQ8NEV4 1616 aa3.96□□□□□ -1.78
SCAF11-210ENST00000547654 A0A087WYN8 130 aa3.96□□□□□ -1.78
SCAF11-210ENST00000547654 A0A1W2PP11 408 aa3.96□□□□□ -1.78
SCAF11-210ENST00000547654 FAM230AA0A1W2PPH8 454 aa3.96□□□□□ -1.78
SCAF11-210ENST00000547654 MAGEB16A2A368 324 aa3.96□□□□□ -1.78
SCAF11-210ENST00000547654 SLC15A5A6NIM6 579 aa3.96□□□□□ -1.78
SCAF11-210ENST00000547654 ANKRD66B4E2M5 251 aa3.96□□□□□ -1.78
SCAF11-210ENST00000547654 SGK1O00141 431 aa3.96□□□□□ -1.78
SCAF11-210ENST00000547654 RGS14O43566 566 aa3.96□□□□□ -1.78
SCAF11-210ENST00000547654 MTX2O75431 263 aa3.96□□□□□ -1.78
SCAF11-210ENST00000547654 ATP6AP2O75787 350 aa3.96□□□□□ -1.78
SCAF11-210ENST00000547654 CH25HO95992 272 aa3.96□□□□□ -1.78
SCAF11-210ENST00000547654 KRT8P05787 483 aa3.96□□□□□ -1.78
SCAF11-210ENST00000547654 EPB41P11171 864 aaKnown RBP3.96□□□□□ -1.78
SCAF11-210ENST00000547654 NAGAP17050 411 aa3.96□□□□□ -1.78
SCAF11-210ENST00000547654 GNLYP22749 145 aa3.96□□□□□ -1.78
SCAF11-210ENST00000547654 GLRA2P23416 452 aa3.96□□□□□ -1.78
SCAF11-210ENST00000547654 ELAVL4P26378 380 aaKnown RBP3.96□□□□□ -1.78
SCAF11-210ENST00000547654 SSTR1P30872 391 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms